FFCP PHASE1:Hg19::chr17:37793357..37793374,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10948 | |EntrezGene=10948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17579 | |HGNC=17579 | ||
|TSSclassifier=strong | |||
|UniProt=F5H0G2,B4DUY1,A8MXA4,Q14849 | |UniProt=F5H0G2,B4DUY1,A8MXA4,Q14849 | ||
|association_with_transcript=24bp_to_ENST00000544210,NM_001165937,NM_001165938,NM_006804_5end | |association_with_transcript=24bp_to_ENST00000544210,NM_001165937,NM_001165938,NM_006804_5end | ||
|cluster_id=chr17:37793357..37793374,+ | |||
|description=CAGE_peak_2_at_STARD3_5end | |description=CAGE_peak_2_at_STARD3_5end | ||
|id=chr17:37793357..37793374,+ | |id=chr17:37793357..37793374,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!8.05e-09!143;DOID:305!2.65e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,7.86e-09,143;DOID:305,2.54e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0002780!2.05e-08!41;UBERON:0001890!2.05e-08!41;UBERON:0006240!2.05e-08!41;UBERON:0001049!3.91e-08!57;UBERON:0005068!3.91e-08!57;UBERON:0006241!3.91e-08!57;UBERON:0007135!3.91e-08!57;UBERON:0003080!1.23e-07!42;UBERON:0002346!1.28e-07!90;UBERON:0000062!1.35e-07!511;UBERON:0003075!4.17e-07!86;UBERON:0007284!4.17e-07!86;UBERON:0000073!5.99e-07!94;UBERON:0001016!5.99e-07!94;UBERON:0001017!9.40e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.98e-09,56;UBERON:0005068,7.98e-09,56;UBERON:0006241,7.98e-09,56;UBERON:0007135,7.98e-09,56;UBERON:0002780,2.01e-08,41;UBERON:0001890,2.01e-08,41;UBERON:0003080,2.01e-08,41;UBERON:0006240,2.01e-08,41;UBERON:0000073,2.55e-08,53;UBERON:0002616,2.55e-08,53;UBERON:0002346,4.35e-08,86;UBERON:0003075,1.45e-07,82;UBERON:0007284,1.45e-07,82;UBERON:0001016,2.04e-07,89;UBERON:0001017,3.25e-07,81;UBERON:0003056,4.92e-07,61;UBERON:0000955,5.73e-07,68;UBERON:0006238,5.73e-07,68 | |||
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| ||
|short_description=p2@STARD3 | |short_description=p2@STARD3 | ||
}} | }} |
Latest revision as of 22:00, 19 September 2015
Short description: | p2@STARD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_STARD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000544210, NM_001165937, NM_001165938, NM_006804_5end |
EntrezGene: | STARD3 |
HGNC: | 17579 |
UniProt: | F5H0G2B4DUY1A8MXA4Q14849 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 7.98e-09 | 56 |
neural rod | 7.98e-09 | 56 |
future spinal cord | 7.98e-09 | 56 |
neural keel | 7.98e-09 | 56 |
regional part of forebrain | 2.01e-08 | 41 |
forebrain | 2.01e-08 | 41 |
anterior neural tube | 2.01e-08 | 41 |
future forebrain | 2.01e-08 | 41 |
regional part of nervous system | 2.55e-08 | 53 |
regional part of brain | 2.55e-08 | 53 |
neurectoderm | 4.35e-08 | 86 |
neural plate | 1.45e-07 | 82 |
presumptive neural plate | 1.45e-07 | 82 |
nervous system | 2.04e-07 | 89 |
central nervous system | 3.25e-07 | 81 |
pre-chordal neural plate | 4.92e-07 | 61 |
brain | 5.73e-07 | 68 |
future brain | 5.73e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 7.86e-09 | 143 |
carcinoma | 2.54e-07 | 106 |