FFCP PHASE1:Hg19::chr7:81399329..81399345,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:81399329..81399345,-
|short_description=p3@HGF
|description=CAGE_peak_3_at_HGF_5end
|association_with_transcript=0bp_to_ENST00000453411_5end
|EntrezGene=3...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3082 | |EntrezGene=3082 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4893 | |HGNC=4893 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000453411_5end | |||
|cluster_id=chr7:81399329..81399345,- | |||
|coexpression_cluster_id=C154 | |||
|description=CAGE_peak_3_at_HGF_5end | |||
|id=chr7:81399329..81399345,- | |||
|ontology_enrichment_celltype=CL:0000055!1.45e-23!180;CL:0000680!4.52e-21!57;CL:0000056!4.52e-21!57;CL:0000355!4.52e-21!57;CL:0000187!4.70e-21!54;CL:0000393!1.00e-19!60;CL:0000211!1.00e-19!60;CL:0000183!5.82e-19!59;CL:0000192!3.99e-15!42;CL:0000514!3.99e-15!42;CL:0000057!1.00e-14!75;CL:0000359!9.09e-10!32;CL:0000048!3.37e-08!430;CL:0002494!3.63e-08!16;CL:0000723!1.61e-07!436;CL:0000034!4.03e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000187;7.44e-14;55!CL:0000393;5.24e-13;61!CL:0000211;5.24e-13;61!CL:0000192;2.65e-12;43!CL:0002494;3.49e-10;16!CL:0000359;2.60e-09;32!CL:0000188;2.93e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,4.44e-25,58;CL:0000056,4.44e-25,58;CL:0000355,4.44e-25,58;CL:0000187,1.17e-24,55;CL:0000393,4.56e-23,61;CL:0000211,4.56e-23,61;CL:0000192,1.24e-16,43;CL:0000514,1.24e-16,43;CL:0000057,2.82e-14,76;CL:0002494,3.85e-10,16;CL:0000359,1.52e-09,32;CL:0000048,5.52e-09,427;CL:0000723,2.19e-08,433;CL:0000222,8.02e-08,121;CL:0000034,1.25e-07,441;CL:0000188,2.53e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000355;5.65e-14;58!CL:0000514;2.65e-12;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.82e-26!83;UBERON:0002329!6.82e-26!83;UBERON:0003077!6.82e-26!83;UBERON:0003059!6.82e-26!83;UBERON:0007282!6.82e-26!83;UBERON:0009618!6.82e-26!83;UBERON:0007285!6.82e-26!83;UBERON:0004290!2.28e-23!70;UBERON:0002385!1.40e-22!63;UBERON:0001015!1.40e-22!63;UBERON:0000383!1.40e-22!63;UBERON:0001134!6.33e-22!61;UBERON:0002036!6.33e-22!61;UBERON:0003082!6.33e-22!61;UBERON:0005256!1.07e-17!143;UBERON:0000486!2.34e-17!82;UBERON:0000481!1.24e-13!347;UBERON:0004872!1.22e-11!84;UBERON:0000468!1.48e-11!659;UBERON:0000475!2.17e-11!365;UBERON:0000477!3.42e-11!286;UBERON:0000948!5.28e-11!24;UBERON:0005498!5.28e-11!24;UBERON:0004140!5.28e-11!24;UBERON:0009881!5.28e-11!24;UBERON:0004141!5.28e-11!24;UBERON:0003084!5.28e-11!24;UBERON:0007005!5.28e-11!24;UBERON:0004139!5.28e-11!24;UBERON:0004291!5.28e-11!24;UBERON:0000119!6.94e-11!312;UBERON:0000483!1.03e-10!309;UBERON:0002204!4.84e-10!167;UBERON:0007023!5.24e-10!115;UBERON:0000467!5.71e-10!625;UBERON:0007100!6.06e-10!27;UBERON:0000490!7.89e-10!138;UBERON:0000480!8.19e-10!626;UBERON:0000479!1.14e-09!787;UBERON:0004535!1.54e-09!110;UBERON:0001009!2.48e-09!113;UBERON:0002100!2.87e-09!216;UBERON:0000922!5.84e-09!612;UBERON:0004111!7.15e-09!241;UBERON:0002050!8.83e-09!605;UBERON:0005423!8.83e-09!605;UBERON:0000923!1.81e-08!604;UBERON:0005291!1.81e-08!604;UBERON:0006598!1.81e-08!604;UBERON:0002532!1.81e-08!604;UBERON:0003104!8.13e-08!238;UBERON:0009142!8.13e-08!238;UBERON:0004573!1.25e-07!33;UBERON:0004571!1.25e-07!33;UBERON:0001637!1.44e-07!42;UBERON:0003509!1.44e-07!42;UBERON:0004572!1.44e-07!42;UBERON:0002049!1.70e-07!79;UBERON:0007798!1.70e-07!79;UBERON:0000025!3.67e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;7.39e-11;22!UBERON:0002385;5.57e-09;31!UBERON:0001015;5.57e-09;31!UBERON:0000383;5.57e-09;31!UBERON:0007100;7.43e-09;25!UBERON:0000075;4.18e-07;16!UBERON:0001134;8.46e-07;16!UBERON:0002036;8.46e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.89e-26,73;UBERON:0002329,4.02e-26,71;UBERON:0003059,4.02e-26,71;UBERON:0007282,4.02e-26,71;UBERON:0004290,4.02e-26,71;UBERON:0009618,4.02e-26,71;UBERON:0003077,1.74e-25,72;UBERON:0007285,1.74e-25,72;UBERON:0002385,9.02e-25,64;UBERON:0001015,9.02e-25,64;UBERON:0000383,9.02e-25,64;UBERON:0001134,1.36e-24,62;UBERON:0002036,1.36e-24,62;UBERON:0003082,1.36e-24,62;UBERON:0005256,2.49e-22,122;UBERON:0007503,4.89e-22,78;UBERON:0003104,1.78e-21,160;UBERON:0009142,1.78e-21,160;UBERON:0000486,1.85e-20,83;UBERON:0000490,5.10e-14,148;UBERON:0000948,3.76e-12,24;UBERON:0005498,3.76e-12,24;UBERON:0004140,3.76e-12,24;UBERON:0009881,3.76e-12,24;UBERON:0004141,3.76e-12,24;UBERON:0003084,3.76e-12,24;UBERON:0007005,3.76e-12,24;UBERON:0004139,3.76e-12,24;UBERON:0004291,3.76e-12,24;UBERON:0000926,2.70e-11,315;UBERON:0004120,2.70e-11,315;UBERON:0006603,2.70e-11,315;UBERON:0004872,6.48e-11,83;UBERON:0002100,7.47e-11,199;UBERON:0007100,4.62e-10,27;UBERON:0002204,6.54e-09,167;UBERON:0004535,1.31e-08,109;UBERON:0000479,3.02e-08,773;UBERON:0001009,5.13e-08,112;UBERON:0000483,8.91e-08,306;UBERON:0000119,1.84e-07,309;UBERON:0000075,4.51e-07,16;UBERON:0002050,5.15e-07,564;UBERON:0000923,5.92e-07,560;UBERON:0010316,5.92e-07,560;UBERON:0005291,5.92e-07,560;UBERON:0006598,5.92e-07,560;UBERON:0010317,5.92e-07,560;UBERON:0002532,5.92e-07,560 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,5.68547886084148,1.04474251279935,0.491467873003018,0,0,0,10.3963736486439,6.62794751455832,0.672325146451775,0,0.730310090387373,0.487932798790507,0,0,0,1.14494394852423,0,0.251085279189606,0.0764134057479513,0.0821005894499457,0,0.786728553697808,0,0.154816123316076,0,0,0,0,0,0.587200878669695,0,0,0.217010870715852,0.447830948479849,0.32389366601898,0.77272670290256,0.290796477559129,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0.188242339542605,0,0,0,0.320929027076094,0.639337125799041,0.329851300186716,0.199463657621632,0.426224750532694,0.580418477257168,0,0,0,0.521482918420201,0.217188844705117,0.605399502633369,0,0,0.422510572623884,0.425208599930087,0,0.112328631146495,0,0.32145117339416,0.285012743741249,0.79566670879636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.8278539047697,8.71911117614727,2.9408389224012,0,0,0,0,0.486634870302636,0,0,0.087834785693126,1.0478326039817,0,0,0,0,0,0,0,0,0.198762407366705,1.72046919021225,0,0,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0,0.367663080345869,0,0.267899184852239,0,0.225222960966644,0,0,0,0,0,0,2.48485975847659,0.886413581652058,0.529636723252875,17.2101972449288,5.32002573297536,0,1.06748995729705,0.74000264525148,19.917506265585,8.48677234039035,18.9615807611612,3.17850598054356,3.45705554687999,4.92075006850973,6.86752169026705,2.2818872861778,17.3360469440089,3.40560046066918,0.161872944368132,0.140450806702248,8.9827835352153,3.4393608847295,12.6057453034434,10.6920257155385,5.93440630268536,2.73048408581408,2.15585442544872,8.24846958374924,10.635074189117,6.09541054065202,5.26773145057006,1.22595118319608,8.11285518095623,2.1552114800404,0.179389635688862,1.49490172172997,1.48352330811693,2.70081986475962,3.81294358182224,2.06112432036503,2.23340227597908,0.168776332241266,0.0974370051611986,0.252433774244115,1.01254888506529,1.13152239773168,0.355009592516614,0,0.339121184620975,0,0,0,0,0,0.69716365721711,0.207322110030741,0,0,1.56449532329816,0,1.38134921352481,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,2.057870056657,5.88034845542168,0,0.982827216677626,10.6342183202653,0,0,1.02940686179115,0,0,0.100528972411631,0,1.3032332212413,9.35941306751621,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0.492434012174795,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0.144119953416961,0,0.317489471460845,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.2933531432838,0,3.57656445851882,9.298330278116,1.59562869950922,0,1.02882949704857,0,2.93064396917709,58.0490654252079,0.542621605391443,0,17.5897539518617,55.0857520550946,2.37585561880029,0,0,0.099972991182057,1.2162378064119,0.502257091432126,0,2.63587341040741,11.4861935834114,2.85273810081437,2.31650090668127,4.31500277355805,0,0,0,0,0,1.52456774533478,0,3.09315525111078,0.837581326671744,3.82763250991898,0,0,0,7.23879801142925,10.5035809422532,2.98391526069709,0.415941723061614,0,0,0.35142424497814,10.2321673907424,0,4.1389228517002,5.31380478828349,2.76553752812555,8.34082698893595,1.17480694477644,0,0.206768026122887,0,0.106727557803444,0,0,1.20956117331872,0.248107807818777,0,0,0.256278298511402,0,0,0,6.9394362211195,5.85953693533319,14.5365066144442,32.7130290385681,7.78609535681727,0,0,0,30.5406432117854,26.9494928649941,31.6009840052212,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0.219259876645935,0,0,0,0.325378394664303,8.86152700170411,0,0,0,0,1.6068392984416,3.57681657680851,5.69979883324184,7.21467271212809,2.20538515975249,8.37877909972534,4.78555089916954,3.74997160630844,2.40386496246191,0,0.384380134730212,0,0,0.929691098594572,3.1481234683064,1.3940745403212,5.5446044431696,2.66153015158511,4.34966496037536,0,5.58187058293766,3.34942532423701,1.58189712359363,8.76898892049594,0.255897791311334,5.13526785640705,20.6832111151859,2.35484592059769,15.6489038097484,25.5319437654531,15.5512371096306,3.63928466831969,4.75530963519025,2.10629228119491,5.36397112998549,13.4042419297206,3.16950440270266,37.4009757257881,43.9770893376047,20.3414609916437,4.96228809191512,9.28814565337708,5.26141062304515,5.20897980840019,8.52663177660623,0.202910376962704,1.239293992399,7.04239006330604,1.29070216983646,0.785992328104969,0,52.1498764183779,1.68886108238131,0.658589785919804,1.13841952129715,3.49934720244983,0,0,0,5.55448424582997,0,0,0,0,1.01489521846434,0,0,0,0,0.648473311192717,0,0,0,0,0.245040215981032,0,0,0,0,5.18906365725323,0,0,0,0,0,0,0,0,0,0,0.851692475380653,4.46556948182494,0,0,0,0,0,0,0,0,0,282.956497097228,1.61158997199083,0.485442086998054,0,0,0,0,0,0.994147647766298,0.422008249231538,0.222617410045812,0,0,3.78571177677032,0.276283915531148,0,0,0,0,0,0,0,5.91860433821602,2.3948309234694,0,0.969332746095218,1.66982576691332,0,0,0,2.89999830173917,0,0,0,0,0,0.347249989866585,0,0.60298219312704,1.52581736317083,0.221158519862449,0,0.438770794307945,0,0,3.84751292518985,0,0,0,0,0.31900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| ||
|short_description=p3@HGF | |||
}} | }} |
Latest revision as of 18:04, 19 September 2015
Short description: | p3@HGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HGF_5end |
Coexpression cluster: | C154_adenocarcinoma_Mesenchymal_Cardiac_small_sacrococcigeal_Smooth_Prostate |
Association with transcript: | 0bp_to_ENST00000453411_5end |
EntrezGene: | HGF |
HGNC: | 4893 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 4.44e-25 | 58 |
myoblast | 4.44e-25 | 58 |
multi-potent skeletal muscle stem cell | 4.44e-25 | 58 |
muscle cell | 1.17e-24 | 55 |
electrically responsive cell | 4.56e-23 | 61 |
electrically active cell | 4.56e-23 | 61 |
smooth muscle cell | 1.24e-16 | 43 |
smooth muscle myoblast | 1.24e-16 | 43 |
fibroblast | 2.82e-14 | 76 |
cardiocyte | 3.85e-10 | 16 |
vascular associated smooth muscle cell | 1.52e-09 | 32 |
multi fate stem cell | 5.52e-09 | 427 |
somatic stem cell | 2.19e-08 | 433 |
mesodermal cell | 8.02e-08 | 121 |
stem cell | 1.25e-07 | 441 |
cell of skeletal muscle | 2.53e-07 | 9 |