FFCP PHASE1:Hg19::chr6:74171448..74171493,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:74171448..74171493,+
|short_description=p1@MTO1
|description=CAGE_peak_1_at_MTO1_5end
|association_with_transcript=0bp_to_ENST00000357845,ENST00000370300,E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25821 | |EntrezGene=25821 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19261 | |HGNC=19261 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2Z2,E7EWI1,E9PHR8,E7EWX0 | |UniProt=Q9Y2Z2,E7EWI1,E9PHR8,E7EWX0 | ||
|association_with_transcript=0bp_to_ENST00000357845,ENST00000370300,ENST00000370305,ENST00000370308,ENST00000415228,ENST00000442897,ENST00000521032,NM_001123226,NM_012123,NM_133645,uc003pgy.3,uc003pgz.3,uc003pha.3,uc003phb.3,uc010kav.2_5end | |||
|cluster_id=chr6:74171448..74171493,+ | |||
|description=CAGE_peak_1_at_MTO1_5end | |||
|id=chr6:74171448..74171493,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.71e-18!53;CL:0000051!1.71e-18!53;CL:0000838!3.96e-18!52;CL:0000791!2.23e-10!18;CL:0000789!2.23e-10!18;CL:0002420!2.23e-10!18;CL:0002419!2.23e-10!18;CL:0000790!2.23e-10!18;CL:0000945!6.64e-10!24;CL:0000826!6.64e-10!24;CL:0000084!1.56e-08!25;CL:0000827!1.56e-08!25;CL:0000236!2.82e-08!14;CL:0000625!1.39e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.30e-11;53!CL:0000791;2.47e-10;18!CL:0000789;2.47e-10;18!CL:0002419;2.47e-10;18!CL:0000945;4.60e-10;24!CL:0000084;1.47e-08;25!CL:0000236;2.85e-08;13!CL:0000625;1.38e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.71e-18,53;CL:0000051,1.71e-18,53;CL:0000838,3.96e-18,52;CL:0000791,2.23e-10,18;CL:0000789,2.23e-10,18;CL:0002420,2.23e-10,18;CL:0002419,2.23e-10,18;CL:0000790,2.23e-10,18;CL:0000945,6.64e-10,24;CL:0000826,6.64e-10,24;CL:0000084,1.56e-08,25;CL:0000827,1.56e-08,25;CL:0000236,2.82e-08,14;CL:0000625,1.39e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;1.30e-11;53!CL:0000790;2.47e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.50e-23!115;UBERON:0001049!2.00e-09!57;UBERON:0005068!2.00e-09!57;UBERON:0006241!2.00e-09!57;UBERON:0007135!2.00e-09!57;UBERON:0003080!2.37e-08!42;UBERON:0002780!4.05e-08!41;UBERON:0001890!4.05e-08!41;UBERON:0006240!4.05e-08!41;UBERON:0000073!1.20e-07!94;UBERON:0001016!1.20e-07!94;UBERON:0005743!2.30e-07!86;UBERON:0001017!3.57e-07!82;UBERON:0002616!5.67e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;8.86e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.93e-23,114;UBERON:0001049,3.40e-09,56;UBERON:0005068,3.40e-09,56;UBERON:0006241,3.40e-09,56;UBERON:0007135,3.40e-09,56;UBERON:0000073,9.39e-09,53;UBERON:0002616,9.39e-09,53;UBERON:0002780,4.05e-08,41;UBERON:0001890,4.05e-08,41;UBERON:0003080,4.05e-08,41;UBERON:0006240,4.05e-08,41;UBERON:0001016,2.94e-07,89;UBERON:0001017,5.58e-07,81 | |||
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| ||
|short_description=p1@MTO1 | |||
}} | }} |
Latest revision as of 18:06, 19 September 2015
Short description: | p1@MTO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MTO1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000357845, ENST00000370300, ENST00000370305, ENST00000370308, ENST00000415228, ENST00000442897, ENST00000521032, NM_001123226, NM_012123, NM_133645, uc003pgy.3, uc003pgz.3, uc003pha.3, uc003phb.3, uc010kav.2_5end |
EntrezGene: | MTO1 |
HGNC: | 19261 |
UniProt: | Q9Y2Z2E7EWI1E9PHR8E7EWX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.71e-18 | 53 |
common lymphoid progenitor | 1.71e-18 | 53 |
lymphoid lineage restricted progenitor cell | 3.96e-18 | 52 |
mature alpha-beta T cell | 2.23e-10 | 18 |
alpha-beta T cell | 2.23e-10 | 18 |
immature T cell | 2.23e-10 | 18 |
mature T cell | 2.23e-10 | 18 |
immature alpha-beta T cell | 2.23e-10 | 18 |
lymphocyte of B lineage | 6.64e-10 | 24 |
pro-B cell | 6.64e-10 | 24 |
T cell | 1.56e-08 | 25 |
pro-T cell | 1.56e-08 | 25 |
B cell | 2.82e-08 | 14 |
CD8-positive, alpha-beta T cell | 1.39e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.93e-23 | 114 |
neural tube | 3.40e-09 | 56 |
neural rod | 3.40e-09 | 56 |
future spinal cord | 3.40e-09 | 56 |
neural keel | 3.40e-09 | 56 |
regional part of nervous system | 9.39e-09 | 53 |
regional part of brain | 9.39e-09 | 53 |
regional part of forebrain | 4.05e-08 | 41 |
forebrain | 4.05e-08 | 41 |
anterior neural tube | 4.05e-08 | 41 |
future forebrain | 4.05e-08 | 41 |
nervous system | 2.94e-07 | 89 |
central nervous system | 5.58e-07 | 81 |