FFCP PHASE1:Hg19::chr12:58159332..58159353,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1594 | |EntrezGene=1594 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2606 | |HGNC=2606 | ||
|TSSclassifier=strong | |||
|UniProt=F8VWR7 | |UniProt=F8VWR7 | ||
|association_with_transcript=114bp_to_ENST00000546567,ENST00000547451,uc001sqb.1,uc001sqc.1_5end | |association_with_transcript=114bp_to_ENST00000546567,ENST00000547451,uc001sqb.1,uc001sqc.1_5end | ||
|cluster_id=chr12:58159332..58159353,- | |||
|coexpression_cluster_id=C3310 | |||
|description=CAGE_peak_3_at_CYP27B1_5end | |description=CAGE_peak_3_at_CYP27B1_5end | ||
|id=chr12:58159332..58159353,- | |id=chr12:58159332..58159353,- | ||
|ontology_enrichment_celltype=CL:0002076!1.07e-16!43;CL:0000066!1.65e-16!254;CL:0002368!2.94e-16!13;CL:0002159!1.31e-15!13;CL:0000223!4.82e-14!59;CL:0002327!1.07e-09!4;CL:0002202!6.91e-09!9;CL:0002632!6.91e-09!9;CL:0002077!3.12e-08!33;CL:0000068!7.43e-08!3;CL:0000069!7.43e-08!3;CL:0000307!7.43e-08!3;CL:0000377!7.43e-08!3;CL:0002328!1.15e-07!3;CL:0000362!3.70e-07!8;CL:0002621!3.81e-07!3;CL:0002166!5.08e-07!3;CL:0002231!7.62e-07!3 | |ontology_enrichment_celltype=CL:0002076!1.07e-16!43;CL:0000066!1.65e-16!254;CL:0002368!2.94e-16!13;CL:0002159!1.31e-15!13;CL:0000223!4.82e-14!59;CL:0002327!1.07e-09!4;CL:0002202!6.91e-09!9;CL:0002632!6.91e-09!9;CL:0002077!3.12e-08!33;CL:0000068!7.43e-08!3;CL:0000069!7.43e-08!3;CL:0000307!7.43e-08!3;CL:0000377!7.43e-08!3;CL:0002328!1.15e-07!3;CL:0000362!3.70e-07!8;CL:0002621!3.81e-07!3;CL:0002166!5.08e-07!3;CL:0002231!7.62e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002368;6.45e-49;13!CL:0000307;4.03e-25;3!CL:0002202;1.44e-22;9!CL:0002632;1.44e-22;9!CL:0002076;1.59e-20;42!CL:0002327;6.76e-19;4!CL:0000317;5.96e-17;2!CL:1000448;5.96e-17;2!CL:0002308;5.96e-17;2!CL:0002140;5.96e-17;2!CL:0000362;8.14e-15;9!CL:0002159;1.44e-14;14!CL:0000240;6.38e-13;6!CL:0000311;6.38e-13;6!CL:0000079;6.38e-13;6!CL:0000237;6.38e-13;6!CL:0002328;7.11e-12;3!CL:0002336;3.82e-09;1!CL:0002261;3.82e-09;1!CL:0002170;3.82e-09;1!CL:0000244;9.61e-09;4!CL:0000731;9.61e-09;4!CL:0002077;9.01e-08;34!CL:0000312;1.12e-07;5!CL:0000622;2.59e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,6.11e-49,13;CL:0002076,2.51e-25,42;CL:0000068,4.21e-25,3;CL:0000069,4.21e-25,3;CL:0000307,4.21e-25,3;CL:0000377,4.21e-25,3;CL:0002202,1.61e-22,9;CL:0002632,1.61e-22,9;CL:0002327,6.97e-19,4;CL:0000223,8.88e-18,58;CL:0000317,6.47e-17,2;CL:1000448,6.47e-17,2;CL:0002308,6.47e-17,2;CL:0002140,6.47e-17,2;CL:0000362,8.44e-15,9;CL:0000066,1.51e-14,253;CL:0002159,1.55e-14,14;CL:0000240,7.80e-13,6;CL:0000311,7.80e-13,6;CL:0000079,7.80e-13,6;CL:0000237,7.80e-13,6;CL:0000036,7.80e-13,6;CL:0000357,7.80e-13,6;CL:0000114,7.80e-13,6;CL:0002328,7.92e-12,3;CL:0002336,5.72e-09,1;CL:0002261,5.72e-09,1;CL:0002170,5.72e-09,1;CL:0000244,9.25e-09,4;CL:0000731,9.25e-09,4;CL:0002077,3.62e-08,34;CL:0000312,1.12e-07,5;CL:0000622,2.68e-07,5;CL:0002321,4.11e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000377;4.03e-25;3!CL:0000357;6.38e-13;6!CL:0000114;6.38e-13;6!CL:0000223;4.99e-12;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.88e-10!169;UBERON:0000925!4.88e-10!169;UBERON:0006595!4.88e-10!169;UBERON:0001911!1.07e-09!4;UBERON:0005333!1.07e-09!4;UBERON:0008425!1.07e-09!4;UBERON:0005311!1.07e-09!4;UBERON:0005157!1.13e-09!51;UBERON:0005911!3.24e-09!82;UBERON:0005153!6.30e-09!37;UBERON:0001004!6.92e-09!72;UBERON:0005085!4.06e-08!29;UBERON:0000065!4.79e-08!53;UBERON:0004815!1.15e-07!3;UBERON:0002031!1.15e-07!3;UBERON:0005178!2.72e-07!34;UBERON:0002224!2.72e-07!34;UBERON:0001949!3.81e-07!3;UBERON:0007196!4.92e-07!14;UBERON:0001558!4.92e-07!14;UBERON:0005181!5.36e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;6.76e-19;4!UBERON:0002419;5.96e-17;2!UBERON:0007771;5.96e-17;2!UBERON:0003297;5.96e-17;2!UBERON:0001821;5.96e-17;2!UBERON:0003487;5.96e-17;2!UBERON:0001820;5.96e-17;2!UBERON:0007196;1.70e-13;15!UBERON:0001558;1.70e-13;15!UBERON:0004815;7.11e-12;3!UBERON:0002031;7.11e-12;3!UBERON:0003126;4.25e-11;7!UBERON:0001005;4.25e-11;7!UBERON:0000065;1.17e-10;44!UBERON:0001003;5.94e-09;15!UBERON:0007376;5.94e-09;15!UBERON:0002185;1.82e-07;5!UBERON:0000365;3.67e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,6.97e-19,4;UBERON:0005333,6.97e-19,4;UBERON:0008425,6.97e-19,4;UBERON:0005311,6.97e-19,4;UBERON:0002419,6.47e-17,2;UBERON:0007771,6.47e-17,2;UBERON:0003297,6.47e-17,2;UBERON:0001821,6.47e-17,2;UBERON:0003487,6.47e-17,2;UBERON:0001820,6.47e-17,2;UBERON:0005089,6.47e-17,2;UBERON:0005088,6.47e-17,2;UBERON:0007196,1.82e-13,15;UBERON:0001558,1.82e-13,15;UBERON:0004815,7.92e-12,3;UBERON:0002031,7.92e-12,3;UBERON:0003126,4.32e-11,7;UBERON:0001005,4.32e-11,7;UBERON:0000065,8.45e-11,54;UBERON:0000076,1.03e-09,8;UBERON:0001004,2.76e-09,74;UBERON:0001003,6.07e-09,15;UBERON:0007376,6.07e-09,15;UBERON:0007383,6.07e-09,15;UBERON:0005085,6.23e-09,31;UBERON:0005157,1.10e-07,47;UBERON:0002185,1.95e-07,5;UBERON:0005153,2.09e-07,37;UBERON:0004119,3.38e-07,160;UBERON:0000925,3.38e-07,160;UBERON:0006595,3.38e-07,160;UBERON:0000365,3.56e-07,5 | |||
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|short_description=p3@CYP27B1 | |short_description=p3@CYP27B1 | ||
}} | }} |
Latest revision as of 16:39, 19 September 2015
Short description: | p3@CYP27B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CYP27B1_5end |
Coexpression cluster: | C3310_Keratinocyte_Bronchial_Corneal_Small_Tracheal_Mammary_Prostate |
Association with transcript: | 114bp_to_ENST00000546567, ENST00000547451, uc001sqb.1, uc001sqc.1_5end |
EntrezGene: | CYP27B1 |
HGNC: | 2606 |
UniProt: | F8VWR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland | 6.97e-19 | 4 |
mammary bud | 6.97e-19 | 4 |
mammary ridge | 6.97e-19 | 4 |
mammary placode | 6.97e-19 | 4 |
skin gland | 6.47e-17 | 2 |
epidermis gland | 6.47e-17 | 2 |
gland of integumental system | 6.47e-17 | 2 |
sebaceous gland | 6.47e-17 | 2 |
skin sebaceous gland | 6.47e-17 | 2 |
sweat gland | 6.47e-17 | 2 |
sweat gland placode | 6.47e-17 | 2 |
sebaceous gland placode | 6.47e-17 | 2 |
tracheobronchial tree | 1.82e-13 | 15 |
lower respiratory tract | 1.82e-13 | 15 |
lower respiratory tract epithelium | 7.92e-12 | 3 |
epithelium of bronchus | 7.92e-12 | 3 |
trachea | 4.32e-11 | 7 |
respiratory airway | 4.32e-11 | 7 |
respiratory tract | 8.45e-11 | 54 |
external ectoderm | 1.03e-09 | 8 |
respiratory system | 2.76e-09 | 74 |
skin epidermis | 6.07e-09 | 15 |
outer epithelium | 6.07e-09 | 15 |
enveloping layer of ectoderm | 6.07e-09 | 15 |
ectodermal placode | 6.23e-09 | 31 |
epithelial fold | 1.10e-07 | 47 |
bronchus | 1.95e-07 | 5 |
epithelial bud | 2.09e-07 | 37 |
endoderm-derived structure | 3.38e-07 | 160 |
endoderm | 3.38e-07 | 160 |
presumptive endoderm | 3.38e-07 | 160 |
urothelium | 3.56e-07 | 5 |