FFCP PHASE1:Hg19::chr11:7627084..7627095,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8495 | |EntrezGene=8495 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9250 | |HGNC=9250 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_uc001mfl.3_5end | |association_with_transcript=40bp_to_uc001mfl.3_5end | ||
|cluster_id=chr11:7627084..7627095,+ | |||
|description=CAGE_peak_25_at_PPFIBP2_5end | |description=CAGE_peak_25_at_PPFIBP2_5end | ||
|id=chr11:7627084..7627095,+ | |id=chr11:7627084..7627095,+ | ||
|ontology_enrichment_celltype=CL:0002541!2.49e-10!3 | |ontology_enrichment_celltype=CL:0002541!2.49e-10!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.31e-13;7!CL:0000586;1.31e-13;7!CL:0002253;2.90e-12;2!CL:0002541;1.30e-08;3!CL:0002586;1.30e-08;3!CL:0002563;9.10e-07;4!CL:0000149;9.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.15e-13,7;CL:0000586,1.15e-13,7;CL:0002253,2.90e-12,2;CL:0002586,1.21e-08,3;CL:0002541,1.51e-08,3;CL:0000149,8.61e-07,4;CL:0002563,9.11e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.07e-23;1!UBERON:0007297;1.48e-12;2!UBERON:0003104;3.49e-12;31!UBERON:0003918;7.74e-10;10!UBERON:0007687;7.74e-10;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!4.86e-11!3;UBERON:0004054!4.86e-11!3;UBERON:0000476!2.49e-10!3;UBERON:0000920!2.49e-10!3;UBERON:0005904!2.28e-08!4;UBERON:0005631!9.66e-08!14;UBERON:0000158!9.66e-08!14;UBERON:0003124!1.33e-07!7;UBERON:0002294!2.36e-07!7;UBERON:0001173!2.36e-07!7;UBERON:0004912!2.36e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.36e-30;3!UBERON:0004054;1.36e-30;3!UBERON:0000998;1.07e-23;1!UBERON:0006868;1.07e-23;1!UBERON:0001000;1.87e-23;1!UBERON:0005352;1.87e-23;1!UBERON:0005904;3.11e-23;4!UBERON:0000058;6.63e-10;10!UBERON:0003135;4.34e-09;11!UBERON:0001781;1.30e-08;3!UBERON:0003124;1.30e-08;3!UBERON:0001782;1.30e-08;3!UBERON:0000920;1.30e-08;3!UBERON:0001052;9.10e-07;4!UBERON:0001242;9.10e-07;4!UBERON:0001262;9.10e-07;4!UBERON:0004786;9.10e-07;4!UBERON:0004808;9.10e-07;4!UBERON:0001277;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.26e-30,3;UBERON:0004054,1.26e-30,3;UBERON:0000998,1.07e-23,1;UBERON:0006868,1.07e-23,1;UBERON:0001000,1.67e-23,1;UBERON:0005352,1.67e-23,1;UBERON:0005904,2.94e-23,4;UBERON:0003135,4.25e-09,11;UBERON:0001782,1.21e-08,3;UBERON:0005424,1.21e-08,3;UBERON:0000920,1.51e-08,3;UBERON:0001781,8.61e-07,4;UBERON:0001052,9.11e-07,4;UBERON:0001242,9.11e-07,4;UBERON:0001262,9.11e-07,4;UBERON:0004786,9.11e-07,4;UBERON:0004808,9.11e-07,4;UBERON:0001277,9.11e-07,4 | |||
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| ||
|short_description=p25@PPFIBP2 | |short_description=p25@PPFIBP2 | ||
}} | }} |
Latest revision as of 07:36, 20 September 2015
Short description: | p25@PPFIBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_PPFIBP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 40bp_to_uc001mfl.3_5end |
EntrezGene: | PPFIBP2 |
HGNC: | 9250 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.15e-13 | 7 |
germ cell | 1.15e-13 | 7 |
epithelial cell of large intestine | 2.90e-12 | 2 |
retinal pigment epithelial cell | 1.21e-08 | 3 |
chorionic membrane mesenchymal stem cell | 1.51e-08 | 3 |
visual pigment cell | 8.61e-07 | 4 |
intestinal epithelial cell | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.26e-30 | 3 |
internal male genitalia | 1.26e-30 | 3 |
seminal vesicle | 1.07e-23 | 1 |
seminal fluid secreting gland | 1.07e-23 | 1 |
vas deferens | 1.67e-23 | 1 |
spermatic cord | 1.67e-23 | 1 |
duct of male reproductive system | 2.94e-23 | 4 |
male reproductive organ | 4.25e-09 | 11 |
pigmented layer of retina | 1.21e-08 | 3 |
presumptive retinal pigmented epithelium | 1.21e-08 | 3 |
egg chorion | 1.51e-08 | 3 |
layer of retina | 8.61e-07 | 4 |
rectum | 9.11e-07 | 4 |
intestinal mucosa | 9.11e-07 | 4 |
wall of intestine | 9.11e-07 | 4 |
gastrointestinal system mucosa | 9.11e-07 | 4 |
gastrointestinal system epithelium | 9.11e-07 | 4 |
intestinal epithelium | 9.11e-07 | 4 |