FFCP PHASE1:Hg19::chr19:6393485..6393494,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2962 | |EntrezGene=2962 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4652 | |HGNC=4652 | ||
|TSSclassifier=strong | |||
|UniProt=P35269 | |UniProt=P35269 | ||
|association_with_transcript=-14bp_to_ENST00000394456_5end | |association_with_transcript=-14bp_to_ENST00000394456_5end | ||
|cluster_id=chr19:6393485..6393494,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_11_at_GTF2F1_5end | |description=CAGE_peak_11_at_GTF2F1_5end | ||
|id=chr19:6393485..6393494,- | |id=chr19:6393485..6393494,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002363;6.48e-18;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,6.48e-18,2;CL:0000008,6.48e-18,2 | |||
|ontology_enrichment_development_v019=CL:0000008;6.48e-18;2!UBERON:0009117;2.94e-14;10!UBERON:0005564;2.94e-14;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.93e-08!86;UBERON:0001049!2.36e-08!57;UBERON:0005068!2.36e-08!57;UBERON:0006241!2.36e-08!57;UBERON:0007135!2.36e-08!57;UBERON:0003075!5.09e-08!86;UBERON:0007284!5.09e-08!86;UBERON:0002616!7.76e-08!59;UBERON:0003056!1.10e-07!61;UBERON:0002346!2.82e-07!90;UBERON:0001017!5.24e-07!82;UBERON:0002780!6.43e-07!41;UBERON:0001890!6.43e-07!41;UBERON:0006240!6.43e-07!41;UBERON:0000073!8.11e-07!94;UBERON:0001016!8.11e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0003566;6.48e-18;2!UBERON:0001777;6.48e-18;2!UBERON:0000473;1.50e-17;8!UBERON:0003135;4.66e-13;11!UBERON:0003891;1.22e-09;4!UBERON:0000964;1.22e-09;4!UBERON:0010409;1.22e-09;4!UBERON:0000991;2.64e-07;21!UBERON:0003101;5.17e-07;22!UBERON:0000079;5.17e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,6.48e-18,2;UBERON:0001777,6.48e-18,2;UBERON:0000473,1.33e-17,8;UBERON:0003135,4.25e-13,11;UBERON:0003891,1.22e-09,4;UBERON:0000964,1.22e-09,4;UBERON:0010409,1.22e-09,4;UBERON:0004348,1.22e-09,4;UBERON:0005427,1.22e-09,4;UBERON:0000991,2.52e-07,21;UBERON:0009196,2.52e-07,21;UBERON:0009117,2.52e-07,21;UBERON:0005564,2.52e-07,21;UBERON:0004176,4.94e-07,22;UBERON:0003101,4.94e-07,22;UBERON:0000079,4.94e-07,22 | |||
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| ||
|short_description=p11@GTF2F1 | |short_description=p11@GTF2F1 | ||
}} | }} |
Latest revision as of 15:53, 24 September 2015
Short description: | p11@GTF2F1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_GTF2F1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -14bp_to_ENST00000394456_5end |
EntrezGene: | GTF2F1 |
HGNC: | 4652 |
UniProt: | P35269 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 6.48e-18 | 2 |
migratory cranial neural crest cell | 6.48e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 6.48e-18 | 2 |
substantia propria of cornea | 6.48e-18 | 2 |
testis | 1.33e-17 | 8 |
male reproductive organ | 4.25e-13 | 11 |
stroma | 1.22e-09 | 4 |
cornea | 1.22e-09 | 4 |
eye surface | 1.22e-09 | 4 |
optic eminence | 1.22e-09 | 4 |
corneal primordium | 1.22e-09 | 4 |
gonad | 2.52e-07 | 21 |
indifferent external genitalia | 2.52e-07 | 21 |
indifferent gonad | 2.52e-07 | 21 |
gonad primordium | 2.52e-07 | 21 |
external genitalia | 4.94e-07 | 22 |
male organism | 4.94e-07 | 22 |
male reproductive system | 4.94e-07 | 22 |