FFCP PHASE1:Hg19::chr6:10415276..10415341,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:10415276..10415341,- to FFCP PHASE1:Hg19::chr6:10415276..10415341,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7020 | |EntrezGene=7020 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11742 | |HGNC=11742 | ||
|TSSclassifier=strong | |||
|UniProt=C9JXZ2 | |UniProt=C9JXZ2 | ||
|association_with_transcript=-43bp_to_ENST00000498450_5end | |||
|cluster_id=chr6:10415276..10415341,- | |||
|coexpression_cluster_id=C2835 | |||
|description=CAGE_peak_2_at_TFAP2A_5end | |||
|id=chr6:10415276..10415341,- | |||
|ontology_enrichment_celltype=CL:0000066!5.93e-42!254;CL:0002077!9.56e-14!33;CL:0002321!1.29e-13!248;CL:0000220!2.06e-13!246;CL:0002076!4.36e-13!43;CL:0000076!3.86e-11!62;CL:0000075!4.57e-08!27;CL:0000077!6.51e-08!19;CL:0000221!7.23e-08!71;CL:0002159!7.39e-08!13;CL:0000223!9.20e-08!59;CL:0000710!1.51e-07!20;CL:0002251!2.70e-07!21;CL:0000148!8.66e-07!10;CL:0000541!8.66e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002077;1.51e-12;34!CL:0002076;1.85e-10;42!CL:0000077;4.97e-09;19!CL:0000075;3.83e-08;27!CL:0002159;5.26e-08;14!CL:0000710;7.09e-08;20!CL:0000148;1.39e-07;10!CL:0002251;1.98e-07;20!CL:0000150;4.92e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.75e-45,253;CL:0002077,2.64e-14,34;CL:0002076,6.83e-14,42;CL:0000076,2.13e-12,63;CL:0002321,2.95e-12,250;CL:0000077,4.61e-09,19;CL:0000223,7.72e-09,58;CL:0000075,3.57e-08,27;CL:0002159,5.29e-08,14;CL:0000710,6.89e-08,20;CL:0000148,1.35e-07,10;CL:0000541,1.35e-07,10;CL:0002251,1.98e-07,20;CL:0000221,2.51e-07,72;CL:0000150,5.00e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.59e-19!143;DOID:305!3.12e-15!106;DOID:14566!3.13e-09!239;DOID:162!5.78e-09!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,7.28e-22,143;DOID:305,1.28e-16,106;DOID:162,3.13e-12,235;DOID:14566,6.67e-12,239 | |||
|ontology_enrichment_uberon=UBERON:0003102!8.76e-13!95;UBERON:0001004!3.95e-12!72;UBERON:0004119!4.66e-12!169;UBERON:0000925!4.66e-12!169;UBERON:0006595!4.66e-12!169;UBERON:0000065!1.32e-08!53;UBERON:0002097!1.92e-08!40;UBERON:0001007!3.38e-08!155;UBERON:0001555!3.38e-08!155;UBERON:0007026!3.38e-08!155;UBERON:0005631!4.58e-08!14;UBERON:0000158!4.58e-08!14;UBERON:0000077!5.60e-08!130;UBERON:0008947!8.16e-08!38;UBERON:0003258!8.16e-08!38;UBERON:0000161!8.18e-08!35;UBERON:0000166!1.90e-07!21;UBERON:0000062!4.17e-07!511;UBERON:0003100!4.62e-07!41;UBERON:0000072!4.79e-07!46;UBERON:0001003!5.97e-07!14;UBERON:0007376!5.97e-07!14;UBERON:0007383!5.97e-07!14;UBERON:0001737!8.22e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;6.33e-08;41!UBERON:0000161;6.34e-08;19!UBERON:0000166;6.34e-08;19!UBERON:0000165;6.77e-08;28!UBERON:0001737;1.30e-07;9!UBERON:0001557;1.30e-07;9!UBERON:0001004;2.70e-07;65!UBERON:0001003;4.32e-07;15!UBERON:0007376;4.32e-07;15!UBERON:0000065;4.44e-07;44!UBERON:0000072;6.40e-07;37!UBERON:0005631;8.32e-07;10!UBERON:0000158;8.32e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.72e-15,99;UBERON:0001004,5.54e-13,74;UBERON:0004119,4.21e-10,160;UBERON:0000925,4.21e-10,160;UBERON:0006595,4.21e-10,160;UBERON:0002097,7.61e-10,41;UBERON:0005631,4.55e-09,14;UBERON:0000158,4.55e-09,14;UBERON:0000166,7.24e-09,22;UBERON:0000065,2.32e-08,54;UBERON:0000165,3.25e-08,29;UBERON:0000930,3.25e-08,29;UBERON:0008947,5.04e-08,38;UBERON:0003258,5.04e-08,38;UBERON:0001737,1.27e-07,9;UBERON:0002199,1.46e-07,46;UBERON:0002416,1.46e-07,46;UBERON:0000161,2.28e-07,36;UBERON:0000072,3.20e-07,47;UBERON:0001003,4.31e-07,15;UBERON:0007376,4.31e-07,15;UBERON:0007383,4.31e-07,15;UBERON:0003100,9.47e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,88.0318729684594,55.3910654279752,0.123766352960047,0,2.6893005858071,1.20538905604795,2.19093027116212,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0,0,1.54816123316076,34.9380065301992,43.6748582228463,54.7235935046846,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.383587685530591,0,0.50133791063589,0.724232594804119,0,0.973269740605272,0.189069634328136,0,0.087834785693126,0.72038491523742,120.946035713124,77.4939485419457,0,0,0,0,0,0,2.98143611050058,5.16140757063675,3.81854551768354,9.04492707078415,6.29249154314859,6.32771496462155,1.67195973229448,0,1.42306505074684,0.33472061276467,0,0,0.732186172644509,0.367663080345869,4.0507097394088,0,0,0,0,0,0,0,0,92.0158450020747,0,4.43206790826029,22.2447423766208,10.6129549677061,2.4826786753885,5.60677600142307,7.47242970107935,7.64669400093196,0.311211035399766,1.61652806483626,0.817309515567294,0,0,8.66989297785048,0,2.2818872861778,0,0,0,0,2.85815839756851,8.10706494257669,3.09977343527296,1.18800285728205,0,0,0,9.59515849538177,9.13365195065338,7.75779523355712,0,0,0,1.36118619792025,14.1717812194201,8.96941033037983,6.35795703478686,12.9039171316293,4.43125875725287,26.0216945446085,15.8199327881851,26.4978841618788,20.8515191044965,20.1947019395292,6.25939310767636,38.4717615228772,8.87523981291536,7.2541510723901,31.3687095774402,51.6006477946003,41.7301564503977,50.7644133838537,3.04934265323988,1.59035721985782,4.76395165765025,9.74413917144482,7.56962552626885,0,9.38697193978896,16.0810234548221,5.52539685409922,0,0.721879481669586,49.3339356166149,61.8705812586633,66.0370221880741,52.9411069115491,57.5201732403952,63.825796540885,24.9437920096304,34.9274207923116,43.0916815779957,0,0,0,0,0,0,0,0,0.368965315629341,0.857839051492628,99.1045077239889,68.5650694871479,35.7883141785406,44.4424536760942,10.1000574646201,0,0,0.695582429850461,1.6437217193015,0.144366447761074,0,0.761016608938393,3.95102198979638,15.4527509177077,0,0,0,27.1828118561653,52.2424418698453,51.3225852017439,46.4808732827783,49.4077695473735,39.1050332748515,0,0,0.207328115540772,0.144119953416961,0.37872730027914,99.2472087786602,140.189752179888,240.295766780596,68.4289784090821,89.1514361737815,79.2905672707942,170.352553847825,0.784917590417525,0.87192013766656,0,4.00742318849111,0,0,15.6903488785074,19.7614130131596,0,0,0,0,0,0,0,0,0,6.33022691825131,6.10073421020206,2.89921674427965,0,0,0,8.38686994220539,2.29723871668228,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,17.8854940916494,19.805617756485,28.5441371211422,27.6453739382803,0,0,2.0694614258501,1.32845119707087,0.184369168541703,19.9832313276591,0.195801157462741,0,0,0,0,16.0657612866517,31.6227335069944,35.0772740262429,0.248107807818777,0.306923946576125,0,0,0.511707249066704,0,0,0,0,0,0,0,0.483437798366489,41.7053458230832,44.2909556781661,0.68888668898764,0,0.524497659837696,34.7423701938707,24.875953884726,11.7652465376528,18.9980992049239,9.49964660035881,0,0,0.215915916102139,4.62681758070868,0,1.00337954770971,21.6644832088283,33.243040357149,11.1937377361089,0,0,0,0.328014645699706,0,41.4224866823844,0.0915694648183434,0,99.3479380733378,76.7071090323095,0,0.193341436584244,0,0,0,0,0,0,0.178064071293475,48.7590500314885,42.4740048876885,62.6578418348408,45.9256325084197,8.83206543664843,9.75918275174984,0,3.38836938193698,3.72614221221915,2.60979897622522,10.7488047080274,8.1581185442935,0.372158369359667,0,0,0,0,6.68226820644467,21.1936132853792,0,0,0,3.23491970517306,3.17020642346017,2.10629228119491,0,0.731140468893853,0,0.136499911407986,0.848432591722276,0,20.9518830547527,9.95158462861829,11.8381739018516,0,1.31178950409327,0,0.6196469961995,0.281695602532241,0.717056761020258,0.687743287091848,0.35667105148125,0,0,0,5.31262443272001,2.0996083214699,53.5957167881102,45.5805547364335,65.3345909167935,43.8710111619791,52.52165546589,52.2261574569639,54.9853390385478,25.2695740227655,0,0,0,0,0,0,0,0,7.90498126343301,0,22.2986596542739,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,2.81974010175699,15.345524313474,0.146508179271894,0,0,0,21.2482591416544,34.4479029765861,36.2449628477094,0,0.140669416410513,3.67318726575589,0,0,1.79323189425963,0.276283915531148,0.503865495708552,5.82931490262282,0,7.46495010388338,8.80709841243803,14.8587574980756,0,1.38100767891707,0,0,0.969332746095218,0.185536196323703,0,54.9502575889842,111.51149999515,7.24999575434793,7.96554137998498,1.01701460117107,57.2058189878406,5.51589397186343,3.2076507472158,4.5142498682656,0,0,0,1.87984741883082,0.886642856860642,0.658156191461918,112.424494351598,11.0144757980097,5.77126938778478,0,5.07240589653732,0,10.3215003325908,22.3300811812344,15.4799932849147,48.506164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| ||
|short_description=p2@TFAP2A | |||
}} | }} |
Latest revision as of 13:01, 19 September 2015
Short description: | p2@TFAP2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TFAP2A_5end |
Coexpression cluster: | C2835_Melanocyte_myxofibrosarcoma_placenta_cervical_Corneal_breast_salivary |
Association with transcript: | -43bp_to_ENST00000498450_5end |
EntrezGene: | TFAP2A |
HGNC: | 11742 |
UniProt: | C9JXZ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.75e-45 | 253 |
ecto-epithelial cell | 2.64e-14 | 34 |
endo-epithelial cell | 6.83e-14 | 42 |
squamous epithelial cell | 2.13e-12 | 63 |
embryonic cell | 2.95e-12 | 250 |
mesothelial cell | 4.61e-09 | 19 |
endodermal cell | 7.72e-09 | 58 |
columnar/cuboidal epithelial cell | 3.57e-08 | 27 |
general ecto-epithelial cell | 5.29e-08 | 14 |
neurecto-epithelial cell | 6.89e-08 | 20 |
melanocyte | 1.35e-07 | 10 |
melanoblast | 1.35e-07 | 10 |
epithelial cell of alimentary canal | 1.98e-07 | 20 |
ectodermal cell | 2.51e-07 | 72 |
glandular epithelial cell | 5.00e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.72e-15 | 99 |
respiratory system | 5.54e-13 | 74 |
endoderm-derived structure | 4.21e-10 | 160 |
endoderm | 4.21e-10 | 160 |
presumptive endoderm | 4.21e-10 | 160 |
skin of body | 7.61e-10 | 41 |
extraembryonic membrane | 4.55e-09 | 14 |
membranous layer | 4.55e-09 | 14 |
oral opening | 7.24e-09 | 22 |
respiratory tract | 2.32e-08 | 54 |
mouth | 3.25e-08 | 29 |
stomodeum | 3.25e-08 | 29 |
respiratory primordium | 5.04e-08 | 38 |
endoderm of foregut | 5.04e-08 | 38 |
larynx | 1.27e-07 | 9 |
integument | 1.46e-07 | 46 |
integumental system | 1.46e-07 | 46 |
orifice | 2.28e-07 | 36 |
segment of respiratory tract | 3.20e-07 | 47 |
skin epidermis | 4.31e-07 | 15 |
outer epithelium | 4.31e-07 | 15 |
enveloping layer of ectoderm | 4.31e-07 | 15 |
female organism | 9.47e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 7.28e-22 | 143 |
carcinoma | 1.28e-16 | 106 |
cancer | 3.13e-12 | 235 |
disease of cellular proliferation | 6.67e-12 | 239 |