FFCP PHASE1:Hg19::chr3:126191157..126191171,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79364 | |EntrezGene=79364 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=28160 | |HGNC=28160 | ||
|TSSclassifier=strong | |||
|UniProt=Q2QGD7 | |UniProt=Q2QGD7 | ||
|association_with_transcript=-110bp_to_BC002940,BC012729_5end | |association_with_transcript=-110bp_to_BC002940,BC012729_5end | ||
|cluster_id=chr3:126191157..126191171,- | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_4_at_ZXDC_5end | |description=CAGE_peak_4_at_ZXDC_5end | ||
|id=chr3:126191157..126191171,- | |id=chr3:126191157..126191171,- | ||
|ontology_enrichment_celltype=CL:0000860;1.26e-118;33!CL:0002057;1.26e-118;33!CL:0000473;8.49e-82;39!CL:0000234;8.49e-82;39!CL:0000576;2.23e-55;48!CL:0000766;4.68e-35;69!CL:0000763;4.85e-17;100!CL:0002087;1.33e-12;104!CL:0000094;8.05e-12;8!CL:0000738;4.28e-10;136!CL:0000767;1.09e-08;3!CL:0000081;1.22e-08;11 | |ontology_enrichment_celltype=CL:0002057!2.30e-59!42;CL:0000860!9.60e-55!45;CL:0000766!1.07e-43!76;CL:0002009!6.39e-39!65;CL:0002194!5.51e-38!63;CL:0000576!5.51e-38!63;CL:0000040!5.51e-38!63;CL:0000559!5.51e-38!63;CL:0000557!3.92e-37!71;CL:0000839!1.58e-35!70;CL:0000738!2.52e-29!140;CL:0000763!2.61e-29!112;CL:0000049!2.61e-29!112;CL:0002087!8.84e-25!119;CL:0000037!6.21e-24!172;CL:0000566!6.21e-24!172;CL:0002031!2.33e-23!124;CL:0000988!6.64e-22!182;CL:0002032!1.05e-21!165;CL:0000837!1.05e-21!165;CL:0000094!4.15e-08!8 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.26e-118;33!CL:0002057;1.26e-118;33!CL:0000473;8.49e-82;39!CL:0000234;8.49e-82;39!CL:0000576;2.23e-55;48!CL:0000766;4.68e-35;69!CL:0000763;4.85e-17;100!CL:0002087;1.33e-12;104!CL:0000094;8.05e-12;8!CL:0000738;4.28e-10;136!CL:0000767;1.09e-08;3!CL:0000081;1.22e-08;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.47e-102,42;CL:0002057,6.47e-102,42;CL:0000473,1.48e-88,48;CL:0000234,1.48e-88,48;CL:0000766,4.03e-75,72;CL:0002194,7.64e-70,59;CL:0000576,7.64e-70,59;CL:0000040,7.64e-70,59;CL:0000559,7.64e-70,59;CL:0002009,1.99e-67,61;CL:0000839,5.09e-62,66;CL:0000557,4.94e-61,67;CL:0000763,1.47e-48,108;CL:0000049,1.47e-48,108;CL:0000738,1.56e-37,136;CL:0002087,1.17e-33,115;CL:0002031,4.71e-32,120;CL:0002032,6.70e-31,161;CL:0000837,6.70e-31,161;CL:0000037,2.15e-29,168;CL:0000988,1.25e-27,177;CL:0000094,8.79e-12,8;CL:0000134,4.89e-11,354;CL:0002320,1.03e-10,361;CL:0000219,1.45e-09,386;CL:0000767,1.18e-08,3;CL:0000081,1.30e-08,11;CL:0000048,3.71e-08,427;CL:0000723,5.80e-08,433;CL:0000034,1.03e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.20e-74;42!CL:0000049;4.44e-16;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.76e-34!80;UBERON:0001474!7.95e-31!86;UBERON:0002390!2.73e-29!102;UBERON:0003061!2.73e-29!102;UBERON:0002193!1.04e-25!112;UBERON:0004765!9.48e-25!101;UBERON:0001434!9.48e-25!101;UBERON:0002405!3.41e-23!115;UBERON:0002204!7.20e-13!167;UBERON:0003081!8.80e-10!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.63e-53,76;UBERON:0001474,4.38e-49,82;UBERON:0004765,2.55e-44,90;UBERON:0002405,9.65e-43,93;UBERON:0002390,2.53e-40,98;UBERON:0003061,2.53e-40,98;UBERON:0001434,2.01e-39,100;UBERON:0002193,3.76e-36,108;UBERON:0002204,1.27e-21,167;UBERON:0003081,7.09e-17,203;UBERON:0002384,2.87e-10,371;UBERON:0000926,5.34e-09,315;UBERON:0004120,5.34e-09,315;UBERON:0006603,5.34e-09,315 | |||
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| ||
|short_description=p4@ZXDC | |short_description=p4@ZXDC | ||
}} | }} |
Latest revision as of 04:15, 20 September 2015
Short description: | p4@ZXDC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ZXDC_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -110bp_to_BC002940, BC012729_5end |
EntrezGene: | ZXDC |
HGNC: | 28160 |
UniProt: | Q2QGD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.47e-102 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.47e-102 | 42 |
defensive cell | 1.48e-88 | 48 |
phagocyte | 1.48e-88 | 48 |
myeloid leukocyte | 4.03e-75 | 72 |
monopoietic cell | 7.64e-70 | 59 |
monocyte | 7.64e-70 | 59 |
monoblast | 7.64e-70 | 59 |
promonocyte | 7.64e-70 | 59 |
macrophage dendritic cell progenitor | 1.99e-67 | 61 |
myeloid lineage restricted progenitor cell | 5.09e-62 | 66 |
granulocyte monocyte progenitor cell | 4.94e-61 | 67 |
myeloid cell | 1.47e-48 | 108 |
common myeloid progenitor | 1.47e-48 | 108 |
leukocyte | 1.56e-37 | 136 |
nongranular leukocyte | 1.17e-33 | 115 |
hematopoietic lineage restricted progenitor cell | 4.71e-32 | 120 |
hematopoietic oligopotent progenitor cell | 6.70e-31 | 161 |
hematopoietic multipotent progenitor cell | 6.70e-31 | 161 |
hematopoietic stem cell | 2.15e-29 | 168 |
hematopoietic cell | 1.25e-27 | 177 |
granulocyte | 8.79e-12 | 8 |
mesenchymal cell | 4.89e-11 | 354 |
connective tissue cell | 1.03e-10 | 361 |
motile cell | 1.45e-09 | 386 |
basophil | 1.18e-08 | 3 |
blood cell | 1.30e-08 | 11 |
multi fate stem cell | 3.71e-08 | 427 |
somatic stem cell | 5.80e-08 | 433 |
stem cell | 1.03e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.63e-53 | 76 |
bone element | 4.38e-49 | 82 |
skeletal element | 2.55e-44 | 90 |
immune system | 9.65e-43 | 93 |
hematopoietic system | 2.53e-40 | 98 |
blood island | 2.53e-40 | 98 |
skeletal system | 2.01e-39 | 100 |
hemolymphoid system | 3.76e-36 | 108 |
musculoskeletal system | 1.27e-21 | 167 |
lateral plate mesoderm | 7.09e-17 | 203 |
connective tissue | 2.87e-10 | 371 |
mesoderm | 5.34e-09 | 315 |
mesoderm-derived structure | 5.34e-09 | 315 |
presumptive mesoderm | 5.34e-09 | 315 |