FFCP PHASE1:Hg19::chr2:216245657..216245732,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:216245657..216245732,- to FFCP PHASE1:Hg19::chr2:216245657..216245732,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=319bp_to_ENST00000474036_5end | |||
|cluster_id=chr2:216245657..216245732,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_18_at_FN1_5end | |||
|id=chr2:216245657..216245732,- | |||
|ontology_enrichment_celltype=CL:0000055!8.49e-41!180;CL:0000057!8.34e-25!75;CL:0002371!6.10e-18!591;CL:0000680!6.05e-17!57;CL:0000056!6.05e-17!57;CL:0000355!6.05e-17!57;CL:0000144!1.13e-16!625;CL:0000183!1.92e-16!59;CL:0000220!8.17e-16!246;CL:0000187!9.01e-16!54;CL:0002321!1.11e-15!248;CL:0000222!7.21e-15!119;CL:0000393!2.28e-14!60;CL:0000211!2.28e-14!60;CL:0000548!5.10e-12!679;CL:0000004!5.10e-12!679;CL:0000255!5.10e-12!679;CL:0000012!2.29e-11!682;CL:0000192!1.17e-10!42;CL:0000514!1.17e-10!42;CL:0002620!1.32e-10!23;CL:0000359!5.29e-09!32;CL:0002494!5.07e-08!16;CL:0002334!1.69e-07!12;CL:0000048!2.92e-07!430;CL:0000723!6.37e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000134;7.14e-13;55!CL:0000723;1.09e-11;61!CL:0002620;1.20e-11;23!CL:0000057;2.79e-11;73!CL:0000048;1.25e-10;58!CL:0000187;1.52e-10;55!CL:0000349;8.47e-10;19!CL:0002320;1.54e-09;188!CL:0000359;2.56e-09;32!CL:0000034;5.08e-09;69!CL:0002494;8.36e-09;16!CL:0000192;9.37e-09;43!CL:0002334;3.52e-08;12!CL:0000393;7.00e-08;61!CL:0000211;7.00e-08;61!CL:0000499;3.33e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.05e-28,76;CL:0000680,2.89e-19,58;CL:0000056,2.89e-19,58;CL:0000355,2.89e-19,58;CL:0000187,5.99e-18,55;CL:0000048,2.68e-15,427;CL:0000723,1.69e-14,433;CL:0000222,3.40e-14,121;CL:0000393,3.95e-14,61;CL:0000211,3.95e-14,61;CL:0000034,6.81e-14,441;CL:0002321,8.09e-13,250;CL:0000192,3.31e-12,43;CL:0000514,3.31e-12,43;CL:0002620,1.15e-11,23;CL:0000359,7.11e-10,32;CL:0000349,7.68e-10,19;CL:0002494,8.86e-09,16;CL:0002334,3.38e-08,12;CL:0000499,3.01e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000355;1.62e-10;58!CL:0000514;9.37e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.02e-19!143;UBERON:0000914!1.23e-19!83;UBERON:0002329!1.23e-19!83;UBERON:0003077!1.23e-19!83;UBERON:0003059!1.23e-19!83;UBERON:0007282!1.23e-19!83;UBERON:0009618!1.23e-19!83;UBERON:0007285!1.23e-19!83;UBERON:0004290!7.69e-18!70;UBERON:0000486!5.10e-17!82;UBERON:0003914!2.72e-15!118;UBERON:0004872!7.08e-15!84;UBERON:0001134!1.18e-14!61;UBERON:0002036!1.18e-14!61;UBERON:0003082!1.18e-14!61;UBERON:0002385!1.88e-14!63;UBERON:0001015!1.88e-14!63;UBERON:0000383!1.88e-14!63;UBERON:0000490!8.81e-14!138;UBERON:0002100!7.49e-13!216;UBERON:0002049!8.88e-13!79;UBERON:0007798!8.88e-13!79;UBERON:0001637!3.75e-11!42;UBERON:0003509!3.75e-11!42;UBERON:0004572!3.75e-11!42;UBERON:0004535!7.96e-11!110;UBERON:0002199!9.62e-11!45;UBERON:0002416!9.62e-11!45;UBERON:0001009!1.11e-10!113;UBERON:0000119!4.46e-10!312;UBERON:0000055!7.71e-10!69;UBERON:0000468!7.71e-10!659;UBERON:0001981!8.25e-10!60;UBERON:0007500!8.25e-10!60;UBERON:0004537!8.25e-10!60;UBERON:0006965!8.25e-10!60;UBERON:0000483!1.33e-09!309;UBERON:0003102!1.99e-09!95;UBERON:0002097!2.04e-09!40;UBERON:0000475!2.46e-09!365;UBERON:0003104!1.03e-08!238;UBERON:0009142!1.03e-08!238;UBERON:0004573!1.31e-08!33;UBERON:0004571!1.31e-08!33;UBERON:0004923!5.14e-08!57;UBERON:0000948!1.42e-07!24;UBERON:0005498!1.42e-07!24;UBERON:0004140!1.42e-07!24;UBERON:0009881!1.42e-07!24;UBERON:0004141!1.42e-07!24;UBERON:0003084!1.42e-07!24;UBERON:0007005!1.42e-07!24;UBERON:0004139!1.42e-07!24;UBERON:0004291!1.42e-07!24;UBERON:0000481!4.98e-07!347;UBERON:0007100!5.01e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;6.16e-09;198!UBERON:0001637;1.31e-08;42!UBERON:0003509;1.31e-08;42!UBERON:0004572;1.31e-08;42!UBERON:0004573;2.84e-08;33!UBERON:0004571;2.84e-08;33!UBERON:0002097;1.62e-07;41!UBERON:0002199;2.68e-07;46!UBERON:0002416;2.68e-07;46!UBERON:0002385;4.46e-07;31!UBERON:0001015;4.46e-07;31!UBERON:0000383;4.46e-07;31!UBERON:0000478;5.99e-07;24 | |||
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|short_description=p18@FN1 | |||
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Latest revision as of 02:23, 20 September 2015
Short description: | p18@FN1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 319bp_to_ENST00000474036_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.05e-28 | 76 |
muscle precursor cell | 2.89e-19 | 58 |
myoblast | 2.89e-19 | 58 |
multi-potent skeletal muscle stem cell | 2.89e-19 | 58 |
muscle cell | 5.99e-18 | 55 |
multi fate stem cell | 2.68e-15 | 427 |
somatic stem cell | 1.69e-14 | 433 |
mesodermal cell | 3.40e-14 | 121 |
electrically responsive cell | 3.95e-14 | 61 |
electrically active cell | 3.95e-14 | 61 |
stem cell | 6.81e-14 | 441 |
embryonic cell | 8.09e-13 | 250 |
smooth muscle cell | 3.31e-12 | 43 |
smooth muscle myoblast | 3.31e-12 | 43 |
skin fibroblast | 1.15e-11 | 23 |
vascular associated smooth muscle cell | 7.11e-10 | 32 |
extraembryonic cell | 7.68e-10 | 19 |
cardiocyte | 8.86e-09 | 16 |
preadipocyte | 3.38e-08 | 12 |
stromal cell | 3.01e-07 | 28 |