FFCP PHASE1:Hg19::chr1:85741967..85742000,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=646626 | |EntrezGene=646626 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-40bp_to_NR_045484_5end | |association_with_transcript=-40bp_to_NR_045484_5end | ||
|cluster_id=chr1:85741967..85742000,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_LOC646626_5end | |description=CAGE_peak_1_at_LOC646626_5end | ||
|id=chr1:85741967..85742000,+ | |id=chr1:85741967..85742000,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.19e-27!42;CL:0000860!4.02e-26!45;CL:0000557!7.18e-23!71;CL:0002009!7.40e-23!65;CL:0000766!2.66e-22!76;CL:0002194!8.66e-22!63;CL:0000576!8.66e-22!63;CL:0000040!8.66e-22!63;CL:0000559!8.66e-22!63;CL:0000839!1.59e-19!70;CL:0000063!4.01e-18!578;CL:0000012!2.97e-15!682;CL:0000548!1.07e-14!679;CL:0000004!1.07e-14!679;CL:0000255!1.07e-14!679;CL:0000144!1.31e-11!625;CL:0000763!4.36e-11!112;CL:0000049!4.36e-11!112;CL:0002371!5.84e-11!591;CL:0000003!2.44e-09!722;CL:0000738!3.86e-09!140;CL:0002087!6.09e-08!119;CL:0002031!2.03e-07!124 | |ontology_enrichment_celltype=CL:0002057!2.19e-27!42;CL:0000860!4.02e-26!45;CL:0000557!7.18e-23!71;CL:0002009!7.40e-23!65;CL:0000766!2.66e-22!76;CL:0002194!8.66e-22!63;CL:0000576!8.66e-22!63;CL:0000040!8.66e-22!63;CL:0000559!8.66e-22!63;CL:0000839!1.59e-19!70;CL:0000063!4.01e-18!578;CL:0000012!2.97e-15!682;CL:0000548!1.07e-14!679;CL:0000004!1.07e-14!679;CL:0000255!1.07e-14!679;CL:0000144!1.31e-11!625;CL:0000763!4.36e-11!112;CL:0000049!4.36e-11!112;CL:0002371!5.84e-11!591;CL:0000003!2.44e-09!722;CL:0000738!3.86e-09!140;CL:0002087!6.09e-08!119;CL:0002031!2.03e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.54e-30;33!CL:0002057;2.54e-30;33!CL:0000576;3.86e-24;48!CL:0000473;3.05e-22;39!CL:0000234;3.05e-22;39!CL:0000766;1.46e-15;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.85e-40,42;CL:0002057,2.85e-40,42;CL:0000473,3.68e-36,48;CL:0000234,3.68e-36,48;CL:0002009,4.18e-36,61;CL:0002194,1.83e-34,59;CL:0000576,1.83e-34,59;CL:0000040,1.83e-34,59;CL:0000559,1.83e-34,59;CL:0000766,2.49e-34,72;CL:0000557,5.44e-34,67;CL:0000839,4.43e-30,66;CL:0000763,1.77e-19,108;CL:0000049,1.77e-19,108;CL:0000738,1.32e-15,136;CL:0002087,5.36e-14,115;CL:0002031,1.07e-12,120;CL:0000037,2.43e-10,168;CL:0000988,1.69e-09,177;CL:0002032,5.46e-09,161;CL:0000837,5.46e-09,161;CL:0002393,1.45e-08,9;CL:0002397,1.45e-08,9;CL:0000134,3.47e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;4.92e-29;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.38e-22!80;UBERON:0001474!4.80e-21!86;UBERON:0004765!1.79e-19!101;UBERON:0001434!1.79e-19!101;UBERON:0002193!1.29e-15!112;UBERON:0002390!3.30e-15!102;UBERON:0003061!3.30e-15!102;UBERON:0002405!4.02e-15!115;UBERON:0003081!6.31e-11!216;UBERON:0000926!1.47e-10!448;UBERON:0004120!1.47e-10!448;UBERON:0006603!1.47e-10!448;UBERON:0002204!5.50e-10!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.06e-31,76;UBERON:0001474,1.01e-28,82;UBERON:0002405,1.43e-27,93;UBERON:0004765,5.10e-26,90;UBERON:0002193,3.17e-25,108;UBERON:0002390,4.67e-25,98;UBERON:0003061,4.67e-25,98;UBERON:0001434,2.30e-23,100;UBERON:0003081,5.00e-17,203;UBERON:0000926,3.17e-13,315;UBERON:0004120,3.17e-13,315;UBERON:0006603,3.17e-13,315;UBERON:0002204,1.31e-12,167 | |||
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| ||
|short_description=p1@LOC646626 | |short_description=p1@LOC646626 | ||
}} | }} |
Latest revision as of 12:54, 19 September 2015
Short description: | p1@LOC646626 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC646626_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -40bp_to_NR_045484_5end |
EntrezGene: | LOC646626 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.85e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.85e-40 | 42 |
defensive cell | 3.68e-36 | 48 |
phagocyte | 3.68e-36 | 48 |
macrophage dendritic cell progenitor | 4.18e-36 | 61 |
monopoietic cell | 1.83e-34 | 59 |
monocyte | 1.83e-34 | 59 |
monoblast | 1.83e-34 | 59 |
promonocyte | 1.83e-34 | 59 |
myeloid leukocyte | 2.49e-34 | 72 |
granulocyte monocyte progenitor cell | 5.44e-34 | 67 |
myeloid lineage restricted progenitor cell | 4.43e-30 | 66 |
myeloid cell | 1.77e-19 | 108 |
common myeloid progenitor | 1.77e-19 | 108 |
leukocyte | 1.32e-15 | 136 |
nongranular leukocyte | 5.36e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 1.07e-12 | 120 |
hematopoietic stem cell | 2.43e-10 | 168 |
hematopoietic cell | 1.69e-09 | 177 |
hematopoietic oligopotent progenitor cell | 5.46e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.46e-09 | 161 |
intermediate monocyte | 1.45e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.45e-08 | 9 |
mesenchymal cell | 3.47e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.06e-31 | 76 |
bone element | 1.01e-28 | 82 |
immune system | 1.43e-27 | 93 |
skeletal element | 5.10e-26 | 90 |
hemolymphoid system | 3.17e-25 | 108 |
hematopoietic system | 4.67e-25 | 98 |
blood island | 4.67e-25 | 98 |
skeletal system | 2.30e-23 | 100 |
lateral plate mesoderm | 5.00e-17 | 203 |
mesoderm | 3.17e-13 | 315 |
mesoderm-derived structure | 3.17e-13 | 315 |
presumptive mesoderm | 3.17e-13 | 315 |
musculoskeletal system | 1.31e-12 | 167 |