FFCP PHASE1:Hg19::chr10:99160984..99160999,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23223 | |EntrezGene=23223 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29100 | |HGNC=29100 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_ENST00000315563_5end | |association_with_transcript=40bp_to_ENST00000315563_5end | ||
|cluster_id=chr10:99160984..99160999,- | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_3_at_RRP12_5end | |description=CAGE_peak_3_at_RRP12_5end | ||
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|ontology_enrichment_celltype=CL:0002057!2.93e-29!42;CL:0000860!1.41e-26!45;CL:0000766!2.02e-26!76;CL:0000557!1.34e-23!71;CL:0002009!6.23e-21!65;CL:0000839!3.75e-20!70;CL:0000738!7.16e-20!140;CL:0002194!9.47e-20!63;CL:0000576!9.47e-20!63;CL:0000040!9.47e-20!63;CL:0000559!9.47e-20!63;CL:0000763!1.43e-18!112;CL:0000049!1.43e-18!112;CL:0000037!1.18e-16!172;CL:0000566!1.18e-16!172;CL:0002031!2.51e-15!124;CL:0000988!4.73e-15!182;CL:0002032!6.07e-15!165;CL:0000837!6.07e-15!165;CL:0002087!2.03e-14!119;CL:0002320!4.37e-10!365;CL:0000134!7.89e-10!358;CL:0000219!5.20e-07!390;CL:0002393!5.48e-07!9;CL:0002397!5.48e-07!9 | |ontology_enrichment_celltype=CL:0002057!2.93e-29!42;CL:0000860!1.41e-26!45;CL:0000766!2.02e-26!76;CL:0000557!1.34e-23!71;CL:0002009!6.23e-21!65;CL:0000839!3.75e-20!70;CL:0000738!7.16e-20!140;CL:0002194!9.47e-20!63;CL:0000576!9.47e-20!63;CL:0000040!9.47e-20!63;CL:0000559!9.47e-20!63;CL:0000763!1.43e-18!112;CL:0000049!1.43e-18!112;CL:0000037!1.18e-16!172;CL:0000566!1.18e-16!172;CL:0002031!2.51e-15!124;CL:0000988!4.73e-15!182;CL:0002032!6.07e-15!165;CL:0000837!6.07e-15!165;CL:0002087!2.03e-14!119;CL:0002320!4.37e-10!365;CL:0000134!7.89e-10!358;CL:0000219!5.20e-07!390;CL:0002393!5.48e-07!9;CL:0002397!5.48e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.46e-41;33!CL:0002057;8.46e-41;33!CL:0000576;6.62e-31;48!CL:0000473;2.29e-30;39!CL:0000234;2.29e-30;39!CL:0000766;1.76e-25;69!CL:0002087;1.28e-12;104!CL:0000763;1.12e-11;100!CL:0000094;8.14e-11;8!CL:0000738;1.33e-10;136!CL:0002393;1.38e-08;6!CL:0002397;1.38e-08;6!CL:0000219;3.76e-08;193!CL:0000624;1.37e-07;6!CL:0000081;2.56e-07;11!CL:0000988;5.43e-07;177 | |ontology_enrichment_celltype_v019=CL:0000860;8.46e-41;33!CL:0002057;8.46e-41;33!CL:0000576;6.62e-31;48!CL:0000473;2.29e-30;39!CL:0000234;2.29e-30;39!CL:0000766;1.76e-25;69!CL:0002087;1.28e-12;104!CL:0000763;1.12e-11;100!CL:0000094;8.14e-11;8!CL:0000738;1.33e-10;136!CL:0002393;1.38e-08;6!CL:0002397;1.38e-08;6!CL:0000219;3.76e-08;193!CL:0000624;1.37e-07;6!CL:0000081;2.56e-07;11!CL:0000988;5.43e-07;177 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.19e-56,42;CL:0002057,8.19e-56,42;CL:0000766,1.11e-51,72;CL:0000473,5.75e-51,48;CL:0000234,5.75e-51,48;CL:0000738,9.11e-48,136;CL:0000557,4.63e-46,67;CL:0002009,1.11e-41,61;CL:0000839,1.74e-40,66;CL:0002194,2.68e-39,59;CL:0000576,2.68e-39,59;CL:0000040,2.68e-39,59;CL:0000559,2.68e-39,59;CL:0000037,4.18e-38,168;CL:0002031,3.89e-37,120;CL:0002087,2.41e-35,115;CL:0000988,9.71e-35,177;CL:0000763,1.83e-34,108;CL:0000049,1.83e-34,108;CL:0002032,5.33e-34,161;CL:0000837,5.33e-34,161;CL:0002320,4.83e-22,361;CL:0000134,7.92e-22,354;CL:0000219,5.25e-17,386;CL:0000034,1.56e-16,441;CL:0000048,1.88e-16,427;CL:0000723,9.44e-16,433;CL:0002393,3.71e-12,9;CL:0002397,3.71e-12,9;CL:0000094,7.67e-11,8;CL:0000624,1.33e-07,6;CL:0000081,2.45e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;4.06e-40;42!CL:0000049;5.22e-10;108 | |ontology_enrichment_development_v019=CL:0002057;4.06e-40;42!CL:0000049;5.22e-10;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.70e-23!102;UBERON:0003061!7.70e-23!102;UBERON:0002371!1.94e-22!80;UBERON:0001474!1.50e-21!86;UBERON:0002193!2.43e-18!112;UBERON:0004765!1.30e-15!101;UBERON:0001434!1.30e-15!101;UBERON:0002405!1.24e-12!115;UBERON:0002384!3.83e-09!375;UBERON:0002204!4.32e-08!167;UBERON:0003081!6.21e-08!216 | |ontology_enrichment_uberon=UBERON:0002390!7.70e-23!102;UBERON:0003061!7.70e-23!102;UBERON:0002371!1.94e-22!80;UBERON:0001474!1.50e-21!86;UBERON:0002193!2.43e-18!112;UBERON:0004765!1.30e-15!101;UBERON:0001434!1.30e-15!101;UBERON:0002405!1.24e-12!115;UBERON:0002384!3.83e-09!375;UBERON:0002204!4.32e-08!167;UBERON:0003081!6.21e-08!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p3@RRP12 | |short_description=p3@RRP12 | ||
}} | }} |
Latest revision as of 06:23, 20 September 2015
Short description: | p3@RRP12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RRP12_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 40bp_to_ENST00000315563_5end |
EntrezGene: | RRP12 |
HGNC: | 29100 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.17e-45 | 76 |
hematopoietic system | 5.21e-44 | 98 |
blood island | 5.21e-44 | 98 |
bone element | 2.27e-42 | 82 |
skeletal element | 4.24e-41 | 90 |
hemolymphoid system | 7.77e-38 | 108 |
immune system | 3.13e-35 | 93 |
skeletal system | 6.90e-35 | 100 |
connective tissue | 4.27e-21 | 371 |
lateral plate mesoderm | 9.55e-20 | 203 |
musculoskeletal system | 3.27e-19 | 167 |
mesoderm | 1.63e-09 | 315 |
mesoderm-derived structure | 1.63e-09 | 315 |
presumptive mesoderm | 1.63e-09 | 315 |