FFCP PHASE1:Hg19::chr2:216241339..216241404,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt=B4DN21 | |UniProt=B4DN21 | ||
|association_with_transcript=-17bp_to_AK297733_5end | |association_with_transcript=-17bp_to_AK297733_5end | ||
|cluster_id=chr2:216241339..216241404,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_7_at_FN1_5end | |description=CAGE_peak_7_at_FN1_5end | ||
|id=chr2:216241339..216241404,- | |id=chr2:216241339..216241404,- | ||
|ontology_enrichment_celltype=CL:0000055!1.18e-37!180;CL:0000057!1.63e-24!75;CL:0000680!1.44e-15!57;CL:0000056!1.44e-15!57;CL:0000355!1.44e-15!57;CL:0000183!3.78e-15!59;CL:0002371!1.82e-14!591;CL:0000187!2.95e-14!54;CL:0000220!5.22e-14!246;CL:0002321!8.52e-14!248;CL:0000222!2.03e-13!119;CL:0000144!1.68e-12!625;CL:0000393!3.02e-12!60;CL:0000211!3.02e-12!60;CL:0000192!5.01e-10!42;CL:0000514!5.01e-10!42;CL:0002620!7.26e-10!23;CL:0000359!3.27e-08!32;CL:0002334!8.24e-08!12;CL:0000548!2.31e-07!679;CL:0000004!2.31e-07!679;CL:0000255!2.31e-07!679;CL:0002494!5.35e-07!16;CL:0000012!7.84e-07!682 | |ontology_enrichment_celltype=CL:0000055!1.18e-37!180;CL:0000057!1.63e-24!75;CL:0000680!1.44e-15!57;CL:0000056!1.44e-15!57;CL:0000355!1.44e-15!57;CL:0000183!3.78e-15!59;CL:0002371!1.82e-14!591;CL:0000187!2.95e-14!54;CL:0000220!5.22e-14!246;CL:0002321!8.52e-14!248;CL:0000222!2.03e-13!119;CL:0000144!1.68e-12!625;CL:0000393!3.02e-12!60;CL:0000211!3.02e-12!60;CL:0000192!5.01e-10!42;CL:0000514!5.01e-10!42;CL:0002620!7.26e-10!23;CL:0000359!3.27e-08!32;CL:0002334!8.24e-08!12;CL:0000548!2.31e-07!679;CL:0000004!2.31e-07!679;CL:0000255!2.31e-07!679;CL:0002494!5.35e-07!16;CL:0000012!7.84e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000134;2.27e-12;55!CL:0000723;5.64e-11;61!CL:0000057;9.74e-11;73!CL:0002620;1.10e-10;23!CL:0000048;4.24e-10;58!CL:0000349;1.85e-09;19!CL:0002320;1.99e-09;188!CL:0000187;2.26e-09;55!CL:0000359;1.38e-08;32!CL:0000034;1.79e-08;69!CL:0002334;1.93e-08;12!CL:0000192;2.31e-08;43!CL:0002494;1.54e-07;16!CL:0000393;4.62e-07;61!CL:0000211;4.62e-07;61!CL:0000499;5.28e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.18e-27,76;CL:0000680,1.77e-17,58;CL:0000056,1.77e-17,58;CL:0000355,1.77e-17,58;CL:0000187,5.01e-16,55;CL:0000048,4.50e-14,427;CL:0000723,9.08e-14,433;CL:0000034,5.58e-13,441;CL:0000393,1.97e-12,61;CL:0000211,1.97e-12,61;CL:0000222,2.93e-12,121;CL:0000192,2.43e-11,43;CL:0000514,2.43e-11,43;CL:0002321,6.70e-11,250;CL:0002620,1.03e-10,23;CL:0000349,1.98e-09,19;CL:0000359,6.83e-09,32;CL:0002334,1.89e-08,12;CL:0002494,1.48e-07,16;CL:0000499,4.69e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000355;1.23e-09;58!CL:0000514;2.31e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!5.09e-20!143;UBERON:0000914!1.32e-18!83;UBERON:0002329!1.32e-18!83;UBERON:0003077!1.32e-18!83;UBERON:0003059!1.32e-18!83;UBERON:0007282!1.32e-18!83;UBERON:0009618!1.32e-18!83;UBERON:0007285!1.32e-18!83;UBERON:0004290!5.17e-17!70;UBERON:0000486!8.09e-16!82;UBERON:0003914!1.90e-15!118;UBERON:0000490!3.29e-15!138;UBERON:0004872!6.07e-15!84;UBERON:0002100!1.69e-14!216;UBERON:0001134!1.85e-14!61;UBERON:0002036!1.85e-14!61;UBERON:0003082!1.85e-14!61;UBERON:0002385!2.71e-14!63;UBERON:0001015!2.71e-14!63;UBERON:0000383!2.71e-14!63;UBERON:0002049!9.32e-13!79;UBERON:0007798!9.32e-13!79;UBERON:0000468!3.84e-12!659;UBERON:0000475!3.47e-11!365;UBERON:0002199!2.30e-10!45;UBERON:0002416!2.30e-10!45;UBERON:0004535!2.56e-10!110;UBERON:0001009!3.38e-10!113;UBERON:0001637!4.17e-10!42;UBERON:0003509!4.17e-10!42;UBERON:0004572!4.17e-10!42;UBERON:0000055!4.22e-10!69;UBERON:0001981!8.03e-10!60;UBERON:0007500!8.03e-10!60;UBERON:0004537!8.03e-10!60;UBERON:0006965!8.03e-10!60;UBERON:0000119!9.54e-10!312;UBERON:0003102!1.09e-09!95;UBERON:0000483!2.27e-09!309;UBERON:0003104!2.64e-09!238;UBERON:0009142!2.64e-09!238;UBERON:0002097!1.04e-08!40;UBERON:0004573!5.52e-08!33;UBERON:0004571!5.52e-08!33;UBERON:0000481!5.59e-08!347;UBERON:0000467!8.62e-08!625;UBERON:0004923!8.86e-08!57;UBERON:0000480!1.30e-07!626;UBERON:0001013!8.91e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;9.67e-09;198!UBERON:0001637;1.48e-07;42!UBERON:0003509;1.48e-07;42!UBERON:0004572;1.48e-07;42!UBERON:0000478;1.94e-07;24!UBERON:0004573;2.11e-07;33!UBERON:0004571;2.11e-07;33!UBERON:0002199;2.59e-07;46!UBERON:0002416;2.59e-07;46!UBERON:0002097;2.83e-07;41!UBERON:0002385;2.96e-07;31!UBERON:0001015;2.96e-07;31!UBERON:0000383;2.96e-07;31 | |||
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| ||
|short_description=p7@FN1 | |short_description=p7@FN1 | ||
}} | }} |
Latest revision as of 02:14, 20 September 2015
Short description: | p7@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | -17bp_to_AK297733_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | B4DN21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.18e-27 | 76 |
muscle precursor cell | 1.77e-17 | 58 |
myoblast | 1.77e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.77e-17 | 58 |
muscle cell | 5.01e-16 | 55 |
multi fate stem cell | 4.50e-14 | 427 |
somatic stem cell | 9.08e-14 | 433 |
stem cell | 5.58e-13 | 441 |
electrically responsive cell | 1.97e-12 | 61 |
electrically active cell | 1.97e-12 | 61 |
mesodermal cell | 2.93e-12 | 121 |
smooth muscle cell | 2.43e-11 | 43 |
smooth muscle myoblast | 2.43e-11 | 43 |
embryonic cell | 6.70e-11 | 250 |
skin fibroblast | 1.03e-10 | 23 |
extraembryonic cell | 1.98e-09 | 19 |
vascular associated smooth muscle cell | 6.83e-09 | 32 |
preadipocyte | 1.89e-08 | 12 |
cardiocyte | 1.48e-07 | 16 |
stromal cell | 4.69e-07 | 28 |