FFCP PHASE1:Hg19::chr1:935519..935532,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24149 | |||
|TSSclassifier=strong | |||
|UniProt=E9PB28,Q9HCC6 | |||
|association_with_transcript=19bp_to_ENST00000428771,NM_001142467,NM_021170,uc001aci.2,uc010nyc.1_5end | |||
|cluster_id=chr1:935519..935532,- | |||
|description=CAGE_peak_4_at_HES4_5end | |||
|id=chr1:935519..935532,- | |||
|ontology_enrichment_celltype=CL:0000066!4.74e-19!254 | |||
|ontology_enrichment_celltype_v019=CL:1000507;3.51e-09;10!CL:1000494;3.51e-09;10!CL:1000449;3.75e-09;15!CL:1000497;7.52e-08;17!CL:0002518;7.52e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,2.85e-09,15;CL:1000507,3.11e-09,10;CL:1000494,3.11e-09,10;CL:0000066,3.68e-08,253;CL:1000497,5.93e-08,17;CL:0002518,5.93e-08,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.42e-12!143;DOID:305!5.99e-11!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000064!5.30e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.51e-09;10!UBERON:0009773;3.51e-09;10!UBERON:0001231;3.51e-09;10!UBERON:0004810;3.51e-09;10!UBERON:0006555;3.75e-09;15!UBERON:0004819;3.75e-09;15!UBERON:0001285;3.75e-09;15!UBERON:0007684;3.75e-09;15!UBERON:0005383;5.60e-07;3!UBERON:0005382;5.60e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,2.85e-09,15;UBERON:0009773,2.85e-09,15;UBERON:0001231,2.85e-09,15;UBERON:0001285,2.85e-09,15;UBERON:0007684,2.85e-09,15;UBERON:0004208,2.85e-09,15;UBERON:0004810,3.11e-09,10;UBERON:0006555,1.43e-08,16;UBERON:0004819,1.43e-08,16;UBERON:0005383,2.82e-07,3;UBERON:0005382,2.82e-07,3 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,0,0.446961094427288,0.872338524100369,2.53299878168311,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0.684372125364421,1.50651167513763,0.764134057479513,0.164201178899891,0.236132343941038,0.393364276848904,0,0.464448369948228,0.919421224478927,0.6024118375565,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0.755751887377619,0.485168122375632,0.232429036905685,0,0,0,0.256160706529101,0,0,0.645484683583826,0,0.188242339542605,1.09162460023138,0,0,0.641858054152187,0,0,0,0,0.870627715885752,0,0,0,1.0429658368404,0.217188844705117,0,0,0.316462387440884,0.633765858935825,0.212604299965044,0.209658645508376,0,0,0,1.42506371870624,0.39783335439818,1.0959849225878,0,0,0,0,0,0,0,0,0,1.17447437874188,0,0,0,0,0,0.393010762749165,0.616804496998528,0,0.651844533267181,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0.444859689486181,0,0,0,0,0,0,0.318565414324097,0.651083453856419,0,0,0,0,0.236777252044017,0,0,0,0.289648807765598,0,0,0.12786256184353,0,0,0,0,0,0.378139268656271,1.33037638477538,0.527008714158756,0.392937226493138,0,0.370784442784429,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,1.37559020970034,0.835979866147242,0,0.35576626268671,0.66944122552934,0,0.760272105718513,1.22031028774085,0,2.43042584364528,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0.549605231791222,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,2.71334303258876,0.311211035399766,0.404132016209064,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0.741800787835671,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0.680593098960126,0,0.427114777637135,0,0,0.206105058476878,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.460249493211497,0,0,0.10075209822764,0.508681776931463,0.193260853163297,0.272746120590835,0,0.853815942907168,0,0,0.518305275076852,0.252320850875628,0,0,0,0,0.928735856063958,0.721879481669586,0.591534000199219,1.18009283054671,0.964044119533928,1.32352767278873,1.08939722046203,1.66089433377768,1.34831308160164,0.98110732562673,0.769494313892781,0,1.40241773803446,0.8231480226628,1.47008711385542,0,0,0,2.20731549707325,0.368965315629341,0,0.439001141634502,0,0.301586917234893,0,0.651616610620649,0,1.44331342025273,0.231860809950154,0.821860859650752,0.433099343283221,1.38895653772983,0.380508304469197,0.790204397959275,0.858486162094873,0,0,0,0,0.16798212819886,0.425325291727159,0.179117045405697,0,0.766765358330422,0,0,0.621984346622316,0,0.50496973370552,1.0159663086747,1.90994212779139,0,3.4214489204541,0.616964956219941,2.10240140490742,0,0.112131084345361,0.43596006883328,0.07333828582095,0,0,0,0.531876233169741,2.08014873822732,0,0,0,0,0,0,0.325736184293735,1.42156779497018,0,0.301439377059586,0,0.799783929456456,0,0,0,0.718874566474748,0,0,0,0,0,0,0.394061520403854,0.431255149719035,0.385029108839245,0.254094624222463,0,3.09315525111078,3.18280904135263,3.18969375826582,0,0,0,0.12269149171914,0,0,1.45579603071565,1.42743191037729,0.630809660135739,0,0,0,2.0694614258501,0,0,0,0.391602314925481,0,0.206768026122887,0.431428401637234,0.106727557803444,1.21251028578504,0,0.30239029332968,0,0.61384789315225,0,0,1.02341449813341,0.160853921143607,0,0,0.177561725313127,0,0,0,0.362578348774867,0.40101294060657,1.56537681191024,0.114814448164607,0.364182336013434,0.524497659837696,2.25599806453706,0.616122696835318,1.56869953835371,2.92278449306521,1.26661954671451,0,0.170093705276516,0.431831832204279,1.54227252690289,1.35473218771926,4.51520796469368,0.254876273045038,2.49322802678617,0.671624264166535,0,0,0.769350375349168,0.984043937099117,0.325378394664303,0,0.366277859273374,0.577566499444116,0,0,0,0,0,0,0,0,0,0.170453254832202,0.0890320356467374,0.330569830721956,1.15314040419064,0.510450849978337,1.11273558941105,0,0,0,0.308033580176089,0.532306030317022,0,0,0.143124886741991,0,0,0.571890581771475,0.255897791311334,0,0,1.56989728039846,0.539617372749944,0,0,0.202182481573316,1.58510321173008,0,0.48763373908959,0.487426979262569,0,0.136499911407986,0,0,0,0,0,0,0,0.811641507850816,0.6196469961995,0,0,0.491245205065606,0.35667105148125,0.354761064070598,0,0,0,0,0.384888450902048,0.670302275535787,2.17781969722645,0,0.43050537267123,0,0.443430153536676,0.918893600827838,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,2.45040215981032,0,0,0.284567373393656,0.797131363644112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0.242721043499027,0,0.284136146806413,0,0,0,0,1.1253553312841,0.333926115068718,1.97764649072111,1.68900326502395,2.19172787076177,0,0.251932747854276,0.409074730008619,0,0.622079175323615,0.269605053441981,0.537063524026827,0,0.394573622547734,0,1.11136990144637,0.969332746095218,0.649376687132959,1.99613798001194,1.82299432759663,2.27395999990109,0,0.227586896570999,0.254253650292766,0.709163045303809,1.03423011972439,0.583209226766509,0.347249989866585,1.77148277162768,2.89431452700979,0,0,0.591095237907095,0.87754158861589,1.743015416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| |||
|short_description=p4@HES4 | |||
}} |
Latest revision as of 21:13, 19 September 2015
Short description: | p4@HES4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HES4_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENST00000428771, NM_001142467, NM_021170, uc001aci.2, uc010nyc.1_5end |
EntrezGene: | HES4 |
HGNC: | 24149 |
UniProt: | E9PB28Q9HCC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 2.85e-09 | 15 |
kidney tubule cell | 3.11e-09 | 10 |
nephron tubule epithelial cell | 3.11e-09 | 10 |
epithelial cell | 3.68e-08 | 253 |
kidney cell | 5.93e-08 | 17 |
kidney epithelial cell | 5.93e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 2.85e-09 | 15 |
renal tubule | 2.85e-09 | 15 |
nephron tubule | 2.85e-09 | 15 |
nephron | 2.85e-09 | 15 |
uriniferous tubule | 2.85e-09 | 15 |
nephrogenic mesenchyme | 2.85e-09 | 15 |
nephron tubule epithelium | 3.11e-09 | 10 |
excretory tube | 1.43e-08 | 16 |
kidney epithelium | 1.43e-08 | 16 |
caudate-putamen | 2.82e-07 | 3 |
dorsal striatum | 2.82e-07 | 3 |