FFCP PHASE1:Hg19::chr17:39768786..39768828,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3868 | |EntrezGene=3868 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6423 | |HGNC=6423 | ||
|TSSclassifier=strong | |||
|UniProt=P08779 | |UniProt=P08779 | ||
|association_with_transcript=111bp_to_S79867_5end | |association_with_transcript=111bp_to_S79867_5end | ||
|cluster_id=chr17:39768786..39768828,- | |||
|coexpression_cluster_id=C1778 | |||
|description=CAGE_peak_2_at_KRT16_5end | |description=CAGE_peak_2_at_KRT16_5end | ||
|id=chr17:39768786..39768828,- | |id=chr17:39768786..39768828,- | ||
|ontology_enrichment_celltype=CL:0002076!1.27e-28!43;CL:0002368!9.81e-24!13;CL:0002159!8.06e-20!13;CL:0000223!2.37e-19!59;CL:0000622!2.82e-17!5;CL:0000066!1.48e-14!254;CL:0000154!2.45e-14!6;CL:0002202!3.71e-13!9;CL:0002632!3.71e-13!9;CL:0002328!2.44e-11!3;CL:0002623!3.21e-11!3;CL:0002251!3.38e-11!21;CL:0000362!1.33e-10!8;CL:0000068!1.69e-10!3;CL:0000069!1.69e-10!3;CL:0000307!1.69e-10!3;CL:0000377!1.69e-10!3;CL:0002077!2.70e-10!33;CL:0000150!1.99e-09!9;CL:0000240!2.78e-09!6;CL:0000311!2.78e-09!6;CL:0000079!2.78e-09!6;CL:0000237!2.78e-09!6;CL:0000036!2.78e-09!6;CL:0000357!2.78e-09!6;CL:0000114!2.78e-09!6;CL:0000575!5.54e-08!2;CL:0000317!9.19e-08!2;CL:1000448!9.19e-08!2;CL:0002308!9.19e-08!2;CL:0002140!9.19e-08!2;CL:0002327!1.27e-07!4;CL:0000312!8.10e-07!5 | |ontology_enrichment_celltype=CL:0002076!1.27e-28!43;CL:0002368!9.81e-24!13;CL:0002159!8.06e-20!13;CL:0000223!2.37e-19!59;CL:0000622!2.82e-17!5;CL:0000066!1.48e-14!254;CL:0000154!2.45e-14!6;CL:0002202!3.71e-13!9;CL:0002632!3.71e-13!9;CL:0002328!2.44e-11!3;CL:0002623!3.21e-11!3;CL:0002251!3.38e-11!21;CL:0000362!1.33e-10!8;CL:0000068!1.69e-10!3;CL:0000069!1.69e-10!3;CL:0000307!1.69e-10!3;CL:0000377!1.69e-10!3;CL:0002077!2.70e-10!33;CL:0000150!1.99e-09!9;CL:0000240!2.78e-09!6;CL:0000311!2.78e-09!6;CL:0000079!2.78e-09!6;CL:0000237!2.78e-09!6;CL:0000036!2.78e-09!6;CL:0000357!2.78e-09!6;CL:0000114!2.78e-09!6;CL:0000575!5.54e-08!2;CL:0000317!9.19e-08!2;CL:1000448!9.19e-08!2;CL:0002308!9.19e-08!2;CL:0002140!9.19e-08!2;CL:0002327!1.27e-07!4;CL:0000312!8.10e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002328;1.49e-27;3!CL:0000622;2.74e-17;5!CL:0002368;4.06e-17;13!CL:0000312;8.42e-17;5!CL:0000362;2.45e-16;9!CL:0002159;3.24e-16;14!CL:0002202;3.43e-16;9!CL:0002632;3.43e-16;9!CL:0000154;1.66e-14;6!CL:0000240;4.21e-14;6!CL:0000311;4.21e-14;6!CL:0000079;4.21e-14;6!CL:0000237;4.21e-14;6!CL:0002623;2.25e-13;3!CL:0002076;1.90e-12;42!CL:0002077;4.69e-11;34!CL:0002252;3.00e-10;1!CL:0000150;7.53e-10;9!CL:0000197;5.84e-07;6!CL:0000098;5.84e-07;6!CL:0002167;5.84e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,8.22e-28,3;CL:0000622,3.07e-17,5;CL:0002368,4.28e-17,13;CL:0000312,1.26e-16,5;CL:0002202,3.24e-16,9;CL:0000362,3.24e-16,9;CL:0002632,3.24e-16,9;CL:0002076,3.39e-16,42;CL:0002159,4.06e-16,14;CL:0000154,1.82e-14,6;CL:0000240,5.90e-14,6;CL:0000311,5.90e-14,6;CL:0000079,5.90e-14,6;CL:0000237,5.90e-14,6;CL:0000036,5.90e-14,6;CL:0000357,5.90e-14,6;CL:0000114,5.90e-14,6;CL:0002623,2.63e-13,3;CL:0002077,2.17e-12,34;CL:0000223,2.18e-11,58;CL:0002252,2.50e-10,1;CL:0000066,6.25e-10,253;CL:0000150,8.00e-10,9;CL:0000197,5.10e-07,6;CL:0000098,5.10e-07,6;CL:0002167,5.10e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000357;4.21e-14;6!CL:0000114;4.21e-14;6!CL:0000223;2.79e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;8.53e-11;1!DOID:3149;8.53e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,8.95e-11,1;DOID:3149,8.95e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.22e-14!72;UBERON:0003102!1.63e-12!95;UBERON:0004119!1.66e-11!169;UBERON:0000925!1.66e-11!169;UBERON:0006595!1.66e-11!169;UBERON:0004815!2.44e-11!3;UBERON:0002031!2.44e-11!3;UBERON:0000166!3.79e-11!21;UBERON:0000161!8.08e-11!35;UBERON:0007196!9.45e-11!14;UBERON:0001558!9.45e-11!14;UBERON:0000065!3.04e-10!53;UBERON:0000165!8.67e-10!28;UBERON:0000930!8.67e-10!28;UBERON:0002185!1.36e-08!4;UBERON:0001003!3.05e-08!14;UBERON:0007376!3.05e-08!14;UBERON:0007383!3.05e-08!14;UBERON:0002419!9.19e-08!2;UBERON:0007771!9.19e-08!2;UBERON:0003297!9.19e-08!2;UBERON:0001821!9.19e-08!2;UBERON:0003487!9.19e-08!2;UBERON:0001820!9.19e-08!2;UBERON:0005089!9.19e-08!2;UBERON:0005088!9.19e-08!2;UBERON:0005178!1.01e-07!34;UBERON:0002224!1.01e-07!34;UBERON:0001911!1.27e-07!4;UBERON:0005333!1.27e-07!4;UBERON:0008425!1.27e-07!4;UBERON:0005311!1.27e-07!4;UBERON:0005181!1.90e-07!35;UBERON:0003126!1.93e-07!7;UBERON:0001005!1.93e-07!7;UBERON:0001444!2.46e-07!48;UBERON:0005153!8.11e-07!37;UBERON:0000077!8.90e-07!130 | |ontology_enrichment_uberon=UBERON:0001004!1.22e-14!72;UBERON:0003102!1.63e-12!95;UBERON:0004119!1.66e-11!169;UBERON:0000925!1.66e-11!169;UBERON:0006595!1.66e-11!169;UBERON:0004815!2.44e-11!3;UBERON:0002031!2.44e-11!3;UBERON:0000166!3.79e-11!21;UBERON:0000161!8.08e-11!35;UBERON:0007196!9.45e-11!14;UBERON:0001558!9.45e-11!14;UBERON:0000065!3.04e-10!53;UBERON:0000165!8.67e-10!28;UBERON:0000930!8.67e-10!28;UBERON:0002185!1.36e-08!4;UBERON:0001003!3.05e-08!14;UBERON:0007376!3.05e-08!14;UBERON:0007383!3.05e-08!14;UBERON:0002419!9.19e-08!2;UBERON:0007771!9.19e-08!2;UBERON:0003297!9.19e-08!2;UBERON:0001821!9.19e-08!2;UBERON:0003487!9.19e-08!2;UBERON:0001820!9.19e-08!2;UBERON:0005089!9.19e-08!2;UBERON:0005088!9.19e-08!2;UBERON:0005178!1.01e-07!34;UBERON:0002224!1.01e-07!34;UBERON:0001911!1.27e-07!4;UBERON:0005333!1.27e-07!4;UBERON:0008425!1.27e-07!4;UBERON:0005311!1.27e-07!4;UBERON:0005181!1.90e-07!35;UBERON:0003126!1.93e-07!7;UBERON:0001005!1.93e-07!7;UBERON:0001444!2.46e-07!48;UBERON:0005153!8.11e-07!37;UBERON:0000077!8.90e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.49e-27;3!UBERON:0002031;1.49e-27;3!UBERON:0002185;8.42e-17;5!UBERON:0000485;3.60e-12;7!UBERON:0001003;6.89e-10;15!UBERON:0007376;6.89e-10;15!UBERON:0007196;8.41e-10;15!UBERON:0001558;8.41e-10;15!UBERON:0001044;4.06e-07;6!UBERON:0003293;4.06e-07;6!UBERON:0003294;4.06e-07;6!UBERON:0010047;4.06e-07;6!UBERON:0003408;4.06e-07;6!UBERON:0000167;4.06e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,8.22e-28,3;UBERON:0002031,8.22e-28,3;UBERON:0002185,5.92e-17,5;UBERON:0001003,8.12e-10,15;UBERON:0007376,8.12e-10,15;UBERON:0007196,8.12e-10,15;UBERON:0001558,8.12e-10,15;UBERON:0007383,8.12e-10,15;UBERON:0000485,1.14e-09,9;UBERON:0003102,8.71e-08,99;UBERON:0001044,4.39e-07,6;UBERON:0003293,4.39e-07,6;UBERON:0003294,4.39e-07,6;UBERON:0010047,4.39e-07,6;UBERON:0000167,4.39e-07,6;UBERON:0001004,7.49e-07,74 | |||
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| ||
|short_description=p2@KRT16 | |short_description=p2@KRT16 | ||
}} | }} |
Latest revision as of 06:29, 20 September 2015
Short description: | p2@KRT16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KRT16_5end |
Coexpression cluster: | C1778_tongue_Corneal_Urothelial_salivary_Esophageal_Sebocyte_Keratinocyte |
Association with transcript: | 111bp_to_S79867_5end |
EntrezGene: | KRT16 |
HGNC: | 6423 |
UniProt: | P08779 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 8.22e-28 | 3 |
acinar cell | 3.07e-17 | 5 |
respiratory epithelial cell | 4.28e-17 | 13 |
keratinocyte | 1.26e-16 | 5 |
epithelial cell of tracheobronchial tree | 3.24e-16 | 9 |
epidermal cell | 3.24e-16 | 9 |
epithelial cell of lower respiratory tract | 3.24e-16 | 9 |
endo-epithelial cell | 3.39e-16 | 42 |
general ecto-epithelial cell | 4.06e-16 | 14 |
protein secreting cell | 1.82e-14 | 6 |
stratified squamous epithelial cell | 5.90e-14 | 6 |
keratin accumulating cell | 5.90e-14 | 6 |
stratified epithelial cell | 5.90e-14 | 6 |
keratinizing barrier epithelial cell | 5.90e-14 | 6 |
epithelial fate stem cell | 5.90e-14 | 6 |
stratified epithelial stem cell | 5.90e-14 | 6 |
surface ectodermal cell | 5.90e-14 | 6 |
acinar cell of salivary gland | 2.63e-13 | 3 |
ecto-epithelial cell | 2.17e-12 | 34 |
endodermal cell | 2.18e-11 | 58 |
epithelial cell of esophagus | 2.50e-10 | 1 |
epithelial cell | 6.25e-10 | 253 |
glandular epithelial cell | 8.00e-10 | 9 |
receptor cell | 5.10e-07 | 6 |
sensory epithelial cell | 5.10e-07 | 6 |
olfactory epithelial cell | 5.10e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 8.22e-28 | 3 |
epithelium of bronchus | 8.22e-28 | 3 |
bronchus | 5.92e-17 | 5 |
skin epidermis | 8.12e-10 | 15 |
outer epithelium | 8.12e-10 | 15 |
tracheobronchial tree | 8.12e-10 | 15 |
lower respiratory tract | 8.12e-10 | 15 |
enveloping layer of ectoderm | 8.12e-10 | 15 |
simple columnar epithelium | 1.14e-09 | 9 |
surface structure | 8.71e-08 | 99 |
saliva-secreting gland | 4.39e-07 | 6 |
gland of oral region | 4.39e-07 | 6 |
gland of foregut | 4.39e-07 | 6 |
oral gland | 4.39e-07 | 6 |
oral cavity | 4.39e-07 | 6 |
respiratory system | 7.49e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 8.95e-11 | 1 |
keratoacanthoma | 8.95e-11 | 1 |