FFCP PHASE1:Hg19::chr18:77160282..77160343,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4772 | |EntrezGene=4772 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7775 | |HGNC=7775 | ||
|TSSclassifier=strong | |||
|UniProt=E7EP33,F5H4S8,B5B2M5,O95644,B5B2M9 | |UniProt=E7EP33,F5H4S8,B5B2M5,O95644,B5B2M9 | ||
|association_with_transcript=0bp_to_ENST00000329101,ENST00000427363,ENST00000545796,NM_172387,NM_172389,uc002lnf.2,uc002lng.2,uc010xfi.1,uc010xfj.1,uc010xfk.1_5end | |association_with_transcript=0bp_to_ENST00000329101,ENST00000427363,ENST00000545796,NM_172387,NM_172389,uc002lnf.2,uc002lng.2,uc010xfi.1,uc010xfj.1,uc010xfk.1_5end | ||
|cluster_id=chr18:77160282..77160343,+ | |||
|description=CAGE_peak_2_at_NFATC1_5end | |description=CAGE_peak_2_at_NFATC1_5end | ||
|id=chr18:77160282..77160343,+ | |id=chr18:77160282..77160343,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.77e-33!140;CL:0000037!4.78e-33!172;CL:0000566!4.78e-33!172;CL:0002032!1.25e-30!165;CL:0000837!1.25e-30!165;CL:0000988!1.02e-28!182;CL:0002087!6.46e-27!119;CL:0002031!1.01e-25!124;CL:0000766!8.34e-20!76;CL:0000763!3.25e-18!112;CL:0000049!3.25e-18!112;CL:0000557!2.27e-16!71;CL:0002057!8.64e-15!42;CL:0000839!9.16e-15!70;CL:0002194!1.09e-13!63;CL:0000576!1.09e-13!63;CL:0000040!1.09e-13!63;CL:0000559!1.09e-13!63;CL:0002009!1.99e-13!65;CL:0000542!1.01e-11!53;CL:0000051!1.01e-11!53;CL:0000860!1.13e-11!45;CL:0000838!2.72e-11!52;CL:0000115!2.69e-09!35;CL:0000791!6.02e-08!18;CL:0000789!6.02e-08!18;CL:0002420!6.02e-08!18;CL:0002419!6.02e-08!18;CL:0000790!6.02e-08!18;CL:0000134!6.09e-08!358;CL:0002320!9.55e-08!365;CL:0000236!2.46e-07!14 | |ontology_enrichment_celltype=CL:0000738!2.77e-33!140;CL:0000037!4.78e-33!172;CL:0000566!4.78e-33!172;CL:0002032!1.25e-30!165;CL:0000837!1.25e-30!165;CL:0000988!1.02e-28!182;CL:0002087!6.46e-27!119;CL:0002031!1.01e-25!124;CL:0000766!8.34e-20!76;CL:0000763!3.25e-18!112;CL:0000049!3.25e-18!112;CL:0000557!2.27e-16!71;CL:0002057!8.64e-15!42;CL:0000839!9.16e-15!70;CL:0002194!1.09e-13!63;CL:0000576!1.09e-13!63;CL:0000040!1.09e-13!63;CL:0000559!1.09e-13!63;CL:0002009!1.99e-13!65;CL:0000542!1.01e-11!53;CL:0000051!1.01e-11!53;CL:0000860!1.13e-11!45;CL:0000838!2.72e-11!52;CL:0000115!2.69e-09!35;CL:0000791!6.02e-08!18;CL:0000789!6.02e-08!18;CL:0002420!6.02e-08!18;CL:0002419!6.02e-08!18;CL:0000790!6.02e-08!18;CL:0000134!6.09e-08!358;CL:0002320!9.55e-08!365;CL:0000236!2.46e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000766;9.14e-11;69!CL:0000473;1.20e-10;39!CL:0000234;1.20e-10;39!CL:0000576;2.34e-10;48!CL:0000860;6.67e-10;33!CL:0002057;6.67e-10;33!CL:0002087;4.01e-09;104!CL:0000738;2.70e-08;136!CL:0000791;5.07e-08;18!CL:0000789;5.07e-08;18!CL:0002419;5.07e-08;18!CL:0000115;7.51e-08;36!CL:0000542;8.96e-08;53!CL:0000763;1.73e-07;100!CL:0000236;2.44e-07;13 | |ontology_enrichment_celltype_v019=CL:0000766;9.14e-11;69!CL:0000473;1.20e-10;39!CL:0000234;1.20e-10;39!CL:0000576;2.34e-10;48!CL:0000860;6.67e-10;33!CL:0002057;6.67e-10;33!CL:0002087;4.01e-09;104!CL:0000738;2.70e-08;136!CL:0000791;5.07e-08;18!CL:0000789;5.07e-08;18!CL:0002419;5.07e-08;18!CL:0000115;7.51e-08;36!CL:0000542;8.96e-08;53!CL:0000763;1.73e-07;100!CL:0000236;2.44e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.85e-37,136;CL:0000037,2.81e-36,168;CL:0002032,8.76e-34,161;CL:0000837,8.76e-34,161;CL:0000988,1.60e-31,177;CL:0002087,1.54e-30,115;CL:0002031,4.62e-29,120;CL:0000766,1.29e-23,72;CL:0000763,5.78e-21,108;CL:0000049,5.78e-21,108;CL:0000557,6.94e-20,67;CL:0000839,5.54e-18,66;CL:0000473,2.05e-17,48;CL:0000234,2.05e-17,48;CL:0002194,4.59e-17,59;CL:0000576,4.59e-17,59;CL:0000040,4.59e-17,59;CL:0000559,4.59e-17,59;CL:0002009,1.08e-16,61;CL:0000860,8.05e-15,42;CL:0002057,8.05e-15,42;CL:0000542,7.49e-12,53;CL:0000051,7.49e-12,53;CL:0000838,2.02e-11,52;CL:0000115,2.34e-09,36;CL:0000134,9.98e-09,354;CL:0002320,1.62e-08,361;CL:0000791,4.85e-08,18;CL:0000789,4.85e-08,18;CL:0002420,4.85e-08,18;CL:0002419,4.85e-08,18;CL:0000790,4.85e-08,18;CL:0000236,2.39e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;5.08e-11;42!CL:0000790;5.07e-08;18!CL:0000051;8.96e-08;53 | |ontology_enrichment_development_v019=CL:0002057;5.08e-11;42!CL:0000790;5.07e-08;18!CL:0000051;8.96e-08;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.44e-22!112;UBERON:0002390!9.98e-20!102;UBERON:0003061!9.98e-20!102;UBERON:0003081!2.84e-15!216;UBERON:0002371!6.17e-15!80;UBERON:0001474!1.55e-14!86;UBERON:0002405!5.66e-14!115;UBERON:0004765!2.34e-10!101;UBERON:0001434!2.34e-10!101;UBERON:0007023!1.48e-08!115;UBERON:0002384!7.28e-08!375 | |ontology_enrichment_uberon=UBERON:0002193!2.44e-22!112;UBERON:0002390!9.98e-20!102;UBERON:0003061!9.98e-20!102;UBERON:0003081!2.84e-15!216;UBERON:0002371!6.17e-15!80;UBERON:0001474!1.55e-14!86;UBERON:0002405!5.66e-14!115;UBERON:0004765!2.34e-10!101;UBERON:0001434!2.34e-10!101;UBERON:0007023!1.48e-08!115;UBERON:0002384!7.28e-08!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.12e-25,108;UBERON:0002390,5.43e-23,98;UBERON:0003061,5.43e-23,98;UBERON:0002405,4.13e-22,93;UBERON:0003081,8.93e-21,203;UBERON:0002371,5.34e-18,76;UBERON:0001474,2.07e-17,82;UBERON:0004765,2.57e-15,90;UBERON:0001434,2.68e-12,100;UBERON:0000926,9.51e-09,315;UBERON:0004120,9.51e-09,315;UBERON:0006603,9.51e-09,315;UBERON:0002384,1.17e-08,371;UBERON:0007023,1.47e-08,114;UBERON:0002204,3.18e-07,167 | |||
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| ||
|short_description=p2@NFATC1 | |short_description=p2@NFATC1 | ||
}} | }} |
Latest revision as of 19:33, 24 September 2015
Short description: | p2@NFATC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NFATC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000329101, ENST00000427363, ENST00000545796, NM_172387, NM_172389, uc002lnf.2, uc002lng.2, uc010xfi.1, uc010xfj.1, uc010xfk.1_5end |
EntrezGene: | NFATC1 |
HGNC: | 7775 |
UniProt: | E7EP33F5H4S8B5B2M5O95644B5B2M9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.12e-25 | 108 |
hematopoietic system | 5.43e-23 | 98 |
blood island | 5.43e-23 | 98 |
immune system | 4.13e-22 | 93 |
lateral plate mesoderm | 8.93e-21 | 203 |
bone marrow | 5.34e-18 | 76 |
bone element | 2.07e-17 | 82 |
skeletal element | 2.57e-15 | 90 |
skeletal system | 2.68e-12 | 100 |
mesoderm | 9.51e-09 | 315 |
mesoderm-derived structure | 9.51e-09 | 315 |
presumptive mesoderm | 9.51e-09 | 315 |
connective tissue | 1.17e-08 | 371 |
adult organism | 1.47e-08 | 114 |
musculoskeletal system | 3.18e-07 | 167 |