FFCP PHASE1:Hg19::chr2:216238068..216238142,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:216238068..216238142,-
|short_description=p31@FN1
|description=CAGE_peak_31_at_FN1_5end
|association_with_transcript=0bp_to_AK316350,M14060,M27590_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt=B4DN21,Q14327,Q14328 | |UniProt=B4DN21,Q14327,Q14328 | ||
|association_with_transcript=0bp_to_AK316350,M14060,M27590_5end | |||
|cluster_id=chr2:216238068..216238142,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_31_at_FN1_5end | |||
|id=chr2:216238068..216238142,- | |||
|ontology_enrichment_celltype=CL:0000055!1.10e-37!180;CL:0000057!1.44e-23!75;CL:0000680!7.46e-18!57;CL:0000056!7.46e-18!57;CL:0000355!7.46e-18!57;CL:0000183!7.40e-17!59;CL:0000187!2.58e-16!54;CL:0002371!1.97e-15!591;CL:0000222!1.62e-13!119;CL:0000220!3.30e-13!246;CL:0000393!6.69e-13!60;CL:0000211!6.69e-13!60;CL:0002321!1.09e-12!248;CL:0000144!1.64e-12!625;CL:0000192!6.31e-12!42;CL:0000514!6.31e-12!42;CL:0000359!8.18e-11!32;CL:0002620!5.49e-10!23;CL:0000048!3.62e-08!430;CL:0002494!3.73e-08!16;CL:0000548!7.04e-08!679;CL:0000004!7.04e-08!679;CL:0000255!7.04e-08!679;CL:0000723!1.62e-07!436;CL:0000012!2.16e-07!682;CL:0000034!7.43e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000134;9.19e-12;55!CL:0000359;1.25e-11;32!CL:0002620;2.40e-11;23!CL:0000723;5.25e-11;61!CL:0000057;6.77e-11;73!CL:0000187;1.18e-10;55!CL:0000048;5.44e-10;58!CL:0000192;8.68e-10;43!CL:0002320;2.62e-09;188!CL:0002494;3.59e-09;16!CL:0000349;6.57e-09;19!CL:0000393;5.55e-08;61!CL:0000211;5.55e-08;61!CL:0000034;6.62e-08;69!CL:0002334;1.44e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.83e-26,76;CL:0000680,2.92e-20,58;CL:0000056,2.92e-20,58;CL:0000355,2.92e-20,58;CL:0000048,2.68e-19,427;CL:0000723,1.66e-18,433;CL:0000187,1.69e-18,55;CL:0000034,6.33e-17,441;CL:0000393,8.98e-15,61;CL:0000211,8.98e-15,61;CL:0000192,1.84e-13,43;CL:0000514,1.84e-13,43;CL:0000359,3.40e-12,32;CL:0000222,4.23e-12,121;CL:0002620,3.03e-11,23;CL:0002321,1.95e-10,250;CL:0002494,3.84e-09,16;CL:0000349,8.67e-09,19;CL:0002320,9.37e-08,361;CL:0002334,1.92e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000355;7.32e-11;58!CL:0000514;8.68e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.84e-21!83;UBERON:0002329!3.84e-21!83;UBERON:0003077!3.84e-21!83;UBERON:0003059!3.84e-21!83;UBERON:0007282!3.84e-21!83;UBERON:0009618!3.84e-21!83;UBERON:0007285!3.84e-21!83;UBERON:0005256!3.39e-20!143;UBERON:0004290!1.80e-19!70;UBERON:0000486!7.66e-18!82;UBERON:0001134!1.95e-16!61;UBERON:0002036!1.95e-16!61;UBERON:0003082!1.95e-16!61;UBERON:0004872!2.83e-16!84;UBERON:0003914!3.66e-16!118;UBERON:0002385!9.29e-16!63;UBERON:0001015!9.29e-16!63;UBERON:0000383!9.29e-16!63;UBERON:0000490!1.01e-15!138;UBERON:0002049!1.47e-15!79;UBERON:0007798!1.47e-15!79;UBERON:0002100!1.29e-13!216;UBERON:0001637!2.41e-13!42;UBERON:0003509!2.41e-13!42;UBERON:0004572!2.41e-13!42;UBERON:0000055!9.91e-13!69;UBERON:0004535!1.42e-12!110;UBERON:0001009!1.67e-12!113;UBERON:0001981!2.48e-12!60;UBERON:0007500!2.48e-12!60;UBERON:0004537!2.48e-12!60;UBERON:0006965!2.48e-12!60;UBERON:0004573!1.22e-10!33;UBERON:0004571!1.22e-10!33;UBERON:0003104!1.69e-09!238;UBERON:0009142!1.69e-09!238;UBERON:0000475!2.02e-09!365;UBERON:0003102!2.11e-09!95;UBERON:0002199!2.27e-09!45;UBERON:0002416!2.27e-09!45;UBERON:0000468!2.92e-09!659;UBERON:0000119!1.04e-08!312;UBERON:0002097!1.86e-08!40;UBERON:0000483!2.36e-08!309;UBERON:0000947!9.76e-08!21;UBERON:0010191!9.76e-08!21;UBERON:0000948!2.89e-07!24;UBERON:0005498!2.89e-07!24;UBERON:0004140!2.89e-07!24;UBERON:0009881!2.89e-07!24;UBERON:0004141!2.89e-07!24;UBERON:0003084!2.89e-07!24;UBERON:0007005!2.89e-07!24;UBERON:0004139!2.89e-07!24;UBERON:0004291!2.89e-07!24;UBERON:0004923!4.18e-07!57;UBERON:0000926!5.16e-07!448;UBERON:0004120!5.16e-07!448;UBERON:0006603!5.16e-07!448;UBERON:0007100!6.80e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.02e-10;42!UBERON:0003509;1.02e-10;42!UBERON:0004572;1.02e-10;42!UBERON:0004573;1.12e-10;33!UBERON:0004571;1.12e-10;33!UBERON:0002384;1.80e-08;198!UBERON:0000947;3.56e-08;21!UBERON:0010191;3.56e-08;21!UBERON:0002385;7.80e-08;31!UBERON:0001015;7.80e-08;31!UBERON:0000383;7.80e-08;31!UBERON:0000478;1.08e-07;24!UBERON:0002097;4.19e-07;41!UBERON:0007500;9.75e-07;56!UBERON:0001981;9.75e-07;56!UBERON:0004537;9.75e-07;56 | |||
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|phase1_expression=16.3510541343501,13.7024335290229,13.3906683891173,24.0175916047513,5.36353313312745,38.3828950604162,2.53299878168311,4.42203911398782,0.522371256399677,0.737201809504527,0,5.67947567538448,8.17677632508206,2.59909341216098,5.30235801164665,4.70627602516243,8.43772339233568,8.76372108464848,4.39139518911456,0.738726348460727,1.63200552995402,1.25381888591235,0.572471974262113,0.547497700291537,1.50651167513763,0,0,0,0,0,0.928896739896456,0,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,285.254033587335,6.70700859703636,6.52099065402005,1.44575660953827,9.02408239144601,2.89693037921647,90.6625979638253,254.996672038581,1.22895262313288,5.32150553910154,3.07421749925941,0.261958150995425,0,0,0,0,0,0,0,0,1.19257444420023,6.02164216574287,2.77712401286075,6.78369530308812,3.35599548967925,1.92582629358047,2.29894463190492,1.29208379584664,1.42306505074684,2.34304428935269,0.402829317109147,3.04108842287405,0.488124115096339,0.367663080345869,8.91156142669936,0.357198913136319,0.898117490504679,0.900891843866578,0,2.84779697870439,1.09921046358244,0,0,0.436094052142534,41.2486719907114,12.7896816781226,43.0329837642961,44.1728395953173,9.930714701554,11.2135520028461,23.4847790605351,12.5800449692752,12.7596524513904,8.21735099625097,5.06731899651722,19.827823021486,40.9084906380799,0.234321431833797,10.9256026890612,5.70471821544449,8.66802347200446,3.40560046066918,2.26622122115384,1.96631129383148,2.85815839756851,2.45668634623536,2.37649296704261,2.37600571456411,10.3852110296994,3.64064544775211,3.59309070908119,2.69337782326506,1.7516592782075,1.93944880838928,3.5118209670467,8.27517048657353,10.2161880056486,6.80593098960126,14.1717812194201,7.901623386287,20.3454625113179,15.3046459003045,5.87399416659102,19.0653999633766,7.44467425326359,18.0590675498155,8.28214543870188,20.9520032622615,9.57318945879913,7.92065678412178,13.4903645156313,3.32481924151213,4.23901480776219,3.09217365061275,3.54569956768085,2.58124135850103,0,0,0.69716365721711,0.414644220061482,0.504641701751257,0,10.9514672630871,10.935095949279,4.14404764057442,16.7172454091512,10.8281922250438,0,0,0,0.110293972732394,0,0,0,0,0,0,0,4.5273141246454,5.88034845542168,8.87285243752816,1.96565443335525,2.95394953340702,0,0.614942192715568,1.20097467208968,2.96325770603289,0,0,0,1.3032332212413,1.03993478527958,0,0,16.6720345814867,1.29929802984966,1.85194205030644,1.90254152234598,0,0,0,0,0,0,2.51973192298289,0.567100388969546,3.76145795351963,1.16253575405585,7.66765358330422,0,0,0,0,0,0,0.763976851116555,0,3.4214489204541,1.7480673759565,1.20137223137567,0.571652865261156,2.13049060256185,3.48768055066624,1.6134422880609,7.88557466122444,7.15312891703765,15.215449546008,2.12750493267896,0,4.62973273671856,4.25547396069835,2.93064396917709,2.14466990487221,6.51145926469732,7.40916303102692,6.18898750158097,3.19852753868291,3.16780749173372,1.20575750823834,4.35766729300147,0.299918973546171,1.2162378064119,0,0,7.42837052023906,6.89171615004683,4.27910715122155,12.740754986747,15.2052478687284,7.69962141931551,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,3.55805325985506,6.5022167737758,3.52644530809656,9.77463049194793,12.133171238207,8.2005255817646,16.5169395139726,11.1350056899256,9.09630016223939,5.17365356462525,2.65690239414175,19.5431318654205,3.38846096425523,3.13281851940385,6.51972505240626,0,0,0,1.21251028578504,9.98612637062982,4.5358543999452,30.7653681695283,50.6424511850606,38.169772842898,15.7611153584512,23.0268262080017,21.0718636698126,22.2627099667486,3.54682295746108,7.63515418846446,2.21743321237285,1.03850885836724,2.67283870457906,1.93375119346596,12.6319076291069,0,1.7222167224691,1.27463817604702,2.75361271414791,0,0.539107359730903,0,0,0.527758144464379,1.13733384070897,0.340187410553031,6.47747748306418,4.62681758070868,1.08378575017541,3.51182841698397,0.254876273045038,0,0.895499018888713,0,0,0,0.328014645699706,0.325378394664303,2.06082023295445,0.0915694648183434,0,2.87132768998086,1.30012049207304,6.42735719376638,3.67348729510063,5.08360436478326,7.06116903740196,3.99726060205139,14.3943128123487,12.7614690644521,5.45450415463046,1.95870478422822,9.25595526021477,8.64855303142978,11.4851441245126,10.9250403323994,4.64845549297286,37.7774816196768,2.7881490806424,4.00443654228915,2.12922412126809,1.73986598415015,7.96894142146856,2.00374841438788,5.21021717103534,12.9715564134678,5.71890581771475,1.02359116524534,9.84259672478017,6.0458617105928,8.63443504219153,3.95719406683292,1.37268514868027,1.7671860351853,2.02182481573316,6.34041284692033,4.63384301862879,1.46290121726877,1.70599442741899,4.22600587027022,1.22849920267187,2.12108147930569,16.9512174930364,4.41092274836899,3.98063385144732,2.19225442626881,6.94530641120025,12.462000288886,7.10186319369464,3.40805847909725,3.66204283291914,2.29458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| ||
|short_description=p31@FN1 | |||
}} | }} |
Latest revision as of 02:04, 20 September 2015
Short description: | p31@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 0bp_to_AK316350, M14060, M27590_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | B4DN21Q14327Q14328 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.83e-26 | 76 |
muscle precursor cell | 2.92e-20 | 58 |
myoblast | 2.92e-20 | 58 |
multi-potent skeletal muscle stem cell | 2.92e-20 | 58 |
multi fate stem cell | 2.68e-19 | 427 |
somatic stem cell | 1.66e-18 | 433 |
muscle cell | 1.69e-18 | 55 |
stem cell | 6.33e-17 | 441 |
electrically responsive cell | 8.98e-15 | 61 |
electrically active cell | 8.98e-15 | 61 |
smooth muscle cell | 1.84e-13 | 43 |
smooth muscle myoblast | 1.84e-13 | 43 |
vascular associated smooth muscle cell | 3.40e-12 | 32 |
mesodermal cell | 4.23e-12 | 121 |
skin fibroblast | 3.03e-11 | 23 |
embryonic cell | 1.95e-10 | 250 |
cardiocyte | 3.84e-09 | 16 |
extraembryonic cell | 8.67e-09 | 19 |
connective tissue cell | 9.37e-08 | 361 |
preadipocyte | 1.92e-07 | 12 |