FFCP PHASE1:Hg19::chr7:81399438..81399454,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3082 | |EntrezGene=3082 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4893 | |HGNC=4893 | ||
|TSSclassifier=strong | |||
|UniProt=C9JBP9,P14210 | |UniProt=C9JBP9,P14210 | ||
|association_with_transcript=0bp_to_ENST00000394769,NM_000601,NM_001010931,NM_001010932,NM_001010933,NM_001010934,uc003uhl.2,uc003uhm.2,uc003uhn.1,uc003uho.1,uc003uhp.2_5end | |association_with_transcript=0bp_to_ENST00000394769,NM_000601,NM_001010931,NM_001010932,NM_001010933,NM_001010934,uc003uhl.2,uc003uhm.2,uc003uhn.1,uc003uho.1,uc003uhp.2_5end | ||
|cluster_id=chr7:81399438..81399454,- | |||
|coexpression_cluster_id=C2904 | |||
|description=CAGE_peak_2_at_HGF_5end | |description=CAGE_peak_2_at_HGF_5end | ||
|id=chr7:81399438..81399454,- | |id=chr7:81399438..81399454,- | ||
|ontology_enrichment_celltype=CL:0000187!1.93e-17!54;CL:0000680!3.08e-17!57;CL:0000056!3.08e-17!57;CL:0000355!3.08e-17!57;CL:0000393!4.44e-16!60;CL:0000211!4.44e-16!60;CL:0000183!9.25e-15!59;CL:0000055!2.75e-13!180;CL:0000192!7.89e-12!42;CL:0000514!7.89e-12!42;CL:0000048!1.67e-09!430;CL:0000723!7.56e-09!436;CL:0000034!1.04e-08!444;CL:0002494!4.55e-08!16;CL:0000057!6.54e-07!75;CL:0000359!9.74e-07!32 | |ontology_enrichment_celltype=CL:0000187!1.93e-17!54;CL:0000680!3.08e-17!57;CL:0000056!3.08e-17!57;CL:0000355!3.08e-17!57;CL:0000393!4.44e-16!60;CL:0000211!4.44e-16!60;CL:0000183!9.25e-15!59;CL:0000055!2.75e-13!180;CL:0000192!7.89e-12!42;CL:0000514!7.89e-12!42;CL:0000048!1.67e-09!430;CL:0000723!7.56e-09!436;CL:0000034!1.04e-08!444;CL:0002494!4.55e-08!16;CL:0000057!6.54e-07!75;CL:0000359!9.74e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000187;1.45e-11;55!CL:0000393;9.18e-10;61!CL:0000211;9.18e-10;61!CL:0002494;9.19e-10;16!CL:0000192;1.00e-09;43!CL:0000188;2.56e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,1.28e-19,55;CL:0000680,4.91e-19,58;CL:0000056,4.91e-19,58;CL:0000355,4.91e-19,58;CL:0000393,2.71e-17,61;CL:0000211,2.71e-17,61;CL:0000192,6.12e-12,43;CL:0000514,6.12e-12,43;CL:0002494,8.62e-10,16;CL:0000048,8.06e-08,427;CL:0000188,2.44e-07,9;CL:0000723,2.67e-07,433;CL:0000057,4.65e-07,76;CL:0000034,5.13e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000355;2.32e-11;58!CL:0000514;1.00e-09;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.21e-20!83;UBERON:0002329!8.21e-20!83;UBERON:0003077!8.21e-20!83;UBERON:0003059!8.21e-20!83;UBERON:0007282!8.21e-20!83;UBERON:0009618!8.21e-20!83;UBERON:0007285!8.21e-20!83;UBERON:0002385!1.56e-17!63;UBERON:0001015!1.56e-17!63;UBERON:0000383!1.56e-17!63;UBERON:0004290!1.80e-17!70;UBERON:0001134!2.83e-17!61;UBERON:0002036!2.83e-17!61;UBERON:0003082!2.83e-17!61;UBERON:0005256!1.17e-13!143;UBERON:0002204!5.09e-13!167;UBERON:0000486!1.36e-12!82;UBERON:0000481!4.80e-11!347;UBERON:0000922!7.86e-11!612;UBERON:0002050!1.30e-10!605;UBERON:0005423!1.30e-10!605;UBERON:0000479!1.71e-10!787;UBERON:0000923!2.25e-10!604;UBERON:0005291!2.25e-10!604;UBERON:0006598!2.25e-10!604;UBERON:0002532!2.25e-10!604;UBERON:0000948!4.38e-10!24;UBERON:0005498!4.38e-10!24;UBERON:0004140!4.38e-10!24;UBERON:0009881!4.38e-10!24;UBERON:0004141!4.38e-10!24;UBERON:0003084!4.38e-10!24;UBERON:0007005!4.38e-10!24;UBERON:0004139!4.38e-10!24;UBERON:0004291!4.38e-10!24;UBERON:0007023!5.69e-10!115;UBERON:0000468!1.57e-09!659;UBERON:0000926!1.70e-09!448;UBERON:0004120!1.70e-09!448;UBERON:0006603!1.70e-09!448;UBERON:0000467!5.15e-09!625;UBERON:0000483!6.01e-09!309;UBERON:0000477!6.73e-09!286;UBERON:0004872!6.84e-09!84;UBERON:0000480!7.21e-09!626;UBERON:0000119!7.55e-09!312;UBERON:0000490!9.80e-09!138;UBERON:0007100!1.36e-08!27;UBERON:0004535!2.98e-08!110;UBERON:0001009!8.07e-08!113;UBERON:0000025!8.86e-08!194;UBERON:0004111!1.63e-07!241;UBERON:0000475!1.66e-07!365;UBERON:0002100!7.86e-07!216 | |ontology_enrichment_uberon=UBERON:0000914!8.21e-20!83;UBERON:0002329!8.21e-20!83;UBERON:0003077!8.21e-20!83;UBERON:0003059!8.21e-20!83;UBERON:0007282!8.21e-20!83;UBERON:0009618!8.21e-20!83;UBERON:0007285!8.21e-20!83;UBERON:0002385!1.56e-17!63;UBERON:0001015!1.56e-17!63;UBERON:0000383!1.56e-17!63;UBERON:0004290!1.80e-17!70;UBERON:0001134!2.83e-17!61;UBERON:0002036!2.83e-17!61;UBERON:0003082!2.83e-17!61;UBERON:0005256!1.17e-13!143;UBERON:0002204!5.09e-13!167;UBERON:0000486!1.36e-12!82;UBERON:0000481!4.80e-11!347;UBERON:0000922!7.86e-11!612;UBERON:0002050!1.30e-10!605;UBERON:0005423!1.30e-10!605;UBERON:0000479!1.71e-10!787;UBERON:0000923!2.25e-10!604;UBERON:0005291!2.25e-10!604;UBERON:0006598!2.25e-10!604;UBERON:0002532!2.25e-10!604;UBERON:0000948!4.38e-10!24;UBERON:0005498!4.38e-10!24;UBERON:0004140!4.38e-10!24;UBERON:0009881!4.38e-10!24;UBERON:0004141!4.38e-10!24;UBERON:0003084!4.38e-10!24;UBERON:0007005!4.38e-10!24;UBERON:0004139!4.38e-10!24;UBERON:0004291!4.38e-10!24;UBERON:0007023!5.69e-10!115;UBERON:0000468!1.57e-09!659;UBERON:0000926!1.70e-09!448;UBERON:0004120!1.70e-09!448;UBERON:0006603!1.70e-09!448;UBERON:0000467!5.15e-09!625;UBERON:0000483!6.01e-09!309;UBERON:0000477!6.73e-09!286;UBERON:0004872!6.84e-09!84;UBERON:0000480!7.21e-09!626;UBERON:0000119!7.55e-09!312;UBERON:0000490!9.80e-09!138;UBERON:0007100!1.36e-08!27;UBERON:0004535!2.98e-08!110;UBERON:0001009!8.07e-08!113;UBERON:0000025!8.86e-08!194;UBERON:0004111!1.63e-07!241;UBERON:0000475!1.66e-07!365;UBERON:0002100!7.86e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000948;1.10e-10;22!UBERON:0007100;9.21e-09;25 | |||
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| ||
|short_description=p2@HGF | |short_description=p2@HGF | ||
}} | }} |
Latest revision as of 18:07, 19 September 2015
Short description: | p2@HGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HGF_5end |
Coexpression cluster: | C2904_Mesenchymal_adenocarcinoma_Cardiac_small_sacrococcigeal_Preadipocyte_Smooth |
Association with transcript: | 0bp_to_ENST00000394769, NM_000601, NM_001010931, NM_001010932, NM_001010933, NM_001010934, uc003uhl.2, uc003uhm.2, uc003uhn.1, uc003uho.1, uc003uhp.2_5end |
EntrezGene: | HGF |
HGNC: | 4893 |
UniProt: | C9JBP9P14210 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 1.28e-19 | 55 |
muscle precursor cell | 4.91e-19 | 58 |
myoblast | 4.91e-19 | 58 |
multi-potent skeletal muscle stem cell | 4.91e-19 | 58 |
electrically responsive cell | 2.71e-17 | 61 |
electrically active cell | 2.71e-17 | 61 |
smooth muscle cell | 6.12e-12 | 43 |
smooth muscle myoblast | 6.12e-12 | 43 |
cardiocyte | 8.62e-10 | 16 |
multi fate stem cell | 8.06e-08 | 427 |
cell of skeletal muscle | 2.44e-07 | 9 |
somatic stem cell | 2.67e-07 | 433 |
fibroblast | 4.65e-07 | 76 |
stem cell | 5.13e-07 | 441 |