FFCP PHASE1:Hg19::chr14:24605389..24605446,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:24605389..24605446,+
|short_description=p1@PSME1
|description=CAGE_peak_1_at_PSME1_5end
|association_with_transcript=0bp_to_ENST00000382708,ENST0000047071...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5720 | |EntrezGene=5720 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9568 | |HGNC=9568 | ||
|TSSclassifier=strong | |||
|UniProt=A6NJG9 | |UniProt=A6NJG9 | ||
|association_with_transcript=0bp_to_ENST00000382708,ENST00000470718,ENST00000561059,ENST00000561142,ENST00000561435_5end | |||
|cluster_id=chr14:24605389..24605446,+ | |||
|description=CAGE_peak_1_at_PSME1_5end | |||
|id=chr14:24605389..24605446,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.15e-33!172;CL:0000566!2.15e-33!172;CL:0000988!5.21e-33!182;CL:0000738!2.93e-32!140;CL:0002032!1.04e-31!165;CL:0000837!1.04e-31!165;CL:0002087!1.06e-30!119;CL:0002031!1.33e-28!124;CL:0002057!9.11e-24!42;CL:0000860!1.39e-22!45;CL:0000542!2.93e-16!53;CL:0000051!2.93e-16!53;CL:0000838!6.33e-16!52;CL:0000763!1.55e-15!112;CL:0000049!1.55e-15!112;CL:0002194!6.22e-14!63;CL:0000576!6.22e-14!63;CL:0000040!6.22e-14!63;CL:0000559!6.22e-14!63;CL:0000766!6.48e-14!76;CL:0002009!9.16e-14!65;CL:0000839!3.68e-13!70;CL:0000557!1.31e-11!71;CL:0002320!7.24e-10!365;CL:0000134!2.06e-09!358;CL:0000084!5.16e-09!25;CL:0000827!5.16e-09!25;CL:0000945!6.16e-08!24;CL:0000826!6.16e-08!24;CL:0000048!4.14e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.99e-18;33!CL:0002057;5.99e-18;33!CL:0000473;1.17e-12;39!CL:0000234;1.17e-12;39!CL:0000576;1.86e-12;48!CL:0002087;1.64e-10;104!CL:0000542;7.28e-10;53!CL:0000084;5.08e-09;25!CL:0000766;1.64e-08;69!CL:0000738;2.84e-08;136!CL:0000945;6.10e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.31e-34,168;CL:0000988,1.97e-33,177;CL:0000738,6.09e-33,136;CL:0002032,3.05e-32,161;CL:0000837,3.05e-32,161;CL:0002087,1.68e-31,115;CL:0002031,2.64e-29,120;CL:0000860,9.11e-24,42;CL:0002057,9.11e-24,42;CL:0000473,1.24e-20,48;CL:0000234,1.24e-20,48;CL:0000542,2.93e-16,53;CL:0000051,2.93e-16,53;CL:0000763,6.13e-16,108;CL:0000049,6.13e-16,108;CL:0000838,6.33e-16,52;CL:0002194,1.20e-14,59;CL:0000576,1.20e-14,59;CL:0000040,1.20e-14,59;CL:0000559,1.20e-14,59;CL:0000766,1.74e-14,72;CL:0002009,1.92e-14,61;CL:0000839,9.45e-14,66;CL:0000557,4.15e-12,67;CL:0002320,9.31e-10,361;CL:0000134,2.62e-09,354;CL:0000084,5.16e-09,25;CL:0000827,5.16e-09,25;CL:0000945,6.16e-08,24;CL:0000826,6.16e-08,24;CL:0000048,4.49e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;2.48e-17;42!CL:0000051;7.28e-10;53 | |||
|ontology_enrichment_disease=DOID:2531!7.63e-07!51;DOID:0060083!7.63e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.63e-07,51;DOID:0060083,7.63e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!9.98e-17!112;UBERON:0002390!2.20e-16!102;UBERON:0003061!2.20e-16!102;UBERON:0002405!5.20e-13!115;UBERON:0002371!4.83e-11!80;UBERON:0002384!3.98e-10!375;UBERON:0001474!3.78e-09!86;UBERON:0003081!1.25e-07!216;UBERON:0004765!1.45e-07!101;UBERON:0001434!1.45e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.63e-17,108;UBERON:0002390,7.24e-17,98;UBERON:0003061,7.24e-17,98;UBERON:0002405,4.74e-13,93;UBERON:0002371,1.88e-11,76;UBERON:0002384,5.17e-10,371;UBERON:0001474,1.91e-09,82;UBERON:0004765,2.15e-09,90;UBERON:0001434,3.77e-08,100;UBERON:0003081,2.43e-07,203 | |||
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22064312,258.234277177287,565.1622519306 | ||
|short_description=p1@PSME1 | |||
}} | }} |
Latest revision as of 13:22, 19 September 2015
Short description: | p1@PSME1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PSME1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000382708, ENST00000470718, ENST00000561059, ENST00000561142, ENST00000561435_5end |
EntrezGene: | PSME1 |
HGNC: | 9568 |
UniProt: | A6NJG9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.63e-17 | 108 |
hematopoietic system | 7.24e-17 | 98 |
blood island | 7.24e-17 | 98 |
immune system | 4.74e-13 | 93 |
bone marrow | 1.88e-11 | 76 |
connective tissue | 5.17e-10 | 371 |
bone element | 1.91e-09 | 82 |
skeletal element | 2.15e-09 | 90 |
skeletal system | 3.77e-08 | 100 |
lateral plate mesoderm | 2.43e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.63e-07 | 51 |
immune system cancer | 7.63e-07 | 51 |