FFCP PHASE1:Hg19::chr5:10442112..10442153,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83853 | |EntrezGene=83853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24060 | |HGNC=24060 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-39bp_to_ENST00000512022_5end | |association_with_transcript=-39bp_to_ENST00000512022_5end | ||
|cluster_id=chr5:10442112..10442153,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_3_at_ROPN1L_5end | |description=CAGE_peak_3_at_ROPN1L_5end | ||
|id=chr5:10442112..10442153,+ | |id=chr5:10442112..10442153,+ | ||
|ontology_enrichment_celltype=CL:0002127!4.44e-11!1;CL:0000914!4.44e-11!1;CL:0000911!4.44e-11!1;CL:0000814!4.44e-11!1;CL:0002042!4.44e-11!1;CL:0002039!4.44e-11!1;CL:0002040!4.44e-11!1;CL:0002041!4.44e-11!1 | |ontology_enrichment_celltype=CL:0002127!4.44e-11!1;CL:0000914!4.44e-11!1;CL:0000911!4.44e-11!1;CL:0000814!4.44e-11!1;CL:0002042!4.44e-11!1;CL:0002039!4.44e-11!1;CL:0002040!4.44e-11!1;CL:0002041!4.44e-11!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!1.31e-11!1;UBERON:0001282!3.63e-11!1;UBERON:0009842!3.63e-11!1;UBERON:0003704!3.63e-11!1;UBERON:0001171!3.63e-11!1;UBERON:0001172!3.63e-11!1;UBERON:0007190!6.00e-11!1;UBERON:0003135!4.92e-09!11;UBERON:0003101!1.21e-07!22;UBERON:0000079!1.21e-07!22 | |ontology_enrichment_uberon=UBERON:0001301!1.31e-11!1;UBERON:0001282!3.63e-11!1;UBERON:0009842!3.63e-11!1;UBERON:0003704!3.63e-11!1;UBERON:0001171!3.63e-11!1;UBERON:0001172!3.63e-11!1;UBERON:0007190!6.00e-11!1;UBERON:0003135!4.92e-09!11;UBERON:0003101!1.21e-07!22;UBERON:0000079!1.21e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
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|short_description=p3@ROPN1L | |short_description=p3@ROPN1L | ||
}} | }} |
Latest revision as of 14:20, 19 September 2015
Short description: | p3@ROPN1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ROPN1L_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -39bp_to_ENST00000512022_5end |
EntrezGene: | ROPN1L |
HGNC: | 24060 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |