FFCP PHASE1:Hg19::chr2:217538410..217538421,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3488 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5474 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-254bp_to_BC073984_5end | |||
|cluster_id=chr2:217538410..217538421,- | |||
|coexpression_cluster_id=C252 | |||
|description=CAGE_peak_41_at_IGFBP5_5end | |||
|id=chr2:217538410..217538421,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000327;3.96e-14;15!CL:0002615;1.19e-13;3!CL:0000153;1.42e-12;9!CL:0000447;1.42e-12;9!CL:0000197;5.09e-12;6!CL:0000098;5.09e-12;6!CL:0002167;5.09e-12;6!CL:0000136;8.53e-12;13!CL:0000499;1.08e-11;28!CL:0002617;5.17e-10;2!CL:0000151;9.97e-08;36!CL:0000214;2.51e-07;3!CL:0000138;3.20e-07;6!CL:0000632;4.04e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000327,3.89e-14,15;CL:0002615,1.93e-13,3;CL:0000153,1.23e-12,9;CL:0000447,1.23e-12,9;CL:0000197,2.88e-12,6;CL:0000098,2.88e-12,6;CL:0002167,2.88e-12,6;CL:0000499,1.10e-11,28;CL:0000136,4.87e-10,15;CL:0002617,5.81e-10,2;CL:0000151,9.43e-09,36;CL:0000214,2.40e-07,3;CL:0000058,2.90e-07,6;CL:0000138,2.90e-07,6;CL:0000632,4.71e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;5.54e-15;3!DOID:127;5.54e-15;3!DOID:0060072;2.36e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.96e-15,3;DOID:127,4.96e-15,3;DOID:0060072,2.18e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0000310!2.31e-08!10;UBERON:0001443!1.97e-07!11;UBERON:0004457!8.28e-07!12;UBERON:0000042!8.28e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.15e-17;9!UBERON:0000042;1.15e-17;9!UBERON:0003688;5.09e-12;6!UBERON:0002358;5.09e-12;6!UBERON:0003684;5.09e-12;6!UBERON:0001178;5.09e-12;6!UBERON:0005406;2.32e-10;2!UBERON:0000310;2.26e-07;10!UBERON:0006915;2.51e-07;3!UBERON:0007616;2.51e-07;3!UBERON:0002217;2.51e-07;3!UBERON:0002018;2.51e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,5.76e-13,12;UBERON:0000042,5.76e-13,12;UBERON:0003688,8.01e-12,6;UBERON:0002358,8.01e-12,6;UBERON:0003684,8.01e-12,6;UBERON:0001178,8.01e-12,6;UBERON:0005406,2.02e-10,2;UBERON:0006915,2.40e-07,3;UBERON:0007616,2.40e-07,3;UBERON:0002217,2.40e-07,3;UBERON:0002018,2.40e-07,3;UBERON:0000310,2.68e-07,10 | |||
|phase1_expression=1.09007027562334,2.99740733447376,1.40954404095971,1.0007329835313,1.34088328328186,2.61701557230111,0,0,0.261185628199839,0,0,0,0.527533956456907,0,0,0,0,0,0.487932798790507,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0,2.462390822334,0,1.45990461090791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0,0.213557388818567,1.90738711043606,0,0.103052529238439,0.515281080091258,0.930584281657949,0.168776332241266,0,0,0.0920498986422993,0,1.06502877754984,0.302256294682921,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.2347220339942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,1.06375246633948,3.12022310734098,0,0,0,0.428933980974443,1.62786481617433,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70362119990049,1.96271887676878,1.26161932027148,1.99140405487612,0,0,0,0,0,0,0.979005787313703,0.686286847621712,0,0,0,0,0,0,0.744323423456331,0.306923946576125,1.12264037773229,0.384417447767103,0,2.41280881715411,2.96836132889982,0,0,0.164254312027618,0.519254429183621,0,0,0,0,3.78887678943202,0.546273504020151,0.655622074797121,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,4.82051789532479,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0.37064843820784,0.143124886741991,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0.54907405947211,0.353437207037059,0,0,0,0,0.487426979262569,1.05650146756755,0.272999822815972,4.3835683905651,0,0,0.66343897524122,0.876901770507525,0,0,0,0,0,0,0,0,0,4.22215270595328,2.96365403663912,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0.422250816255987,0.796991953004279,0,0.251932747854276,0.306806047506464,0,0.933118762985422,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.262379999988587,0,0,0,0,0,0.291604613383254,0,0,0,0,0.110579259931225,0,0,0,0,1.46205491157214,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,0,0,1.35588444468319,0,0,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,2.44795722327172,0,0,0,0,1.28929632425987,0,0.279282401272254,0,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,6.12509802022086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0.662091970365432,0,2.71499800876856,3.45688596480507,3.91904832131291,0,0,0.851940108927109,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0.138348634936231,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0.797525143673985,1.04349012362347,0,0,0,0.727394636810238,0,0,1.59238355479446,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87943538059752,7.04364597912361,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.82731361184183,0,0,0,0.327543835020193,0,0,0,0,0.0634158101939068,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0.171488009437418,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0.215927591218621,0,0.500335809236594,0,0,0.521574816907738,1.60342272946051,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0.467878926924211,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0.4226557275834,0.339854229375634,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,1.29787968637137,0,0,0.126698501011437,0,0,0,0,0.227336094654718,0,0,0.103432995861895,0.426467963801962,0.23806443146374,0,0.124149428591716,0,0.509177266225319,0.202117188958219,0,0.684466602170562,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0.366724332548599,0,0,0.201273793591026,0 | |||
|short_description=p41@IGFBP5 | |||
}} |
Latest revision as of 06:55, 20 September 2015
Short description: | p41@IGFBP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_41_at_IGFBP5_5end |
Coexpression cluster: | C252_hepatic_Olfactory_sacrococcigeal_leiomyoma_normal_Synoviocyte_glioblastoma |
Association with transcript: | -254bp_to_BC073984_5end |
EntrezGene: | IGFBP5 |
HGNC: | 5474 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extracellular matrix secreting cell | 3.89e-14 | 15 |
adipocyte of omentum tissue | 1.93e-13 | 3 |
GAG secreting cell | 1.23e-12 | 9 |
carbohydrate secreting cell | 1.23e-12 | 9 |
receptor cell | 2.88e-12 | 6 |
sensory epithelial cell | 2.88e-12 | 6 |
olfactory epithelial cell | 2.88e-12 | 6 |
stromal cell | 1.10e-11 | 28 |
fat cell | 4.87e-10 | 15 |
adipocyte of breast | 5.81e-10 | 2 |
secretory cell | 9.43e-09 | 36 |
synovial cell | 2.40e-07 | 3 |
chondroblast | 2.90e-07 | 6 |
chondrocyte | 2.90e-07 | 6 |
hepatic stellate cell | 4.71e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 5.76e-13 | 12 |
serous membrane | 5.76e-13 | 12 |
omentum | 8.01e-12 | 6 |
peritoneum | 8.01e-12 | 6 |
abdominal cavity | 8.01e-12 | 6 |
visceral peritoneum | 8.01e-12 | 6 |
perirenal fat | 2.02e-10 | 2 |
stratified squamous epithelium | 2.40e-07 | 3 |
layer of synovial tissue | 2.40e-07 | 3 |
synovial joint | 2.40e-07 | 3 |
synovial membrane of synovial joint | 2.40e-07 | 3 |
breast | 2.68e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.96e-15 | 3 |
leiomyoma | 4.96e-15 | 3 |
benign neoplasm | 2.18e-11 | 4 |