FFCP PHASE1:Hg19::chrX:153305962..153305995,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4204 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6990 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-408bp_to_ENST00000481807_5end | |||
|cluster_id=chrX:153305962..153305995,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_5_at_MECP2_5end | |||
|id=chrX:153305962..153305995,- | |||
|ontology_enrichment_celltype=CL:0002057!1.53e-94!42;CL:0000860!1.28e-87!45;CL:0000766!1.28e-66!76;CL:0002194!5.23e-66!63;CL:0000576!5.23e-66!63;CL:0000040!5.23e-66!63;CL:0000559!5.23e-66!63;CL:0002009!1.03e-63!65;CL:0000839!1.52e-58!70;CL:0000557!1.35e-57!71;CL:0000763!4.35e-42!112;CL:0000049!4.35e-42!112;CL:0000738!2.39e-41!140;CL:0002087!6.13e-41!119;CL:0002031!1.11e-34!124;CL:0000037!1.20e-31!172;CL:0000566!1.20e-31!172;CL:0002032!5.56e-30!165;CL:0000837!5.56e-30!165;CL:0000988!2.60e-29!182;CL:0000134!1.41e-12!358;CL:0002320!4.06e-12!365;CL:0000767!6.97e-11!3;CL:0000034!1.42e-10!444;CL:0000219!1.69e-10!390;CL:0000723!2.99e-10!436;CL:0000048!7.13e-10!430;CL:0002393!3.41e-09!9;CL:0002397!3.41e-09!9;CL:0000094!6.00e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.91e-102;33!CL:0002057;2.91e-102;33!CL:0000473;1.36e-70;39!CL:0000234;1.36e-70;39!CL:0000576;2.06e-58;48!CL:0000766;1.13e-39;69!CL:0000767;5.42e-18;3!CL:0000763;4.82e-17;100!CL:0002087;1.91e-15;104!CL:0000094;8.53e-12;8!CL:0000738;2.29e-10;136!CL:0002393;1.25e-09;6!CL:0002397;1.25e-09;6!CL:0000081;1.27e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.60e-109,42;CL:0002057,1.60e-109,42;CL:0000473,3.33e-95,48;CL:0000234,3.33e-95,48;CL:0000766,3.63e-80,72;CL:0002194,3.78e-75,59;CL:0000576,3.78e-75,59;CL:0000040,3.78e-75,59;CL:0000559,3.78e-75,59;CL:0002009,1.46e-72,61;CL:0000839,9.16e-67,66;CL:0000557,1.04e-65,67;CL:0000763,6.18e-52,108;CL:0000049,6.18e-52,108;CL:0000738,4.79e-43,136;CL:0002087,2.97e-39,115;CL:0002031,1.19e-34,120;CL:0000037,7.30e-34,168;CL:0002032,3.60e-33,161;CL:0000837,3.60e-33,161;CL:0000988,7.14e-32,177;CL:0000767,4.53e-18,3;CL:0000134,3.64e-13,354;CL:0002320,8.48e-13,361;CL:0000094,8.29e-12,8;CL:0000219,1.66e-11,386;CL:0000048,6.38e-10,427;CL:0000723,1.06e-09,433;CL:0000034,2.02e-09,441;CL:0000081,1.25e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.30e-78;42!CL:0000049;2.94e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.02e-50!80;UBERON:0001474!1.25e-48!86;UBERON:0002390!4.17e-42!102;UBERON:0003061!4.17e-42!102;UBERON:0004765!4.92e-40!101;UBERON:0001434!4.92e-40!101;UBERON:0002193!1.70e-37!112;UBERON:0002405!4.12e-34!115;UBERON:0002204!3.49e-23!167;UBERON:0003081!6.22e-17!216;UBERON:0002384!1.72e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.99e-57,76;UBERON:0001474,6.67e-53,82;UBERON:0004765,8.51e-48,90;UBERON:0002390,6.69e-47,98;UBERON:0003061,6.69e-47,98;UBERON:0002405,4.18e-46,93;UBERON:0001434,1.50e-42,100;UBERON:0002193,4.10e-42,108;UBERON:0002204,1.79e-23,167;UBERON:0003081,5.40e-20,203;UBERON:0002384,2.68e-12,371;UBERON:0000926,6.07e-11,315;UBERON:0004120,6.07e-11,315;UBERON:0006603,6.07e-11,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,1.91914699048606,1.85779347979291,0,0,0,0,0,0,5.53995408531877,9.42558903109666,5.64228263861215,0,0,0,0.436194716338694,0.377875943688809,0.485168122375632,4.64858073811369,9.04569353648017,12.078548464909,10.3569261235974,7.68482119587302,9.45928919554341,31.0271112662957,35.5016575971104,20.3139729891513,3.38836211176688,2.18324920046277,1.57306439111559,28.7718858828648,27.278967301468,26.2128221577607,0.329851300186716,0.997318288108159,1.70489900213078,24.3775760448011,13.6172453925874,14.9477339758938,6.02996796616184,8.86520961314342,6.08128765174327,13.3187890579341,27.6208226990674,16.456044146926,0,0.212604299965044,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80428461064202,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@MECP2 | |||
}} |
Latest revision as of 01:50, 20 September 2015
Short description: | p5@MECP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MECP2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -408bp_to_ENST00000481807_5end |
EntrezGene: | MECP2 |
HGNC: | 6990 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.60e-109 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.60e-109 | 42 |
defensive cell | 3.33e-95 | 48 |
phagocyte | 3.33e-95 | 48 |
myeloid leukocyte | 3.63e-80 | 72 |
monopoietic cell | 3.78e-75 | 59 |
monocyte | 3.78e-75 | 59 |
monoblast | 3.78e-75 | 59 |
promonocyte | 3.78e-75 | 59 |
macrophage dendritic cell progenitor | 1.46e-72 | 61 |
myeloid lineage restricted progenitor cell | 9.16e-67 | 66 |
granulocyte monocyte progenitor cell | 1.04e-65 | 67 |
myeloid cell | 6.18e-52 | 108 |
common myeloid progenitor | 6.18e-52 | 108 |
leukocyte | 4.79e-43 | 136 |
nongranular leukocyte | 2.97e-39 | 115 |
hematopoietic lineage restricted progenitor cell | 1.19e-34 | 120 |
hematopoietic stem cell | 7.30e-34 | 168 |
hematopoietic oligopotent progenitor cell | 3.60e-33 | 161 |
hematopoietic multipotent progenitor cell | 3.60e-33 | 161 |
hematopoietic cell | 7.14e-32 | 177 |
basophil | 4.53e-18 | 3 |
mesenchymal cell | 3.64e-13 | 354 |
connective tissue cell | 8.48e-13 | 361 |
granulocyte | 8.29e-12 | 8 |
motile cell | 1.66e-11 | 386 |
multi fate stem cell | 6.38e-10 | 427 |
somatic stem cell | 1.06e-09 | 433 |
stem cell | 2.02e-09 | 441 |
blood cell | 1.25e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.99e-57 | 76 |
bone element | 6.67e-53 | 82 |
skeletal element | 8.51e-48 | 90 |
hematopoietic system | 6.69e-47 | 98 |
blood island | 6.69e-47 | 98 |
immune system | 4.18e-46 | 93 |
skeletal system | 1.50e-42 | 100 |
hemolymphoid system | 4.10e-42 | 108 |
musculoskeletal system | 1.79e-23 | 167 |
lateral plate mesoderm | 5.40e-20 | 203 |
connective tissue | 2.68e-12 | 371 |
mesoderm | 6.07e-11 | 315 |
mesoderm-derived structure | 6.07e-11 | 315 |
presumptive mesoderm | 6.07e-11 | 315 |