FFCP PHASE1:Hg19::chr10:90983516..90983545,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:90983516..90983545,- to FFCP PHASE1:Hg19::chr10:90983516..90983545,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3988 | |EntrezGene=3988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=6617 | |HGNC=6617 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-31bp_to_ENST00000540050_5end | |||
|cluster_id=chr10:90983516..90983545,- | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_9_at_LIPA_5end | |||
|id=chr10:90983516..90983545,- | |||
|ontology_enrichment_celltype=CL:0002194!6.61e-08!63;CL:0000576!6.61e-08!63;CL:0000040!6.61e-08!63;CL:0000559!6.61e-08!63;CL:0002009!2.48e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000235;9.65e-53;6!CL:0000840;3.17e-14;5!CL:0002619;1.78e-12;3!CL:0000990;1.18e-09;8!CL:0000473;2.87e-09;39!CL:0000234;2.87e-09;39!CL:0000451;5.53e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,9.26e-53,6;CL:0002194,3.22e-19,59;CL:0000576,3.22e-19,59;CL:0000040,3.22e-19,59;CL:0000559,3.22e-19,59;CL:0002009,1.56e-18,61;CL:0000839,5.29e-17,66;CL:0000557,1.01e-16,67;CL:0000766,1.93e-15,72;CL:0000840,3.17e-14,5;CL:0001029,3.17e-14,5;CL:0002619,1.41e-12,3;CL:0000763,1.90e-11,108;CL:0000049,1.90e-11,108;CL:0000990,1.18e-09,8;CL:0002087,5.69e-09,115;CL:0002031,1.62e-08,120;CL:0000473,2.95e-08,48;CL:0000234,2.95e-08,48;CL:0000451,5.53e-08,10;CL:0000738,2.75e-07,136;CL:0002032,5.65e-07,161;CL:0000837,5.65e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;7.54e-10;1!UBERON:0006518;7.54e-10;1!UBERON:0008949;7.54e-10;1!UBERON:0000101;7.54e-10;1!UBERON:0002167;7.54e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.55e-14,76;UBERON:0001474,2.44e-13,82;UBERON:0002390,7.11e-13,98;UBERON:0003061,7.11e-13,98;UBERON:0004765,5.45e-12,90;UBERON:0002405,1.53e-11,93;UBERON:0002193,1.73e-11,108;UBERON:0001434,1.33e-10,100;UBERON:0002171,6.33e-10,1;UBERON:0006518,6.33e-10,1;UBERON:0008949,6.33e-10,1;UBERON:0000101,6.33e-10,1;UBERON:0002167,6.33e-10,1;UBERON:0003081,2.92e-08,203 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.140954404095971,1.0007329835313,0,0,0,0,0.783556884599516,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,1.56740831967947,0.971680998056939,2.06060454107349,0.436194716338694,0,0,0,0.411167888021826,0,0,1.0246428261164,0.236482229888585,0.344745680736619,0,0,0.376484679085209,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0.598390972864896,0.426224750532694,0.580418477257168,0,0,0.502497330513487,0.521482918420201,0.65156653411535,0,0,0,0.845021145247767,0.425208599930087,0,0,0.600707571366025,0,0.285012743741249,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0,0,0,0,0,0.786021525498329,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0,0,0.164437904603676,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.886917589850256,0.087834785693126,0.0654895377488563,0,0,14.9291801081154,14.6268979331384,19.4118622357543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0,0.860509862246441,0,0.560677600142307,0,0,0,0,0.653847612453835,0.302714855289863,0.576175924479999,0,0.624320153660641,0,0,0,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.358779271377724,0,0.211931901159562,0,0.103052529238439,0,0.37223371266318,0,0.292311015483596,0.504867548488229,0.0920498986422993,0,0,0,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,0.236613600079688,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0,0,1.4763109092493,0,0,0,1.26755034821831,0,0,0,0.368965315629341,0.171567810298526,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.433099343283221,0,0,0,0,3.20082107913617,3.04205544681009,2.37809859661965,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.190493682876507,0.763976851116555,1.17217447210047,0,0.205654985406647,0.300343057843917,0.571652865261156,0,0,0.1466765716419,0,0,0,0,1.04007436911366,0,0,0,0.285955987316295,1.08524321078289,0,0,0,0,0,0,0,13.378615870531,6.52934218861764,14.7583757638122,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.207970861530807,0.356857977594324,0,0.117141414992713,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0.215714200818617,0,0,0,0,0.248107807818777,0,0.561320188866147,0,0,0.160853921143607,0,0,0.177561725313127,0.164254312027618,0.519254429183621,0.116210378459959,0,0,0,0.114814448164607,0.728364672026868,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0.462145851343933,0.15350367472613,0,0.107420244868274,0.290033387828457,0.511359764496605,0,0.165284915360978,0.192190067365106,0,0,0,0.94443704049192,0,0,0,0,0,0.286249773483982,0,0.316379424718726,0.190630193923825,0,0,0.318203247925937,0,0.179872457583315,0.823611089208164,0.471249609382746,0,0,0.421258456238981,0,0.731140468893853,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0.6196469961995,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0.540031437238115,0.79312517629427,0,0,0.245040215981032,0,0,0,0.159426272728822,0,0,0.423347165447766,0,0.561594356226918,0.228234679033192,0,0,0,0,0,0,1.03051603426729,0.614481528616916,0,0,0.19538809540204,0,0,0.270455678475983,0.33307196799782,0,0.18714054040822,0.586032717087576,0,0.111443384277478,0,0,0,0,0,0,0,0,0.63337622438398,0,0,0,0.102268682502155,0,0,0,0,0,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0,0.341380344856499,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0,0.227884111694002,0,0,0,0.31900115973192,0,0,0,0,0.166211681900156,0,0,0,0,0,0.632994193584081,0,0.141353071433941,0,0,0.265372693510018,0.611030144933625,0,0,0.104421949505455,0.269604531922708,0,0,0,0,0.728341138602278,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0.520679215005393,0,0,0.17472666824203,0.171986032471617,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,0.195551382734803,0.160317640503067,0,0.19980960958213,0,0.114536596165916,0,0.14405479798815,0,0.235694034616795,0,0.104602846312333,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0.164831716762333,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0.335434687599266,0.0788057072991982,0,0.105600336519406,0.35857467866569,0.191915197319445,0,0,0,0.542999601753713,6.04955043840887,0.653174720218818,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,1.24271716604159,0,0,0.243585196761792,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0,0.285465333544967,0,0.936669811613763,0,0,0.233713309847224,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0.159296767163702,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0.796191777397232,0.400027764663154,0,0.336749488765919,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,1.01365464391844,0,0,0.303859956177382,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0.172214979660816,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0.205116364240755,0.252071696221718,0,0.322951291263702,0,0.0981477185010256,0,0.733714394086716,0.115525666150338,0.762764190934334,0,0,0,0,0,0,0.327543835020193,0,0,0.781078098613847,0.206686796501184,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0.230467975111559,0,0.339848664884159,0,0,0.111231401892069,0,0,0,0.913158720509496,0,0.47775168788705,0,0,0.116241425368125,0,0,0,0,0,0,0,0.170426809518315,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0.308696632431779,0.437119121007915,0,0.245148321753905,0.235676547101626,0.196308467114945,0,0,0.169927114687817,0.281951753939561,0.322289439867886,0.299823467774787,0,0,0,0,0,0.716697915757256,0.157771562193185,0.0679914901909147,0,0.5290268405154,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0.320568492303233 | |phase1_expression=0.181678379270557,0.856402095563933,0.140954404095971,1.0007329835313,0,0,0,0,0.783556884599516,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,1.56740831967947,0.971680998056939,2.06060454107349,0.436194716338694,0,0,0,0.411167888021826,0,0,1.0246428261164,0.236482229888585,0.344745680736619,0,0,0.376484679085209,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0.598390972864896,0.426224750532694,0.580418477257168,0,0,0.502497330513487,0.521482918420201,0.65156653411535,0,0,0,0.845021145247767,0.425208599930087,0,0,0.600707571366025,0,0.285012743741249,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0,0,0,0,0,0.786021525498329,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0,0,0.164437904603676,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.886917589850256,0.087834785693126,0.0654895377488563,0,0,14.9291801081154,14.6268979331384,19.4118622357543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0,0.860509862246441,0,0.560677600142307,0,0,0,0,0.653847612453835,0.302714855289863,0.576175924479999,0,0.624320153660641,0,0,0,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.358779271377724,0,0.211931901159562,0,0.103052529238439,0,0.37223371266318,0,0.292311015483596,0.504867548488229,0.0920498986422993,0,0,0,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,0.236613600079688,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0,0,1.4763109092493,0,0,0,1.26755034821831,0,0,0,0.368965315629341,0.171567810298526,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.433099343283221,0,0,0,0,3.20082107913617,3.04205544681009,2.37809859661965,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.190493682876507,0.763976851116555,1.17217447210047,0,0.205654985406647,0.300343057843917,0.571652865261156,0,0,0.1466765716419,0,0,0,0,1.04007436911366,0,0,0,0.285955987316295,1.08524321078289,0,0,0,0,0,0,0,13.378615870531,6.52934218861764,14.7583757638122,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.207970861530807,0.356857977594324,0,0.117141414992713,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0.215714200818617,0,0,0,0,0.248107807818777,0,0.561320188866147,0,0,0.160853921143607,0,0,0.177561725313127,0.164254312027618,0.519254429183621,0.116210378459959,0,0,0,0.114814448164607,0.728364672026868,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0.462145851343933,0.15350367472613,0,0.107420244868274,0.290033387828457,0.511359764496605,0,0.165284915360978,0.192190067365106,0,0,0,0.94443704049192,0,0,0,0,0,0.286249773483982,0,0.316379424718726,0.190630193923825,0,0,0.318203247925937,0,0.179872457583315,0.823611089208164,0.471249609382746,0,0,0.421258456238981,0,0.731140468893853,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0.6196469961995,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0.540031437238115,0.79312517629427,0,0,0.245040215981032,0,0,0,0.159426272728822,0,0,0.423347165447766,0,0.561594356226918,0.228234679033192,0,0,0,0,0,0,1.03051603426729,0.614481528616916,0,0,0.19538809540204,0,0,0.270455678475983,0.33307196799782,0,0.18714054040822,0.586032717087576,0,0.111443384277478,0,0,0,0,0,0,0,0,0.63337622438398,0,0,0,0.102268682502155,0,0,0,0,0,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0,0.341380344856499,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0,0.227884111694002,0,0,0,0.31900115973192,0,0,0,0,0.166211681900156,0,0,0,0,0,0.632994193584081,0,0.141353071433941,0,0,0.265372693510018,0.611030144933625,0,0,0.104421949505455,0.269604531922708,0,0,0,0,0.728341138602278,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0.520679215005393,0,0,0.17472666824203,0.171986032471617,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,0.195551382734803,0.160317640503067,0,0.19980960958213,0,0.114536596165916,0,0.14405479798815,0,0.235694034616795,0,0.104602846312333,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0.164831716762333,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0.335434687599266,0.0788057072991982,0,0.105600336519406,0.35857467866569,0.191915197319445,0,0,0,0.542999601753713,6.04955043840887,0.653174720218818,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,1.24271716604159,0,0,0.243585196761792,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0,0.285465333544967,0,0.936669811613763,0,0,0.233713309847224,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0.159296767163702,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0.796191777397232,0.400027764663154,0,0.336749488765919,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,1.01365464391844,0,0,0.303859956177382,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0.172214979660816,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0.205116364240755,0.252071696221718,0,0.322951291263702,0,0.0981477185010256,0,0.733714394086716,0.115525666150338,0.762764190934334,0,0,0,0,0,0,0.327543835020193,0,0,0.781078098613847,0.206686796501184,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0.230467975111559,0,0.339848664884159,0,0,0.111231401892069,0,0,0,0.913158720509496,0,0.47775168788705,0,0,0.116241425368125,0,0,0,0,0,0,0,0.170426809518315,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0.308696632431779,0.437119121007915,0,0.245148321753905,0.235676547101626,0.196308467114945,0,0,0.169927114687817,0.281951753939561,0.322289439867886,0.299823467774787,0,0,0,0,0,0.716697915757256,0.157771562193185,0.0679914901909147,0,0.5290268405154,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0.320568492303233 | ||
|short_description=p9@LIPA | |||
}} | }} |
Latest revision as of 21:34, 19 September 2015
Short description: | p9@LIPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LIPA_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | -31bp_to_ENST00000540050_5end |
EntrezGene: | LIPA |
HGNC: | 6617 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 9.26e-53 | 6 |
monopoietic cell | 3.22e-19 | 59 |
monocyte | 3.22e-19 | 59 |
monoblast | 3.22e-19 | 59 |
promonocyte | 3.22e-19 | 59 |
macrophage dendritic cell progenitor | 1.56e-18 | 61 |
myeloid lineage restricted progenitor cell | 5.29e-17 | 66 |
granulocyte monocyte progenitor cell | 1.01e-16 | 67 |
myeloid leukocyte | 1.93e-15 | 72 |
immature conventional dendritic cell | 3.17e-14 | 5 |
common dendritic progenitor | 3.17e-14 | 5 |
adult endothelial progenitor cell | 1.41e-12 | 3 |
myeloid cell | 1.90e-11 | 108 |
common myeloid progenitor | 1.90e-11 | 108 |
conventional dendritic cell | 1.18e-09 | 8 |
nongranular leukocyte | 5.69e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.62e-08 | 120 |
defensive cell | 2.95e-08 | 48 |
phagocyte | 2.95e-08 | 48 |
dendritic cell | 5.53e-08 | 10 |
leukocyte | 2.75e-07 | 136 |
hematopoietic oligopotent progenitor cell | 5.65e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.65e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.55e-14 | 76 |
bone element | 2.44e-13 | 82 |
hematopoietic system | 7.11e-13 | 98 |
blood island | 7.11e-13 | 98 |
skeletal element | 5.45e-12 | 90 |
immune system | 1.53e-11 | 93 |
hemolymphoid system | 1.73e-11 | 108 |
skeletal system | 1.33e-10 | 100 |
lower lobe of right lung | 6.33e-10 | 1 |
right lung lobe | 6.33e-10 | 1 |
lower lobe of lung | 6.33e-10 | 1 |
lobe of lung | 6.33e-10 | 1 |
right lung | 6.33e-10 | 1 |
lateral plate mesoderm | 2.92e-08 | 203 |