FFCP PHASE1:Hg19::chr4:10023114..10023128,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56606 | |EntrezGene=56606 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13446 | |HGNC=13446 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NRM0 | |UniProt=Q9NRM0 | ||
|association_with_transcript=0bp_to_NM_020041,uc003gmc.2_5end | |association_with_transcript=0bp_to_NM_020041,uc003gmc.2_5end | ||
|cluster_id=chr4:10023114..10023128,- | |||
|coexpression_cluster_id=C4354 | |coexpression_cluster_id=C4354 | ||
|description=CAGE_peak_1_at_SLC2A9_5end | |description=CAGE_peak_1_at_SLC2A9_5end | ||
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|ontology_enrichment_celltype=CL:0002194!2.57e-22!63;CL:0000576!2.57e-22!63;CL:0000040!2.57e-22!63;CL:0000559!2.57e-22!63;CL:0002009!1.09e-20!65;CL:0000557!7.49e-19!71;CL:0000839!2.37e-18!70;CL:0000766!1.13e-17!76;CL:0002057!1.96e-17!42;CL:0000860!7.70e-15!45;CL:0000763!3.71e-14!112;CL:0000049!3.71e-14!112;CL:0002076!4.57e-08!43;CL:0000223!7.60e-08!59 | |ontology_enrichment_celltype=CL:0002194!2.57e-22!63;CL:0000576!2.57e-22!63;CL:0000040!2.57e-22!63;CL:0000559!2.57e-22!63;CL:0002009!1.09e-20!65;CL:0000557!7.49e-19!71;CL:0000839!2.37e-18!70;CL:0000766!1.13e-17!76;CL:0002057!1.96e-17!42;CL:0000860!7.70e-15!45;CL:0000763!3.71e-14!112;CL:0000049!3.71e-14!112;CL:0002076!4.57e-08!43;CL:0000223!7.60e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.79e-22;39!CL:0000234;2.79e-22;39!CL:0000860;7.65e-21;33!CL:0002057;7.65e-21;33!CL:0000576;3.49e-19;48!CL:0000766;1.47e-12;69!CL:0002076;7.84e-09;42!CL:0000763;2.11e-08;100!CL:0002368;4.99e-08;13!CL:0000235;3.50e-07;6 | |ontology_enrichment_celltype_v019=CL:0000473;2.79e-22;39!CL:0000234;2.79e-22;39!CL:0000860;7.65e-21;33!CL:0002057;7.65e-21;33!CL:0000576;3.49e-19;48!CL:0000766;1.47e-12;69!CL:0002076;7.84e-09;42!CL:0000763;2.11e-08;100!CL:0002368;4.99e-08;13!CL:0000235;3.50e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.97e-35,59;CL:0000576,4.97e-35,59;CL:0000040,4.97e-35,59;CL:0000559,4.97e-35,59;CL:0002009,3.48e-33,61;CL:0000557,7.81e-30,67;CL:0000473,3.38e-29,48;CL:0000234,3.38e-29,48;CL:0000839,4.40e-29,66;CL:0000766,7.76e-29,72;CL:0000860,1.06e-23,42;CL:0002057,1.06e-23,42;CL:0000763,3.40e-23,108;CL:0000049,3.40e-23,108;CL:0000223,5.96e-12,58;CL:0002087,9.04e-12,115;CL:0002076,6.74e-11,42;CL:0000037,2.08e-10,168;CL:0000738,2.17e-09,136;CL:0002032,2.97e-09,161;CL:0000837,2.97e-09,161;CL:0000988,3.37e-09,177;CL:0002031,8.66e-09,120;CL:0002368,5.09e-08,13;CL:0000235,3.45e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.52e-17;42!CL:0000049;5.68e-08;108!CL:0000223;3.81e-07;58 | |ontology_enrichment_development_v019=CL:0002057;1.52e-17;42!CL:0000049;5.68e-08;108!CL:0000223;3.81e-07;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.31e-15!102;UBERON:0003061!1.31e-15!102;UBERON:0002371!2.08e-15!80;UBERON:0002405!3.42e-15!115;UBERON:0002193!6.88e-14!112;UBERON:0001474!2.20e-12!86;UBERON:0004765!5.33e-12!101;UBERON:0001434!5.33e-12!101;UBERON:0002204!1.58e-11!167;UBERON:0000467!9.74e-10!625;UBERON:0000480!1.47e-09!626;UBERON:0000468!2.51e-08!659;UBERON:0002050!2.90e-08!605;UBERON:0005423!2.90e-08!605;UBERON:0000923!3.35e-08!604;UBERON:0005291!3.35e-08!604;UBERON:0006598!3.35e-08!604;UBERON:0002532!3.35e-08!604;UBERON:0000922!8.09e-08!612;UBERON:0000062!8.91e-08!511;UBERON:0007023!3.40e-07!115;UBERON:0003081!7.91e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!1.31e-15!102;UBERON:0003061!1.31e-15!102;UBERON:0002371!2.08e-15!80;UBERON:0002405!3.42e-15!115;UBERON:0002193!6.88e-14!112;UBERON:0001474!2.20e-12!86;UBERON:0004765!5.33e-12!101;UBERON:0001434!5.33e-12!101;UBERON:0002204!1.58e-11!167;UBERON:0000467!9.74e-10!625;UBERON:0000480!1.47e-09!626;UBERON:0000468!2.51e-08!659;UBERON:0002050!2.90e-08!605;UBERON:0005423!2.90e-08!605;UBERON:0000923!3.35e-08!604;UBERON:0005291!3.35e-08!604;UBERON:0006598!3.35e-08!604;UBERON:0002532!3.35e-08!604;UBERON:0000922!8.09e-08!612;UBERON:0000062!8.91e-08!511;UBERON:0007023!3.40e-07!115;UBERON:0003081!7.91e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0002365;2.30e-07;31!UBERON:0002330;2.30e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0002365;2.30e-07;31!UBERON:0002330;2.30e-07;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.17e-25,76;UBERON:0002390,1.17e-24,98;UBERON:0003061,1.17e-24,98;UBERON:0004765,9.86e-23,90;UBERON:0001474,2.93e-22,82;UBERON:0002193,9.44e-22,108;UBERON:0002405,2.26e-20,93;UBERON:0001434,5.17e-19,100;UBERON:0002204,8.83e-11,167;UBERON:0002050,1.90e-09,564;UBERON:0005423,6.65e-09,581;UBERON:0000923,1.91e-08,560;UBERON:0010316,1.91e-08,560;UBERON:0005291,1.91e-08,560;UBERON:0006598,1.91e-08,560;UBERON:0010317,1.91e-08,560;UBERON:0002532,1.91e-08,560;UBERON:0003081,5.89e-08,203;UBERON:0000922,7.66e-08,592;UBERON:0002365,1.21e-07,31;UBERON:0002330,1.21e-07,31 | |||
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| ||
|short_description=p1@SLC2A9 | |short_description=p1@SLC2A9 | ||
}} | }} |
Latest revision as of 01:13, 20 September 2015
Short description: | p1@SLC2A9 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC2A9_5end |
Coexpression cluster: | C4354_Small_Prostate_Mallassezderived_Urothelial_Sebocyte_Keratinocyte_Macrophage |
Association with transcript: | 0bp_to_NM_020041, uc003gmc.2_5end |
EntrezGene: | SLC2A9 |
HGNC: | 13446 |
UniProt: | Q9NRM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 4.97e-35 | 59 |
monocyte | 4.97e-35 | 59 |
monoblast | 4.97e-35 | 59 |
promonocyte | 4.97e-35 | 59 |
macrophage dendritic cell progenitor | 3.48e-33 | 61 |
granulocyte monocyte progenitor cell | 7.81e-30 | 67 |
defensive cell | 3.38e-29 | 48 |
phagocyte | 3.38e-29 | 48 |
myeloid lineage restricted progenitor cell | 4.40e-29 | 66 |
myeloid leukocyte | 7.76e-29 | 72 |
classical monocyte | 1.06e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.06e-23 | 42 |
myeloid cell | 3.40e-23 | 108 |
common myeloid progenitor | 3.40e-23 | 108 |
endodermal cell | 5.96e-12 | 58 |
nongranular leukocyte | 9.04e-12 | 115 |
endo-epithelial cell | 6.74e-11 | 42 |
hematopoietic stem cell | 2.08e-10 | 168 |
leukocyte | 2.17e-09 | 136 |
hematopoietic oligopotent progenitor cell | 2.97e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.97e-09 | 161 |
hematopoietic cell | 3.37e-09 | 177 |
hematopoietic lineage restricted progenitor cell | 8.66e-09 | 120 |
respiratory epithelial cell | 5.09e-08 | 13 |
macrophage | 3.45e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.17e-25 | 76 |
hematopoietic system | 1.17e-24 | 98 |
blood island | 1.17e-24 | 98 |
skeletal element | 9.86e-23 | 90 |
bone element | 2.93e-22 | 82 |
hemolymphoid system | 9.44e-22 | 108 |
immune system | 2.26e-20 | 93 |
skeletal system | 5.17e-19 | 100 |
musculoskeletal system | 8.83e-11 | 167 |
embryonic structure | 1.90e-09 | 564 |
developing anatomical structure | 6.65e-09 | 581 |
germ layer | 1.91e-08 | 560 |
germ layer / neural crest | 1.91e-08 | 560 |
embryonic tissue | 1.91e-08 | 560 |
presumptive structure | 1.91e-08 | 560 |
germ layer / neural crest derived structure | 1.91e-08 | 560 |
epiblast (generic) | 1.91e-08 | 560 |
lateral plate mesoderm | 5.89e-08 | 203 |
embryo | 7.66e-08 | 592 |
exocrine gland | 1.21e-07 | 31 |
exocrine system | 1.21e-07 | 31 |