FFCP PHASE1:Hg19::chr10:91087766..91087777,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3437 | |EntrezGene=3437 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5411 | |HGNC=5411 | ||
|TSSclassifier=strong | |||
|UniProt=O14879 | |UniProt=O14879 | ||
|association_with_transcript=115bp_to_ENST00000371818_5end | |association_with_transcript=115bp_to_ENST00000371818_5end | ||
|cluster_id=chr10:91087766..91087777,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_IFIT3_5end | |description=CAGE_peak_3_at_IFIT3_5end | ||
|id=chr10:91087766..91087777,+ | |id=chr10:91087766..91087777,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.11e-25!76;CL:0000839!1.64e-21!70;CL:0000860!3.72e-21!45;CL:0002057!6.44e-21!42;CL:0000557!7.16e-21!71;CL:0002194!5.68e-20!63;CL:0000576!5.68e-20!63;CL:0000040!5.68e-20!63;CL:0000559!5.68e-20!63;CL:0002009!1.13e-19!65;CL:0000763!2.41e-13!112;CL:0000049!2.41e-13!112;CL:0000738!3.28e-11!140;CL:0002031!6.53e-10!124;CL:0002087!1.17e-08!119;CL:0002032!4.68e-07!165;CL:0000837!4.68e-07!165 | |ontology_enrichment_celltype=CL:0000766!1.11e-25!76;CL:0000839!1.64e-21!70;CL:0000860!3.72e-21!45;CL:0002057!6.44e-21!42;CL:0000557!7.16e-21!71;CL:0002194!5.68e-20!63;CL:0000576!5.68e-20!63;CL:0000040!5.68e-20!63;CL:0000559!5.68e-20!63;CL:0002009!1.13e-19!65;CL:0000763!2.41e-13!112;CL:0000049!2.41e-13!112;CL:0000738!3.28e-11!140;CL:0002031!6.53e-10!124;CL:0002087!1.17e-08!119;CL:0002032!4.68e-07!165;CL:0000837!4.68e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000473;7.64e-26;39!CL:0000234;7.64e-26;39!CL:0000860;7.84e-25;33!CL:0002057;7.84e-25;33!CL:0000576;1.02e-17;48!CL:0000766;1.19e-16;69!CL:0000763;6.37e-09;100!CL:0000235;4.78e-07;6!CL:0000775;8.12e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.11e-41,48;CL:0000234,7.11e-41,48;CL:0000766,5.91e-38,72;CL:0000860,2.68e-35,42;CL:0002057,2.68e-35,42;CL:0002194,2.65e-32,59;CL:0000576,2.65e-32,59;CL:0000040,2.65e-32,59;CL:0000559,2.65e-32,59;CL:0000839,2.16e-31,66;CL:0002009,6.90e-31,61;CL:0000557,9.44e-31,67;CL:0000763,3.29e-22,108;CL:0000049,3.29e-22,108;CL:0000738,5.28e-17,136;CL:0002031,3.94e-15,120;CL:0002087,2.84e-14,115;CL:0002032,3.52e-13,161;CL:0000837,3.52e-13,161;CL:0000037,4.13e-12,168;CL:0000988,7.14e-11,177;CL:0002393,6.51e-09,9;CL:0002397,6.51e-09,9;CL:0000235,6.86e-07,6;CL:0000775,7.00e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.51e-24;42!CL:0000049;1.05e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.86e-23!102;UBERON:0003061!1.86e-23!102;UBERON:0002193!4.80e-21!112;UBERON:0002371!1.68e-20!80;UBERON:0001474!2.99e-19!86;UBERON:0004765!6.00e-18!101;UBERON:0001434!6.00e-18!101;UBERON:0002405!3.97e-12!115;UBERON:0002204!2.82e-09!167;UBERON:0001737!3.50e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.72e-15;9!UBERON:0001557;3.72e-15;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.39e-33,98;UBERON:0003061,5.39e-33,98;UBERON:0002371,9.10e-31,76;UBERON:0002193,1.37e-28,108;UBERON:0001474,1.29e-27,82;UBERON:0004765,2.02e-25,90;UBERON:0002405,6.53e-23,93;UBERON:0001434,7.89e-23,100;UBERON:0001737,1.82e-15,9;UBERON:0002204,1.31e-12,167;UBERON:0003081,2.30e-12,203 | |||
|phase1_expression=0.54503513781167,0,0.422863212287913,0,0,0,0,0.631719873426831,0,0,0,0,0,0.247532705920093,0,4.70627602516243,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.157421562627358,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0.154934401160603,0,0,1.66198622559563,0,0,0.447830948479849,0.647787332037959,0.515151135268373,0.726991193897824,0.755751887377619,0.242584061187816,0.697287110717054,0.411167888021826,0.309706370895104,26.75539248596,22.0298207615027,30.7426898855161,7.92915065694223,0.645484683583826,2.70852973188684,0.752969358170419,0,1.12361742222542,67.3384563215986,30.1673285451528,24.2948107803636,32.9851300186716,32.9115035075693,20.4587880255693,121.597670985377,22.6954089876456,33.0095791967655,18.8436498942557,13.5585558789252,23.0220175387424,173.144257753143,92.4376866328787,149.686709259538,1.90129757680748,1.70083439972035,1.46761051855863,1.23561494261145,0.600707571366025,1.12507910687956,1.71007646244749,2.18808344918999,2.19196984517561,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.512365278902701,0.260118695119756,0,0,0,0,0,0,0,0.383220493601921,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0.821127996921047,0.201606743224732,0,0,0,0.670700859703636,0.383587685530591,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.589405839739707,0,0,1.29818957461873,0.522389211897802,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0.71153252537342,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,15.8136500923276,27.1446184903828,0,0.496971951695318,0.379891534993739,0.662045904066094,0,0.354668382198357,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0.576175924479999,0.234321431833797,0,0,0.298897361103602,0,0,0.140450806702248,0.408308342509787,0.122834317311768,0.413303124703062,4.75201142912821,0.989067717114227,0,0,0,0.125118519871964,0.554128230968366,0,0,1.05166641234618,0.226864366320042,0,0.427114777637135,0.211931901159562,0,0,0,0.18611685633159,0.337552664482532,0,0,0,0.161646056818812,0,0,0,0.773043412653187,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,0,0,2.36613600079688,2.52877035117153,1.68707720918437,2.75734931830985,2.39667388501647,2.37270619111097,3.64044532032444,2.35465758150415,1.53898862778556,0,0,0,0,0,0,0,0,0.368965315629341,0.171567810298526,0,0,0.301586917234893,0,0,0,0,0,0,0.433099343283221,0,0,0,0,1.23108503043699,1.8720341211139,1.0404181360211,0,0.671928512795438,1.13420077793909,0,0,0,0.492663237895943,6.77972941901841,0.621984346622316,1.15295962733569,0.37872730027914,0.888970520090367,0.763976851116555,0,0,0,0.901029173531752,2.28661146104463,0,0,0.4400297149257,0.129271715757778,0,0,1.06375246633948,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0.301439377059586,0,0.099972991182057,7.29742683847143,1.00451418286425,0,0.239624855491583,0,0,0.723906533337896,0.410952645100767,0,0,0,0,0.385029108839245,1.01637849688985,0,0,0.167516265334349,0,10.4860983352606,2.99161459204025,18.2342825911856,0.12269149171914,0.500170521059677,0,0,0.356857977594324,0.315404830067869,0,0.300946099727719,0,2.0694614258501,0,0,0.60818530127658,0,0,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,1.28139149255701,0.511707249066704,0,0,0,0.177561725313127,0.492762936082855,0,0.116210378459959,0,0,0,0.114814448164607,0.364182336013434,0.131124414959424,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0.657779629937804,0,0.512900250232778,0.328014645699706,0,1.75169719801128,0.27470839445503,0.495056999523528,0.574265537996172,0,0,0,0,0,0,0.214840489736547,0.435050081742686,0.0852266274161009,0,0.165284915360978,0,0,0,0,0,0,8.93297382510658,0,0,0,0,1.116475108079,0.949138274156178,0.38126038784765,0,0,0,0,0.539617372749944,0,0.235624804691373,0.404364963146632,0,0,0,12.9168149504581,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0.354761064070598,0.844430541190656,0,0,0,0,0,0,1.12972560932135,0,0,0,0.459446800413919,0,1.52927441428475,3.41788312304498,3.81170840732462,4.11362273086194,1.29694662238543,1.08006287447623,3.96562588147135,0,0,0,0,0,0,0,0,0.191505370132367,0.423347165447766,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0,1.46508179271894,0,0,0,0.71623345421307,0,0,0,0.422008249231538,0.333926115068718,0.16480387422676,0.844501632511974,0,0.828851746593443,0,0.715880777515084,0.246169610922139,0,1.16828856491525,1.25314822272926,0,0.295930216910801,9.57932369387759,1.11136990144637,0,0.371072392647405,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0.885741385813839,0.482385754501632,0,0.552896299656123,0,0.438770794307945,0.10893846351899,0,0.307801034015188,0,0,0,0,3.19001159731919,0.366390373607449,1.5991043280559,0,0,0,0,0,0,0,0.476809736941136,0,0,0,0,0,0.442287822516696,0,0.296521128680622,0,0,0.202203398942031,0.802577647298789,0.937057782901357,0,0.391329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| ||
|short_description=p3@IFIT3 | |short_description=p3@IFIT3 | ||
}} | }} |
Latest revision as of 22:15, 19 September 2015
Short description: | p3@IFIT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IFIT3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 115bp_to_ENST00000371818_5end |
EntrezGene: | IFIT3 |
HGNC: | 5411 |
UniProt: | O14879 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.11e-41 | 48 |
phagocyte | 7.11e-41 | 48 |
myeloid leukocyte | 5.91e-38 | 72 |
classical monocyte | 2.68e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.68e-35 | 42 |
monopoietic cell | 2.65e-32 | 59 |
monocyte | 2.65e-32 | 59 |
monoblast | 2.65e-32 | 59 |
promonocyte | 2.65e-32 | 59 |
myeloid lineage restricted progenitor cell | 2.16e-31 | 66 |
macrophage dendritic cell progenitor | 6.90e-31 | 61 |
granulocyte monocyte progenitor cell | 9.44e-31 | 67 |
myeloid cell | 3.29e-22 | 108 |
common myeloid progenitor | 3.29e-22 | 108 |
leukocyte | 5.28e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 3.94e-15 | 120 |
nongranular leukocyte | 2.84e-14 | 115 |
hematopoietic oligopotent progenitor cell | 3.52e-13 | 161 |
hematopoietic multipotent progenitor cell | 3.52e-13 | 161 |
hematopoietic stem cell | 4.13e-12 | 168 |
hematopoietic cell | 7.14e-11 | 177 |
intermediate monocyte | 6.51e-09 | 9 |
CD14-positive, CD16-positive monocyte | 6.51e-09 | 9 |
macrophage | 6.86e-07 | 6 |
neutrophil | 7.00e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.39e-33 | 98 |
blood island | 5.39e-33 | 98 |
bone marrow | 9.10e-31 | 76 |
hemolymphoid system | 1.37e-28 | 108 |
bone element | 1.29e-27 | 82 |
skeletal element | 2.02e-25 | 90 |
immune system | 6.53e-23 | 93 |
skeletal system | 7.89e-23 | 100 |
larynx | 1.82e-15 | 9 |
musculoskeletal system | 1.31e-12 | 167 |
lateral plate mesoderm | 2.30e-12 | 203 |