FFCP PHASE1:Hg19::chr6:133084564..133084578,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8875 | |EntrezGene=8875 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12706 | |HGNC=12706 | ||
|TSSclassifier=strong | |||
|UniProt=E9PQ75,E9PK31 | |UniProt=E9PQ75,E9PK31 | ||
|association_with_transcript=0bp_to_ENST00000531279,ENST00000532012_5end | |association_with_transcript=0bp_to_ENST00000531279,ENST00000532012_5end | ||
|cluster_id=chr6:133084564..133084578,- | |||
|description=CAGE_peak_3_at_VNN2_5end | |description=CAGE_peak_3_at_VNN2_5end | ||
|id=chr6:133084564..133084578,- | |id=chr6:133084564..133084578,- | ||
|ontology_enrichment_celltype=CL:0000738!4.68e-60!140;CL:0002087!1.70e-57!119;CL:0002031!6.41e-48!124;CL:0000037!1.91e-46!172;CL:0000566!1.91e-46!172;CL:0002032!6.65e-43!165;CL:0000837!6.65e-43!165;CL:0000988!1.08e-41!182;CL:0000542!1.98e-31!53;CL:0000051!1.98e-31!53;CL:0000838!4.37e-31!52;CL:0000766!2.25e-26!76;CL:0002057!1.32e-22!42;CL:0002194!1.38e-22!63;CL:0000576!1.38e-22!63;CL:0000040!1.38e-22!63;CL:0000559!1.38e-22!63;CL:0002009!2.22e-21!65;CL:0000945!1.12e-20!24;CL:0000826!1.12e-20!24;CL:0000860!3.41e-20!45;CL:0000839!1.09e-18!70;CL:0000557!3.36e-18!71;CL:0000763!4.37e-15!112;CL:0000049!4.37e-15!112;CL:0000791!5.52e-14!18;CL:0000789!5.52e-14!18;CL:0002420!5.52e-14!18;CL:0002419!5.52e-14!18;CL:0000790!5.52e-14!18;CL:0000236!6.83e-14!14;CL:0000625!5.27e-11!11;CL:0000084!2.81e-10!25;CL:0000827!2.81e-10!25;CL:0000094!1.54e-09!8;CL:0002393!3.97e-09!9;CL:0002397!3.97e-09!9;CL:0000134!1.23e-08!358;CL:0002320!6.51e-08!365 | |ontology_enrichment_celltype=CL:0000738!4.68e-60!140;CL:0002087!1.70e-57!119;CL:0002031!6.41e-48!124;CL:0000037!1.91e-46!172;CL:0000566!1.91e-46!172;CL:0002032!6.65e-43!165;CL:0000837!6.65e-43!165;CL:0000988!1.08e-41!182;CL:0000542!1.98e-31!53;CL:0000051!1.98e-31!53;CL:0000838!4.37e-31!52;CL:0000766!2.25e-26!76;CL:0002057!1.32e-22!42;CL:0002194!1.38e-22!63;CL:0000576!1.38e-22!63;CL:0000040!1.38e-22!63;CL:0000559!1.38e-22!63;CL:0002009!2.22e-21!65;CL:0000945!1.12e-20!24;CL:0000826!1.12e-20!24;CL:0000860!3.41e-20!45;CL:0000839!1.09e-18!70;CL:0000557!3.36e-18!71;CL:0000763!4.37e-15!112;CL:0000049!4.37e-15!112;CL:0000791!5.52e-14!18;CL:0000789!5.52e-14!18;CL:0002420!5.52e-14!18;CL:0002419!5.52e-14!18;CL:0000790!5.52e-14!18;CL:0000236!6.83e-14!14;CL:0000625!5.27e-11!11;CL:0000084!2.81e-10!25;CL:0000827!2.81e-10!25;CL:0000094!1.54e-09!8;CL:0002393!3.97e-09!9;CL:0002397!3.97e-09!9;CL:0000134!1.23e-08!358;CL:0002320!6.51e-08!365 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.91e-22;24!CL:0000236;2.33e-20;13!CL:0002087;5.37e-19;104!CL:0000542;3.33e-18;53!CL:0000576;9.41e-18;48!CL:0000094;2.09e-16;8!CL:0000766;1.66e-15;69!CL:0000473;1.84e-15;39!CL:0000234;1.84e-15;39!CL:0000738;5.08e-14;136!CL:0000860;1.11e-12;33!CL:0002057;1.11e-12;33!CL:0000791;2.57e-12;18!CL:0000789;2.57e-12;18!CL:0002419;2.57e-12;18!CL:0000625;1.78e-11;11!CL:0000081;1.83e-11;11!CL:0000988;2.75e-09;177!CL:0000763;2.91e-09;100!CL:0002393;3.29e-08;6!CL:0002397;3.29e-08;6!CL:0000084;4.06e-08;25!CL:0000775;5.73e-08;3!CL:0002619;7.19e-07;3 | |ontology_enrichment_celltype_v019=CL:0000945;1.91e-22;24!CL:0000236;2.33e-20;13!CL:0002087;5.37e-19;104!CL:0000542;3.33e-18;53!CL:0000576;9.41e-18;48!CL:0000094;2.09e-16;8!CL:0000766;1.66e-15;69!CL:0000473;1.84e-15;39!CL:0000234;1.84e-15;39!CL:0000738;5.08e-14;136!CL:0000860;1.11e-12;33!CL:0002057;1.11e-12;33!CL:0000791;2.57e-12;18!CL:0000789;2.57e-12;18!CL:0002419;2.57e-12;18!CL:0000625;1.78e-11;11!CL:0000081;1.83e-11;11!CL:0000988;2.75e-09;177!CL:0000763;2.91e-09;100!CL:0002393;3.29e-08;6!CL:0002397;3.29e-08;6!CL:0000084;4.06e-08;25!CL:0000775;5.73e-08;3!CL:0002619;7.19e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.99e-65,136;CL:0002087,5.78e-61,115;CL:0000037,5.95e-53,168;CL:0002031,9.61e-52,120;CL:0002032,6.03e-51,161;CL:0000837,6.03e-51,161;CL:0000988,3.21e-49,177;CL:0000766,4.20e-35,72;CL:0000838,2.90e-29,52;CL:0000473,1.42e-28,48;CL:0000234,1.42e-28,48;CL:0000542,1.56e-28,53;CL:0000051,1.56e-28,53;CL:0002194,1.30e-26,59;CL:0000576,1.30e-26,59;CL:0000040,1.30e-26,59;CL:0000559,1.30e-26,59;CL:0002009,1.94e-25,61;CL:0000860,4.42e-24,42;CL:0002057,4.42e-24,42;CL:0000839,8.12e-23,66;CL:0000945,1.35e-22,24;CL:0000826,1.35e-22,24;CL:0000763,2.20e-22,108;CL:0000049,2.20e-22,108;CL:0000557,2.43e-22,67;CL:0000236,4.27e-22,14;CL:0000094,9.65e-17,8;CL:0000134,5.34e-16,354;CL:0002320,2.64e-15,361;CL:0002393,5.89e-13,9;CL:0002397,5.89e-13,9;CL:0000219,7.08e-13,386;CL:0000791,3.18e-12,18;CL:0000789,3.18e-12,18;CL:0002420,3.18e-12,18;CL:0002419,3.18e-12,18;CL:0000790,3.18e-12,18;CL:0000081,1.06e-11,11;CL:0000625,1.89e-11,11;CL:0000048,5.93e-10,427;CL:0000723,1.48e-09,433;CL:0000034,4.81e-09,441;CL:0000084,4.68e-08,25;CL:0000827,4.68e-08,25;CL:0000775,5.65e-08,3;CL:0002619,7.02e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;3.33e-18;53!CL:0002057;3.47e-18;42!CL:0000790;2.57e-12;18!CL:0000049;9.77e-07;108 | |ontology_enrichment_development_v019=CL:0000051;3.33e-18;53!CL:0002057;3.47e-18;42!CL:0000790;2.57e-12;18!CL:0000049;9.77e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.23e-26!102;UBERON:0003061!3.23e-26!102;UBERON:0002193!9.20e-24!112;UBERON:0002405!2.25e-16!115;UBERON:0002371!4.28e-16!80;UBERON:0001474!7.12e-14!86;UBERON:0004765!3.41e-10!101;UBERON:0001434!3.41e-10!101;UBERON:0007023!5.20e-09!115;UBERON:0002384!7.30e-08!375;UBERON:0000178!9.78e-08!15;UBERON:0000179!9.78e-08!15;UBERON:0000463!9.78e-08!15 | |ontology_enrichment_uberon=UBERON:0002390!3.23e-26!102;UBERON:0003061!3.23e-26!102;UBERON:0002193!9.20e-24!112;UBERON:0002405!2.25e-16!115;UBERON:0002371!4.28e-16!80;UBERON:0001474!7.12e-14!86;UBERON:0004765!3.41e-10!101;UBERON:0001434!3.41e-10!101;UBERON:0007023!5.20e-09!115;UBERON:0002384!7.30e-08!375;UBERON:0000178!9.78e-08!15;UBERON:0000179!9.78e-08!15;UBERON:0000463!9.78e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.06e-14;15!UBERON:0000179;1.06e-14;15!UBERON:0000463;1.06e-14;15!UBERON:0002390;1.57e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.06e-14;15!UBERON:0000179;1.06e-14;15!UBERON:0000463;1.06e-14;15!UBERON:0002390;1.57e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.54e-33,98;UBERON:0003061,3.54e-33,98;UBERON:0002193,7.55e-29,108;UBERON:0002371,6.64e-20,76;UBERON:0002405,4.03e-18,93;UBERON:0001474,9.01e-18,82;UBERON:0004765,2.20e-15,90;UBERON:0000178,7.12e-15,15;UBERON:0000179,7.12e-15,15;UBERON:0000463,7.12e-15,15;UBERON:0002384,2.32e-14,371;UBERON:0001434,5.88e-13,100;UBERON:0003081,1.86e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29902789771517,0.656804715599566,0.472264687882075,1.96682138424452,1.91914699048606,1.39334510984468,0,0,0,1.70427841276664,0.853015394924529,0.293600439334847,1.10799081706375,2.80762226458198,2.17010870715852,3.13481663935894,1.6194683300949,3.34848237924443,1.45398238779565,0.377875943688809,0,1.85943229524548,0.411167888021826,0.309706370895104,2.01384674625505,1.0246428261164,0.945928919554341,2.06847408441971,0.645484683583826,0,1.31769637679823,0.272906150057846,0.449446968890169,1.83650335422542,0,1.27867425159808,2.63881040149373,1.99463657621632,0.426224750532694,1.45104619314292,0,0,1.25624332628372,1.5644487552606,1.3031330682307,1.81619850790011,0,0.632924774881769,1.90129757680748,0.850417199860174,3.56419697364239,6.40273197535022,4.95583746376971,5.78612112109488,1.42506371870624,1.39241674039363,5.29726045917438,1.75996244461323,3.82297027883492,7.11607403090844,3.84057200309856,6.4063357925762,1.14950487990897,2.64417949113945,2.86216126360609,2.84606484554724,1.76171156811282,2.6759125968766,0,0,0.263384084775077,0.590129310341499,0,0.205601498999509,0.334372990781356,4.88883399950386,2.8406868344084,1.94826728407911,0.334231370655521,0.589211814949674,0.221533894583621,0,0.384273959177026,0,0.493313713811028,3.59255023121603,1.15921234294021,2.66915813691709,2.1403266247177,3.1360657141493,0.113309342697566,1.14966148080576,2.06176467289578,1.51811815211702,2.54852331459277,3.25541726928209,3.8018081777935,1.50575119077773,3.19966527886046,4.99722906209383,4.2619905367923,4.10563998460523,0.604820229674197,0.802320587350522,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0.348259474598534,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70838706696137,0.702012795417713,4.01304138179566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0.602878754119172,0,0,3.64871341923571,2.51128545716063,0,0,0,0,0.144781306667579,0,0,21.5203476467572,1.97030760201927,1.50939302401662,0.77005821767849,0,0,0,0,0,8.98808428736619,14.9580729602012,5.8018171881045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,1.94142780736755,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,4.56702848308952,1.52927441428475,2.27858874869665,9.76750279376935,9.04997000789627,2.59389324477087,4.86028293514303,4.75875105776562,0,0,0,0.185803175125719,0.577076851905779,0.0711418433484141,0,0,5.93666647410337,0,0,0,0,0,0,8.80317244568337,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0.333926115068718,0,0,0.796991953004279,1.10513566212459,0,0,0.492339221844278,0,0.359473404589307,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.652931232636591,0,0,0.995261931078505,0.442287822516696,0.611030144933625,0,0,0,0.067401132980677,0,0,1.27718352450966,0,0,0,1.20990716048664,0,0.505492637027904,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0,0.397429223405979,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0.688992370603241,0.508039992394707,0,0.136203406111576,0,0,0,0,0,0,0,0.472834243795189,0.314727528809989,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0.226624183040251,0.146552233678082,1.32506888912221,0,0.26446520348538,0,0,0.854299300541557,0.314408610199332,2.48543433208317,0.992332043623902,0,2.67943716437971,0,0.544017803369474,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327130788511688,0,0,0,0.19998739585493,0,1.03328987796489,0,0,0,0.622077260032973,0,0,0,0,0.169732529954025,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0.163771917510097,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0,1.72850981333669,1.71488009437418,0.0679697329768317,0,0,0,0.706437835654626,0,0,0,0.863710364874486,0.9555033757741,0.285906176706625,0,0,0.347716544605159,0,0,0,0.691259661814092,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0.3086966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| ||
|short_description=p3@VNN2 | |short_description=p3@VNN2 | ||
}} | }} |
Latest revision as of 20:22, 24 September 2015
Short description: | p3@VNN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VNN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000531279, ENST00000532012_5end |
EntrezGene: | VNN2 |
HGNC: | 12706 |
UniProt: | E9PQ75E9PK31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.54e-33 | 98 |
blood island | 3.54e-33 | 98 |
hemolymphoid system | 7.55e-29 | 108 |
bone marrow | 6.64e-20 | 76 |
immune system | 4.03e-18 | 93 |
bone element | 9.01e-18 | 82 |
skeletal element | 2.20e-15 | 90 |
blood | 7.12e-15 | 15 |
haemolymphatic fluid | 7.12e-15 | 15 |
organism substance | 7.12e-15 | 15 |
connective tissue | 2.32e-14 | 371 |
skeletal system | 5.88e-13 | 100 |
lateral plate mesoderm | 1.86e-09 | 203 |