FFCP PHASE1:Hg19::chr7:76911794..76911816,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57639 | |EntrezGene=57639 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29296 | |HGNC=29296 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENST00000474733_5end | |association_with_transcript=-11bp_to_ENST00000474733_5end | ||
|cluster_id=chr7:76911794..76911816,+ | |||
|coexpression_cluster_id=C2902 | |||
|description=CAGE_peak_2_at_CCDC146_5end | |description=CAGE_peak_2_at_CCDC146_5end | ||
|id=chr7:76911794..76911816,+ | |id=chr7:76911794..76911816,+ | ||
|ontology_enrichment_celltype=CL:0000136!3.96e-11!15;CL:0002579!4.34e-08!3;CL:0002615!5.51e-08!3;CL:0002605!6.51e-07!3 | |ontology_enrichment_celltype=CL:0000136!3.96e-11!15;CL:0002579!4.34e-08!3;CL:0002615!5.51e-08!3;CL:0002605!6.51e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002579;2.59e-10;3!CL:0002581;2.25e-08;1!CL:0000319;2.25e-08;1!CL:0000222;4.72e-08;1!CL:0002616;4.72e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,2.98e-10,3;CL:0002581,1.88e-08,1;CL:0000319,2.33e-08,1;CL:0002616,3.33e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.25e-08;1!UBERON:0001045;2.25e-08;1!UBERON:0006242;2.25e-08;1!UBERON:0005062;6.25e-08;4!UBERON:0007284;6.25e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;2.25e-08;1!DOID:3571;4.72e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,2.33e-08,1;DOID:3571,4.41e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!2.13e-14!6;UBERON:0002358!2.13e-14!6;UBERON:0003684!2.13e-14!6;UBERON:0001178!2.13e-14!6;UBERON:0004457!6.90e-09!12;UBERON:0000042!6.90e-09!12;UBERON:0002417!2.73e-08!61;UBERON:0000916!2.73e-08!61;UBERON:0007023!1.41e-07!115 | |ontology_enrichment_uberon=UBERON:0003688!2.13e-14!6;UBERON:0002358!2.13e-14!6;UBERON:0003684!2.13e-14!6;UBERON:0001178!2.13e-14!6;UBERON:0004457!6.90e-09!12;UBERON:0000042!6.90e-09!12;UBERON:0002417!2.73e-08!61;UBERON:0000916!2.73e-08!61;UBERON:0007023!1.41e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000341;6.57e-15;2!UBERON:0005406;1.00e-14;2!UBERON:0003688;6.03e-11;6!UBERON:0002358;6.03e-11;6!UBERON:0003684;6.03e-11;6!UBERON:0001178;6.03e-11;6!UBERON:0003978;2.71e-10;3!UBERON:0000946;2.71e-10;3!UBERON:0001301;1.05e-08;1!UBERON:0002146;1.22e-08;1!UBERON:0005623;1.22e-08;1!UBERON:0007029;1.46e-08;1!UBERON:0001154;2.25e-08;1!UBERON:0001153;2.25e-08;1!UBERON:0009854;2.25e-08;1!UBERON:0002135;4.72e-08;1!UBERON:0004457;1.87e-07;9!UBERON:0000042;1.87e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,5.92e-15,2;UBERON:0000341,7.31e-15,2;UBERON:0003688,8.20e-11,6;UBERON:0002358,8.20e-11,6;UBERON:0003684,8.20e-11,6;UBERON:0001178,8.20e-11,6;UBERON:0003978,3.27e-10,3;UBERON:0009751,3.27e-10,3;UBERON:0000946,3.27e-10,3;UBERON:0002523,3.27e-10,3;UBERON:0005983,3.27e-10,3;UBERON:0002165,3.27e-10,3;UBERON:0002062,3.27e-10,3;UBERON:0007280,3.27e-10,3;UBERON:0001301,1.05e-08,1;UBERON:0002146,1.22e-08,1;UBERON:0005623,1.22e-08,1;UBERON:0007029,1.41e-08,1;UBERON:0001154,2.89e-08,1;UBERON:0001153,2.89e-08,1;UBERON:0001045,2.89e-08,1;UBERON:0002135,6.24e-08,1;UBERON:0002417,7.08e-08,60;UBERON:0000916,7.08e-08,60 | |||
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|phase1_expression=0.181678379270557,0,0.845726424575827,1.0007329835313,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57275793023962,0,0,0,0.710783897485092,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,1.15325234330131,5.62877973973374,0.160853921143607,2.96836132889982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38721580026819,2.21027132424918,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,19.5879369790977,0,0,0,0,1.83309043480088,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0.569219092059585,0,0,0,0,6.81434006143918,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,2.56143593687223,0,0,0,0,0,0,0,0,0,0.305994652908965,0,0,0,0,0,0,1.11712960508902,4.35404805622199,0,0,0,0,0.470284307407084,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18208560948797,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0.336749488765919,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0.156986185701028,0,0,0,0.215927591218621,0,0,0,1.62737995515375,0,0,0,0,0,0,0,0,0,2.97838929107265,0,0,0,0,0,0,0.205325613712494,0,3.39997695141398,0,0,0,0,0,0,0.231522474323834,0.655678681511872,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,3.65168194123259,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.803892390468535,0,0,1.27940389140589,3.09483760902862,0,0.124149428591716,0.672791175483681,0.318235791390825,2.82964064541507,0.217716747896961,1.02669990325584,0.134704106029175,0.143444410785353,0.99798106963804,0,0,0,0,2.34640942403454,0.366724332548599,0.813792356631477,0,0,0 | ||
|short_description=p2@CCDC146 | |short_description=p2@CCDC146 | ||
}} | }} |
Latest revision as of 14:30, 19 September 2015
Short description: | p2@CCDC146 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCDC146_5end |
Coexpression cluster: | C2902_clear_Preadipocyte_epididymis_aorta_heart_skin_thyroid |
Association with transcript: | -11bp_to_ENST00000474733_5end |
EntrezGene: | CCDC146 |
HGNC: | 29296 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 2.98e-10 | 3 |
perirenal preadipocyte | 1.88e-08 | 1 |
mucus secreting cell | 2.33e-08 | 1 |
perirenal adipocyte cell | 3.33e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 5.92e-15 | 2 |
throat | 7.31e-15 | 2 |
omentum | 8.20e-11 | 6 |
peritoneum | 8.20e-11 | 6 |
abdominal cavity | 8.20e-11 | 6 |
visceral peritoneum | 8.20e-11 | 6 |
valve | 3.27e-10 | 3 |
cardiac mesenchyme | 3.27e-10 | 3 |
cardial valve | 3.27e-10 | 3 |
tunica intima | 3.27e-10 | 3 |
heart layer | 3.27e-10 | 3 |
endocardium | 3.27e-10 | 3 |
endocardial cushion | 3.27e-10 | 3 |
presumptive endocardium | 3.27e-10 | 3 |
epididymis | 1.05e-08 | 1 |
pulmonary valve | 1.22e-08 | 1 |
semi-lunar valve | 1.22e-08 | 1 |
surface | 1.41e-08 | 1 |
vermiform appendix | 2.89e-08 | 1 |
caecum | 2.89e-08 | 1 |
midgut | 2.89e-08 | 1 |
mitral valve | 6.24e-08 | 1 |
abdominal segment of trunk | 7.08e-08 | 60 |
abdomen | 7.08e-08 | 60 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.33e-08 | 1 |
liver cancer | 4.41e-08 | 1 |