FFCP PHASE1:Hg19::chr7:81399355..81399373,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:81399355..81399373,- to FFCP PHASE1:Hg19::chr7:81399355..81399373,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3082 | |EntrezGene=3082 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4893 | |HGNC=4893 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000457544_5end | |||
|cluster_id=chr7:81399355..81399373,- | |||
|coexpression_cluster_id=C154 | |||
|description=CAGE_peak_1_at_HGF_5end | |||
|id=chr7:81399355..81399373,- | |||
|ontology_enrichment_celltype=CL:0000680!2.91e-20!57;CL:0000056!2.91e-20!57;CL:0000355!2.91e-20!57;CL:0000187!1.53e-19!54;CL:0000055!4.64e-19!180;CL:0000183!2.20e-18!59;CL:0000393!4.58e-18!60;CL:0000211!4.58e-18!60;CL:0000192!3.98e-14!42;CL:0000514!3.98e-14!42;CL:0000057!7.47e-12!75;CL:0000048!3.16e-09!430;CL:0002494!4.90e-09!16;CL:0000359!5.27e-09!32;CL:0000723!2.49e-08!436;CL:0000034!5.94e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0000187;2.02e-12;55!CL:0000192;9.81e-12;43!CL:0000393;4.55e-11;61!CL:0000211;4.55e-11;61!CL:0002494;2.19e-09;16!CL:0000359;4.09e-09;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.00e-22,58;CL:0000056,1.00e-22,58;CL:0000355,1.00e-22,58;CL:0000187,6.77e-22,55;CL:0000393,3.14e-20,61;CL:0000211,3.14e-20,61;CL:0000192,1.02e-15,43;CL:0000514,1.02e-15,43;CL:0000057,6.50e-11,76;CL:0000359,2.02e-09,32;CL:0002494,2.35e-09,16 | |||
|ontology_enrichment_development_v019=CL:0000355;1.65e-12;58!CL:0000514;9.81e-12;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.27e-23!83;UBERON:0002329!3.27e-23!83;UBERON:0003077!3.27e-23!83;UBERON:0003059!3.27e-23!83;UBERON:0007282!3.27e-23!83;UBERON:0009618!3.27e-23!83;UBERON:0007285!3.27e-23!83;UBERON:0002385!1.58e-20!63;UBERON:0001015!1.58e-20!63;UBERON:0000383!1.58e-20!63;UBERON:0004290!1.86e-20!70;UBERON:0001134!6.12e-20!61;UBERON:0002036!6.12e-20!61;UBERON:0003082!6.12e-20!61;UBERON:0005256!4.23e-16!143;UBERON:0007023!8.66e-16!115;UBERON:0000481!1.60e-15!347;UBERON:0000486!2.02e-14!82;UBERON:0000468!1.34e-13!659;UBERON:0002050!1.37e-12!605;UBERON:0005423!1.37e-12!605;UBERON:0000922!1.59e-12!612;UBERON:0000467!2.37e-12!625;UBERON:0000923!2.80e-12!604;UBERON:0005291!2.80e-12!604;UBERON:0006598!2.80e-12!604;UBERON:0002532!2.80e-12!604;UBERON:0000480!3.79e-12!626;UBERON:0000479!4.33e-12!787;UBERON:0000948!5.46e-12!24;UBERON:0005498!5.46e-12!24;UBERON:0004140!5.46e-12!24;UBERON:0009881!5.46e-12!24;UBERON:0004141!5.46e-12!24;UBERON:0003084!5.46e-12!24;UBERON:0007005!5.46e-12!24;UBERON:0004139!5.46e-12!24;UBERON:0004291!5.46e-12!24;UBERON:0007100!5.56e-12!27;UBERON:0000477!7.22e-12!286;UBERON:0002204!7.97e-12!167;UBERON:0000475!1.50e-11!365;UBERON:0004872!7.00e-11!84;UBERON:0000119!1.40e-10!312;UBERON:0000483!1.46e-10!309;UBERON:0004111!3.65e-10!241;UBERON:0000025!4.31e-09!194;UBERON:0000926!6.18e-09!448;UBERON:0004120!6.18e-09!448;UBERON:0006603!6.18e-09!448;UBERON:0002100!1.01e-08!216;UBERON:0001009!1.61e-08!113;UBERON:0000490!1.66e-08!138;UBERON:0004535!3.38e-08!110;UBERON:0003104!5.80e-08!238;UBERON:0009142!5.80e-08!238;UBERON:0004573!4.08e-07!33;UBERON:0004571!4.08e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.42e-11;25!UBERON:0000948;1.46e-11;22!UBERON:0002385;5.79e-10;31!UBERON:0001015;5.79e-10;31!UBERON:0000383;5.79e-10;31 | |||
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| ||
|short_description=p1@HGF | |||
}} | }} |
Latest revision as of 18:05, 19 September 2015
Short description: | p1@HGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HGF_5end |
Coexpression cluster: | C154_adenocarcinoma_Mesenchymal_Cardiac_small_sacrococcigeal_Smooth_Prostate |
Association with transcript: | 0bp_to_ENST00000457544_5end |
EntrezGene: | HGF |
HGNC: | 4893 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.00e-22 | 58 |
myoblast | 1.00e-22 | 58 |
multi-potent skeletal muscle stem cell | 1.00e-22 | 58 |
muscle cell | 6.77e-22 | 55 |
electrically responsive cell | 3.14e-20 | 61 |
electrically active cell | 3.14e-20 | 61 |
smooth muscle cell | 1.02e-15 | 43 |
smooth muscle myoblast | 1.02e-15 | 43 |
fibroblast | 6.50e-11 | 76 |
vascular associated smooth muscle cell | 2.02e-09 | 32 |
cardiocyte | 2.35e-09 | 16 |