FFCP PHASE1:Hg19::chr6:127676824..127676831,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=30851 | |HGNC=30851 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-69bp_to_ENST00000392459_5end | |association_with_transcript=-69bp_to_ENST00000392459_5end | ||
|cluster_id=chr6:127676824..127676831,+ | |||
|coexpression_cluster_id=C364 | |||
|description=CAGE_peak_1_at_YWHAZP4_5end | |description=CAGE_peak_1_at_YWHAZP4_5end | ||
|id=chr6:127676824..127676831,+ | |id=chr6:127676824..127676831,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.50e-40!42;CL:0000860!2.12e-36!45;CL:0000839!9.48e-32!70;CL:0000557!1.11e-31!71;CL:0000766!1.88e-29!76;CL:0002009!3.65e-29!65;CL:0002194!4.20e-27!63;CL:0000576!4.20e-27!63;CL:0000040!4.20e-27!63;CL:0000559!4.20e-27!63;CL:0000763!9.58e-27!112;CL:0000049!9.58e-27!112;CL:0002031!1.35e-18!124;CL:0000738!4.43e-18!140;CL:0002032!4.11e-17!165;CL:0000837!4.11e-17!165;CL:0000037!1.37e-15!172;CL:0000566!1.37e-15!172;CL:0000988!1.20e-13!182;CL:0002087!6.95e-13!119;CL:0000453!1.39e-07!5 | |ontology_enrichment_celltype=CL:0002057!4.50e-40!42;CL:0000860!2.12e-36!45;CL:0000839!9.48e-32!70;CL:0000557!1.11e-31!71;CL:0000766!1.88e-29!76;CL:0002009!3.65e-29!65;CL:0002194!4.20e-27!63;CL:0000576!4.20e-27!63;CL:0000040!4.20e-27!63;CL:0000559!4.20e-27!63;CL:0000763!9.58e-27!112;CL:0000049!9.58e-27!112;CL:0002031!1.35e-18!124;CL:0000738!4.43e-18!140;CL:0002032!4.11e-17!165;CL:0000837!4.11e-17!165;CL:0000037!1.37e-15!172;CL:0000566!1.37e-15!172;CL:0000988!1.20e-13!182;CL:0002087!6.95e-13!119;CL:0000453!1.39e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.68e-43;33!CL:0002057;5.68e-43;33!CL:0000473;2.18e-34;39!CL:0000234;2.18e-34;39!CL:0000576;2.22e-26;48!CL:0000766;4.97e-20;69!CL:0000453;2.06e-10;5!CL:0000763;1.03e-08;100!CL:0000738;9.19e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.72e-49,48;CL:0000234,6.72e-49,48;CL:0000860,3.06e-48,42;CL:0002057,3.06e-48,42;CL:0000557,1.10e-43,67;CL:0000839,8.05e-42,66;CL:0002009,1.14e-39,61;CL:0000766,1.26e-37,72;CL:0002194,1.18e-36,59;CL:0000576,1.18e-36,59;CL:0000040,1.18e-36,59;CL:0000559,1.18e-36,59;CL:0000763,7.27e-31,108;CL:0000049,7.27e-31,108;CL:0002031,7.70e-22,120;CL:0000738,2.12e-21,136;CL:0002032,1.05e-17,161;CL:0000837,1.05e-17,161;CL:0000037,2.24e-16,168;CL:0002087,3.02e-15,115;CL:0000988,7.88e-15,177;CL:0000453,2.15e-10,5 | |||
|ontology_enrichment_development_v019=CL:0002057;4.76e-34;42!CL:0000049;8.76e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.88e-27!80;UBERON:0001474!2.37e-24!86;UBERON:0004765!1.18e-21!101;UBERON:0001434!1.18e-21!101;UBERON:0002390!8.31e-19!102;UBERON:0003061!8.31e-19!102;UBERON:0002193!1.81e-16!112;UBERON:0002405!1.27e-15!115;UBERON:0002204!5.33e-12!167;UBERON:0001737!2.17e-10!9 | |ontology_enrichment_uberon=UBERON:0002371!1.88e-27!80;UBERON:0001474!2.37e-24!86;UBERON:0004765!1.18e-21!101;UBERON:0001434!1.18e-21!101;UBERON:0002390!8.31e-19!102;UBERON:0003061!8.31e-19!102;UBERON:0002193!1.81e-16!112;UBERON:0002405!1.27e-15!115;UBERON:0002204!5.33e-12!167;UBERON:0001737!2.17e-10!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.12e-11;9!UBERON:0001557;1.12e-11;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.03e-37,76;UBERON:0001474,2.81e-33,82;UBERON:0004765,9.27e-33,90;UBERON:0001434,4.08e-28,100;UBERON:0002405,8.56e-28,93;UBERON:0002390,1.03e-25,98;UBERON:0003061,1.03e-25,98;UBERON:0002193,3.80e-22,108;UBERON:0002204,2.45e-17,167;UBERON:0001737,1.01e-11,9;UBERON:0003081,7.45e-11,203 | |||
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|short_description=p1@YWHAZP4 | |short_description=p1@YWHAZP4 | ||
}} | }} |
Latest revision as of 14:57, 24 September 2015
Short description: | p1@YWHAZP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_YWHAZP4_5end |
Coexpression cluster: | C364_CD14_immature_CD14CD16_Aortic_CD4_Reticulocytes_Basophils |
Association with transcript: | -69bp_to_ENST00000392459_5end |
EntrezGene: | NA |
HGNC: | 30851 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.72e-49 | 48 |
phagocyte | 6.72e-49 | 48 |
classical monocyte | 3.06e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.06e-48 | 42 |
granulocyte monocyte progenitor cell | 1.10e-43 | 67 |
myeloid lineage restricted progenitor cell | 8.05e-42 | 66 |
macrophage dendritic cell progenitor | 1.14e-39 | 61 |
myeloid leukocyte | 1.26e-37 | 72 |
monopoietic cell | 1.18e-36 | 59 |
monocyte | 1.18e-36 | 59 |
monoblast | 1.18e-36 | 59 |
promonocyte | 1.18e-36 | 59 |
myeloid cell | 7.27e-31 | 108 |
common myeloid progenitor | 7.27e-31 | 108 |
hematopoietic lineage restricted progenitor cell | 7.70e-22 | 120 |
leukocyte | 2.12e-21 | 136 |
hematopoietic oligopotent progenitor cell | 1.05e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.05e-17 | 161 |
hematopoietic stem cell | 2.24e-16 | 168 |
nongranular leukocyte | 3.02e-15 | 115 |
hematopoietic cell | 7.88e-15 | 177 |
Langerhans cell | 2.15e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.03e-37 | 76 |
bone element | 2.81e-33 | 82 |
skeletal element | 9.27e-33 | 90 |
skeletal system | 4.08e-28 | 100 |
immune system | 8.56e-28 | 93 |
hematopoietic system | 1.03e-25 | 98 |
blood island | 1.03e-25 | 98 |
hemolymphoid system | 3.80e-22 | 108 |
musculoskeletal system | 2.45e-17 | 167 |
larynx | 1.01e-11 | 9 |
lateral plate mesoderm | 7.45e-11 | 203 |