FFCP PHASE1:Hg19::chr3:124606074..124606198,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3693 | |EntrezGene=3693 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6160 | |HGNC=6160 | ||
|TSSclassifier=strong | |||
|UniProt=P18084 | |UniProt=P18084 | ||
|association_with_transcript=0bp_to_ENST00000296181,NM_002213,uc003eho.2_5end | |association_with_transcript=0bp_to_ENST00000296181,NM_002213,uc003eho.2_5end | ||
|cluster_id=chr3:124606074..124606198,- | |||
|coexpression_cluster_id=C2716 | |coexpression_cluster_id=C2716 | ||
|description=CAGE_peak_1_at_ITGB5_5end | |description=CAGE_peak_1_at_ITGB5_5end | ||
|id=chr3:124606074..124606198,- | |id=chr3:124606074..124606198,- | ||
|ontology_enrichment_celltype=CL:0000134;9.15e-10;55!CL:0000359;1.67e-09;32!CL:0000136;9.04e-09;13!CL:0000048;1.38e-08;58!CL:0000192;2.49e-08;43!CL:0002320;5.40e-08;188!CL:0002334;7.17e-08;12!CL:0000723;1.22e-07;61!CL:0000057;3.68e-07;73 | |ontology_enrichment_celltype=CL:0000055!2.91e-32!180;CL:0000057!8.46e-18!75;CL:0000222!6.92e-16!119;CL:0000680!6.91e-13!57;CL:0000056!6.91e-13!57;CL:0000355!6.91e-13!57;CL:0000183!1.36e-12!59;CL:0000220!1.43e-12!246;CL:0002321!1.86e-12!248;CL:0000192!9.23e-12!42;CL:0000514!9.23e-12!42;CL:0000187!1.23e-11!54;CL:0000359!5.52e-10!32;CL:0000393!6.57e-10!60;CL:0000211!6.57e-10!60;CL:0000136!1.83e-09!15;CL:0002334!7.79e-08!12;CL:0000548!6.58e-07!679;CL:0000004!6.58e-07!679;CL:0000255!6.58e-07!679 | ||
| | |ontology_enrichment_celltype_v019=CL:0000134;9.15e-10;55!CL:0000359;1.67e-09;32!CL:0000136;9.04e-09;13!CL:0000048;1.38e-08;58!CL:0000192;2.49e-08;43!CL:0002320;5.40e-08;188!CL:0002334;7.17e-08;12!CL:0000723;1.22e-07;61!CL:0000057;3.68e-07;73 | ||
|ontology_enrichment_disease=DOID:2394;5.70e-07;14 | |ontology_enrichment_celltype_v019_2=CL:0000057,2.01e-18,76;CL:0000222,6.19e-16,121;CL:0002321,1.20e-12,250;CL:0000680,1.63e-12,58;CL:0000056,1.63e-12,58;CL:0000355,1.63e-12,58;CL:0000192,2.55e-11,43;CL:0000514,2.55e-11,43;CL:0000187,2.83e-11,55;CL:0000359,5.08e-10,32;CL:0000393,1.29e-09,61;CL:0000211,1.29e-09,61;CL:0000136,1.69e-09,15;CL:0002334,7.32e-08,12 | ||
|ontology_enrichment_uberon=UBERON:0004573;6.00e-10;33!UBERON:0004571;6.00e-10;33!UBERON:0001637;1.57e-09;42!UBERON:0003509;1.57e-09;42!UBERON:0004572;1.57e-09;42!UBERON:0002384;8.86e-08;198!UBERON:0000947;3.28e-07;21!UBERON:0010191;3.28e-07;21!UBERON:0001013;3.43e-07;14!UBERON:0003914;6.60e-07;74 | |ontology_enrichment_development_v019=CL:0000514;2.49e-08;43!CL:0000355;8.92e-07;58 | ||
|ontology_enrichment_disease=DOID:2394!5.94e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.70e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.63e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003914!1.35e-19!118;UBERON:0005256!6.82e-19!143;UBERON:0002100!9.31e-19!216;UBERON:0004872!2.47e-17!84;UBERON:0000468!2.51e-16!659;UBERON:0000926!5.54e-14!448;UBERON:0004120!5.54e-14!448;UBERON:0006603!5.54e-14!448;UBERON:0000475!7.09e-14!365;UBERON:0003104!7.56e-14!238;UBERON:0009142!7.56e-14!238;UBERON:0000467!1.46e-13!625;UBERON:0000914!2.32e-13!83;UBERON:0002329!2.32e-13!83;UBERON:0003077!2.32e-13!83;UBERON:0003059!2.32e-13!83;UBERON:0007282!2.32e-13!83;UBERON:0009618!2.32e-13!83;UBERON:0007285!2.32e-13!83;UBERON:0000480!2.50e-13!626;UBERON:0001981!5.37e-13!60;UBERON:0007500!5.37e-13!60;UBERON:0004537!5.37e-13!60;UBERON:0006965!5.37e-13!60;UBERON:0004290!5.38e-13!70;UBERON:0001637!7.91e-13!42;UBERON:0003509!7.91e-13!42;UBERON:0004572!7.91e-13!42;UBERON:0000486!8.54e-13!82;UBERON:0002049!1.67e-12!79;UBERON:0007798!1.67e-12!79;UBERON:0000490!2.21e-12!138;UBERON:0000055!2.62e-12!69;UBERON:0001134!1.16e-11!61;UBERON:0002036!1.16e-11!61;UBERON:0003082!1.16e-11!61;UBERON:0002385!1.81e-11!63;UBERON:0001015!1.81e-11!63;UBERON:0000383!1.81e-11!63;UBERON:0001009!2.32e-11!113;UBERON:0004535!4.92e-11!110;UBERON:0004573!6.86e-11!33;UBERON:0004571!6.86e-11!33;UBERON:0000119!7.39e-11!312;UBERON:0000483!9.82e-11!309;UBERON:0000481!6.20e-10!347;UBERON:0000477!6.26e-09!286;UBERON:0002050!2.31e-08!605;UBERON:0005423!2.31e-08!605;UBERON:0000923!2.44e-08!604;UBERON:0005291!2.44e-08!604;UBERON:0006598!2.44e-08!604;UBERON:0002532!2.44e-08!604;UBERON:0000922!3.39e-08!612;UBERON:0004923!4.51e-08!57;UBERON:0004111!4.72e-08!241;UBERON:0003102!5.85e-08!95;UBERON:0003886!7.84e-08!63;UBERON:0009569!9.23e-08!113;UBERON:0000466!1.17e-07!126;UBERON:0002553!1.47e-07!70;UBERON:0001048!1.91e-07!168;UBERON:0000947!3.52e-07!21;UBERON:0010191!3.52e-07!21;UBERON:0001013!3.61e-07!14;UBERON:0002199!4.63e-07!45;UBERON:0002416!4.63e-07!45;UBERON:0007100!9.86e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.00e-10;33!UBERON:0004571;6.00e-10;33!UBERON:0001637;1.57e-09;42!UBERON:0003509;1.57e-09;42!UBERON:0004572;1.57e-09;42!UBERON:0002384;8.86e-08;198!UBERON:0000947;3.28e-07;21!UBERON:0010191;3.28e-07;21!UBERON:0001013;3.43e-07;14!UBERON:0003914;6.60e-07;74 | |||
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| ||
|short_description=p1@ITGB5 | |short_description=p1@ITGB5 | ||
}} | }} |
Latest revision as of 02:41, 20 September 2015
Short description: | p1@ITGB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ITGB5_5end |
Coexpression cluster: | C2716_Osteoblast_leiomyoma_Preadipocyte_Adipocyte_mesenchymal_Smooth_Mesothelial |
Association with transcript: | 0bp_to_ENST00000296181, NM_002213, uc003eho.2_5end |
EntrezGene: | ITGB5 |
HGNC: | 6160 |
UniProt: | P18084 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.01e-18 | 76 |
mesodermal cell | 6.19e-16 | 121 |
embryonic cell | 1.20e-12 | 250 |
muscle precursor cell | 1.63e-12 | 58 |
myoblast | 1.63e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.63e-12 | 58 |
smooth muscle cell | 2.55e-11 | 43 |
smooth muscle myoblast | 2.55e-11 | 43 |
muscle cell | 2.83e-11 | 55 |
vascular associated smooth muscle cell | 5.08e-10 | 32 |
electrically responsive cell | 1.29e-09 | 61 |
electrically active cell | 1.29e-09 | 61 |
fat cell | 1.69e-09 | 15 |
preadipocyte | 7.32e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.63e-07 | 14 |