FFCP PHASE1:Hg19::chr1:205325698..205325721,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55220 | |EntrezGene=55220 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25573 | |HGNC=25573 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000460687_5end | |association_with_transcript=0bp_to_ENST00000460687_5end | ||
|cluster_id=chr1:205325698..205325721,- | |||
|coexpression_cluster_id=C102 | |coexpression_cluster_id=C102 | ||
|description=CAGE_peak_5_at_KLHDC8A_5end | |description=CAGE_peak_5_at_KLHDC8A_5end | ||
Latest revision as of 02:48, 20 September 2015
| Short description: | p5@KLHDC8A |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_KLHDC8A_5end |
| Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
| Association with transcript: | 0bp_to_ENST00000460687_5end |
| EntrezGene: | KLHDC8A |
| HGNC: | 25573 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@KLHDC8A |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuronal stem cell | 7.88e-18 | 8 |
| neural cell | 2.25e-09 | 25 |
| Merkel cell | 5.49e-09 | 2 |
| neurectodermal cell | 7.99e-09 | 59 |
| ectodermal cell | 3.19e-07 | 72 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| cranial nerve II | 1.93e-16 | 1 |
| cranial nerve | 1.93e-16 | 1 |
| nerve trunk | 1.93e-16 | 1 |
| nerve connecting eye with brain | 1.93e-16 | 1 |
| nerve | 1.93e-16 | 1 |
| retinal neural layer | 1.93e-16 | 1 |
| presumptive neural retina | 1.93e-16 | 1 |
| neural tissue | 6.94e-09 | 2 |
| multi cell component structure | 6.94e-09 | 2 |
| neuron projection bundle | 6.94e-09 | 2 |
Showing 1 to 10 of 11 entries
