FFCP PHASE1:Hg19::chr2:204399976..204400011,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65059 | |EntrezGene=65059 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14436 | |HGNC=14436 | ||
|TSSclassifier=strong | |||
|UniProt=C9J164 | |UniProt=C9J164 | ||
|association_with_transcript=0bp_to_ENST00000457812,ENST00000465669_5end | |association_with_transcript=0bp_to_ENST00000457812,ENST00000465669_5end | ||
|cluster_id=chr2:204399976..204400011,- | |||
|description=CAGE_peak_2_at_RAPH1_5end | |description=CAGE_peak_2_at_RAPH1_5end | ||
|id=chr2:204399976..204400011,- | |id=chr2:204399976..204400011,- | ||
|ontology_enrichment_celltype=CL:0000222!4.08e-12!119;CL:0002321!6.22e-11!248;CL:0000055!7.42e-11!180;CL:0000220!8.92e-11!246;CL:0002139!7.79e-09!24;CL:0000115!1.06e-08!35;CL:0000071!1.75e-08!18;CL:0002546!1.75e-08!18;CL:0000213!3.35e-08!57;CL:0000215!3.35e-08!57;CL:0002078!2.71e-07!44 | |ontology_enrichment_celltype=CL:0000222!4.08e-12!119;CL:0002321!6.22e-11!248;CL:0000055!7.42e-11!180;CL:0000220!8.92e-11!246;CL:0002139!7.79e-09!24;CL:0000115!1.06e-08!35;CL:0000071!1.75e-08!18;CL:0002546!1.75e-08!18;CL:0000213!3.35e-08!57;CL:0000215!3.35e-08!57;CL:0002078!2.71e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0002139;8.57e-09;24!CL:0000071;1.78e-08;18!CL:0000115;2.43e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.58e-12,121;CL:0002321,2.71e-11,250;CL:0002139,7.56e-09,24;CL:0000115,9.23e-09,36;CL:0000071,1.70e-08,18;CL:0002546,1.70e-08,18;CL:0000213,3.13e-08,58;CL:0000215,3.13e-08,58;CL:0002078,2.25e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002546;1.78e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.75e-21!659;UBERON:0000480!5.42e-20!626;UBERON:0000467!6.64e-20!625;UBERON:0002049!2.20e-14!79;UBERON:0007798!2.20e-14!79;UBERON:0000922!7.36e-14!612;UBERON:0002050!2.50e-13!605;UBERON:0005423!2.50e-13!605;UBERON:0000923!2.93e-13!604;UBERON:0005291!2.93e-13!604;UBERON:0006598!2.93e-13!604;UBERON:0002532!2.93e-13!604;UBERON:0004872!3.67e-13!84;UBERON:0000477!3.73e-13!286;UBERON:0003914!3.99e-13!118;UBERON:0000055!1.13e-12!69;UBERON:0000926!1.81e-11!448;UBERON:0004120!1.81e-11!448;UBERON:0006603!1.81e-11!448;UBERON:0001981!4.92e-11!60;UBERON:0007500!4.92e-11!60;UBERON:0004537!4.92e-11!60;UBERON:0006965!4.92e-11!60;UBERON:0004111!5.16e-11!241;UBERON:0000062!5.34e-11!511;UBERON:0000490!1.46e-10!138;UBERON:0000025!2.59e-10!194;UBERON:0000119!1.03e-09!312;UBERON:0000483!1.19e-09!309;UBERON:0004535!2.04e-09!110;UBERON:0000481!2.89e-09!347;UBERON:0001009!2.96e-09!113;UBERON:0001986!1.75e-08!18;UBERON:0004638!1.75e-08!18;UBERON:0004852!1.75e-08!18;UBERON:0000487!6.35e-08!22;UBERON:0003104!1.65e-07!238;UBERON:0009142!1.65e-07!238;UBERON:0001637!5.36e-07!42;UBERON:0003509!5.36e-07!42;UBERON:0004572!5.36e-07!42;UBERON:0006914!5.48e-07!25;UBERON:0002100!6.25e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.78e-08;18!UBERON:0001986;1.78e-08;18!UBERON:0004852;1.78e-08;18!UBERON:0000487;6.91e-08;22!UBERON:0006914;5.37e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,3.66e-14,78;UBERON:0007798,3.66e-14,78;UBERON:0000922,1.05e-13,592;UBERON:0000923,1.61e-13,560;UBERON:0010316,1.61e-13,560;UBERON:0005291,1.61e-13,560;UBERON:0006598,1.61e-13,560;UBERON:0010317,1.61e-13,560;UBERON:0002532,1.61e-13,560;UBERON:0002050,2.04e-13,564;UBERON:0004872,5.67e-13,83;UBERON:0003914,9.27e-13,117;UBERON:0000055,1.88e-12,68;UBERON:0005423,2.02e-12,581;UBERON:0000490,1.95e-11,148;UBERON:0007500,8.15e-11,59;UBERON:0001981,8.15e-11,59;UBERON:0004537,8.15e-11,59;UBERON:0006965,8.15e-11,59;UBERON:0004111,2.73e-10,240;UBERON:0000025,8.63e-10,192;UBERON:0000119,9.43e-10,309;UBERON:0000483,1.09e-09,306;UBERON:0004535,3.34e-09,109;UBERON:0001009,4.80e-09,112;UBERON:0004638,1.70e-08,18;UBERON:0001986,1.70e-08,18;UBERON:0004852,1.70e-08,18;UBERON:0000487,6.19e-08,22;UBERON:0002100,2.75e-07,199;UBERON:0001637,5.24e-07,42;UBERON:0003509,5.24e-07,42;UBERON:0004572,5.24e-07,42;UBERON:0006914,5.35e-07,25;UBERON:0003081,6.36e-07,203 | |||
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| ||
|short_description=p2@RAPH1 | |short_description=p2@RAPH1 | ||
}} | }} |
Latest revision as of 15:54, 19 September 2015
Short description: | p2@RAPH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAPH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000457812, ENST00000465669_5end |
EntrezGene: | RAPH1 |
HGNC: | 14436 |
UniProt: | C9J164 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.58e-12 | 121 |
embryonic cell | 2.71e-11 | 250 |
endothelial cell of vascular tree | 7.56e-09 | 24 |
endothelial cell | 9.23e-09 | 36 |
blood vessel endothelial cell | 1.70e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.70e-08 | 18 |
lining cell | 3.13e-08 | 58 |
barrier cell | 3.13e-08 | 58 |
meso-epithelial cell | 2.25e-07 | 45 |