FFCP PHASE1:Hg19::chr5:10442281..10442289,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83853 | |EntrezGene=83853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24060 | |HGNC=24060 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=88bp_to_ENST00000512022_5end | |association_with_transcript=88bp_to_ENST00000512022_5end | ||
|cluster_id=chr5:10442281..10442289,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_5_at_ROPN1L_5end | |description=CAGE_peak_5_at_ROPN1L_5end | ||
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|ontology_enrichment_celltype=CL:0000771!1.57e-10!2;CL:0000094!4.03e-10!8;CL:0000081!1.33e-07!11;CL:0000775!2.19e-07!3;CL:0002622!2.79e-07!3 | |ontology_enrichment_celltype=CL:0000771!1.57e-10!2;CL:0000094!4.03e-10!8;CL:0000081!1.33e-07!11;CL:0000775!2.19e-07!3;CL:0002622!2.79e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000771;5.04e-34;2!CL:0000094;1.35e-09;8!CL:0000081;2.47e-07;11 | |ontology_enrichment_celltype_v019=CL:0000771;5.04e-34;2!CL:0000094;1.35e-09;8!CL:0000081;2.47e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000771,5.04e-34,2;CL:0000094,1.35e-09,8;CL:0000081,2.47e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.38e-27;10!UBERON:0005564;2.38e-27;10 | |ontology_enrichment_development_v019=UBERON:0009117;2.38e-27;10!UBERON:0005564;2.38e-27;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!2.25e-19!1;UBERON:0002336!5.62e-19!1;UBERON:0001018!5.62e-19!1;UBERON:0002473!5.62e-19!1;UBERON:0005340!5.62e-19!1;UBERON:0002316!5.62e-19!1;UBERON:0003544!5.62e-19!1;UBERON:0001020!5.62e-19!1;UBERON:0005970!5.62e-19!1;UBERON:0002437!5.62e-19!1;UBERON:0003135!1.38e-15!11;UBERON:0003101!1.44e-13!22;UBERON:0000079!1.44e-13!22;UBERON:0005162!3.58e-10!2;UBERON:0000122!3.58e-10!2;UBERON:0000473!3.68e-10!8;UBERON:0006947!2.47e-07!3;UBERON:0004054!2.47e-07!3;UBERON:0002110!2.63e-07!3;UBERON:0006242!2.63e-07!3 | |ontology_enrichment_uberon=UBERON:0001301!2.25e-19!1;UBERON:0002336!5.62e-19!1;UBERON:0001018!5.62e-19!1;UBERON:0002473!5.62e-19!1;UBERON:0005340!5.62e-19!1;UBERON:0002316!5.62e-19!1;UBERON:0003544!5.62e-19!1;UBERON:0001020!5.62e-19!1;UBERON:0005970!5.62e-19!1;UBERON:0002437!5.62e-19!1;UBERON:0003135!1.38e-15!11;UBERON:0003101!1.44e-13!22;UBERON:0000079!1.44e-13!22;UBERON:0005162!3.58e-10!2;UBERON:0000122!3.58e-10!2;UBERON:0000473!3.68e-10!8;UBERON:0006947!2.47e-07!3;UBERON:0004054!2.47e-07!3;UBERON:0002110!2.63e-07!3;UBERON:0006242!2.63e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.68e-34;8!UBERON:0003135;5.49e-25;11!UBERON:0000991;1.09e-13;21!UBERON:0003101;4.01e-13;22!UBERON:0000079;4.01e-13;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;7.68e-34;8!UBERON:0003135;5.49e-25;11!UBERON:0000991;1.09e-13;21!UBERON:0003101;4.01e-13;22!UBERON:0000079;4.01e-13;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.68e-34,8;UBERON:0003135,5.49e-25,11;UBERON:0000991,1.09e-13,21;UBERON:0009196,1.09e-13,21;UBERON:0009117,1.09e-13,21;UBERON:0005564,1.09e-13,21;UBERON:0004176,4.01e-13,22;UBERON:0003101,4.01e-13,22;UBERON:0000079,4.01e-13,22;UBERON:0002323,7.52e-07,46 | |||
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|short_description=p5@ROPN1L | |short_description=p5@ROPN1L | ||
}} | }} |
Latest revision as of 14:20, 19 September 2015
Short description: | p5@ROPN1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ROPN1L_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 88bp_to_ENST00000512022_5end |
EntrezGene: | ROPN1L |
HGNC: | 24060 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 5.04e-34 | 2 |
granulocyte | 1.35e-09 | 8 |
blood cell | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
testis | 7.68e-34 | 8 |
male reproductive organ | 5.49e-25 | 11 |
gonad | 1.09e-13 | 21 |
indifferent external genitalia | 1.09e-13 | 21 |
indifferent gonad | 1.09e-13 | 21 |
gonad primordium | 1.09e-13 | 21 |
external genitalia | 4.01e-13 | 22 |
male organism | 4.01e-13 | 22 |
male reproductive system | 4.01e-13 | 22 |
body cavity | 7.52e-07 | 46 |