FFCP PHASE1:Hg19::chrX:30648208..30648217,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4001 | |HGNC=4001 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-197bp_to_ENST00000431458_5end | |association_with_transcript=-197bp_to_ENST00000431458_5end | ||
|cluster_id=chrX:30648208..30648217,+ | |||
|coexpression_cluster_id=C467 | |coexpression_cluster_id=C467 | ||
|description=CAGE_peak_1_at_FTLP2_5end | |description=CAGE_peak_1_at_FTLP2_5end | ||
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|ontology_enrichment_celltype=CL:0002194!1.28e-23!63;CL:0000576!1.28e-23!63;CL:0000040!1.28e-23!63;CL:0000559!1.28e-23!63;CL:0002009!8.37e-23!65;CL:0000839!1.09e-20!70;CL:0000557!5.61e-20!71;CL:0002057!1.93e-18!42;CL:0000766!7.51e-18!76;CL:0000860!2.13e-17!45;CL:0000763!2.04e-12!112;CL:0000049!2.04e-12!112;CL:0000048!9.32e-12!430;CL:0000723!5.32e-11!436;CL:0002371!5.47e-11!591;CL:0000034!4.98e-10!444;CL:0000144!7.82e-10!625;CL:0000548!1.21e-09!679;CL:0000004!1.21e-09!679;CL:0000255!1.21e-09!679;CL:0000012!3.17e-09!682;CL:0002320!6.28e-08!365;CL:0000003!9.04e-08!722;CL:0000134!4.86e-07!358 | |ontology_enrichment_celltype=CL:0002194!1.28e-23!63;CL:0000576!1.28e-23!63;CL:0000040!1.28e-23!63;CL:0000559!1.28e-23!63;CL:0002009!8.37e-23!65;CL:0000839!1.09e-20!70;CL:0000557!5.61e-20!71;CL:0002057!1.93e-18!42;CL:0000766!7.51e-18!76;CL:0000860!2.13e-17!45;CL:0000763!2.04e-12!112;CL:0000049!2.04e-12!112;CL:0000048!9.32e-12!430;CL:0000723!5.32e-11!436;CL:0002371!5.47e-11!591;CL:0000034!4.98e-10!444;CL:0000144!7.82e-10!625;CL:0000548!1.21e-09!679;CL:0000004!1.21e-09!679;CL:0000255!1.21e-09!679;CL:0000012!3.17e-09!682;CL:0002320!6.28e-08!365;CL:0000003!9.04e-08!722;CL:0000134!4.86e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000473;8.65e-21;39!CL:0000234;8.65e-21;39!CL:0000860;1.10e-19;33!CL:0002057;1.10e-19;33!CL:0000576;8.08e-19;48!CL:0000766;1.19e-11;69!CL:0000235;4.22e-07;6 | |ontology_enrichment_celltype_v019=CL:0000473;8.65e-21;39!CL:0000234;8.65e-21;39!CL:0000860;1.10e-19;33!CL:0002057;1.10e-19;33!CL:0000576;8.08e-19;48!CL:0000766;1.19e-11;69!CL:0000235;4.22e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.07e-33,59;CL:0000576,3.07e-33,59;CL:0000040,3.07e-33,59;CL:0000559,3.07e-33,59;CL:0002009,2.39e-31,61;CL:0000473,7.02e-30,48;CL:0000234,7.02e-30,48;CL:0000839,3.74e-27,66;CL:0000557,2.14e-26,67;CL:0000860,1.85e-24,42;CL:0002057,1.85e-24,42;CL:0000766,3.06e-24,72;CL:0000048,1.95e-17,427;CL:0000723,7.12e-17,433;CL:0000763,7.38e-16,108;CL:0000049,7.38e-16,108;CL:0000034,1.65e-15,441;CL:0002320,4.19e-13,361;CL:0000134,4.94e-12,354;CL:0002087,2.30e-09,115;CL:0000219,2.10e-08,386;CL:0002031,7.57e-08,120;CL:0000235,4.75e-07,6;CL:0000738,8.25e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;4.44e-18;42 | |ontology_enrichment_development_v019=CL:0002057;4.44e-18;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.02e-24!115;UBERON:0002204!1.59e-20!167;UBERON:0002193!2.62e-20!112;UBERON:0002371!2.20e-19!80;UBERON:0002390!1.62e-18!102;UBERON:0003061!1.62e-18!102;UBERON:0004765!3.53e-17!101;UBERON:0001434!3.53e-17!101;UBERON:0001474!3.94e-17!86;UBERON:0000926!5.49e-16!448;UBERON:0004120!5.49e-16!448;UBERON:0006603!5.49e-16!448;UBERON:0003081!1.65e-13!216;UBERON:0002384!2.15e-07!375;UBERON:0000923!3.94e-07!604;UBERON:0005291!3.94e-07!604;UBERON:0006598!3.94e-07!604;UBERON:0002532!3.94e-07!604;UBERON:0000468!6.21e-07!659;UBERON:0002050!6.30e-07!605;UBERON:0005423!6.30e-07!605 | |ontology_enrichment_uberon=UBERON:0002405!4.02e-24!115;UBERON:0002204!1.59e-20!167;UBERON:0002193!2.62e-20!112;UBERON:0002371!2.20e-19!80;UBERON:0002390!1.62e-18!102;UBERON:0003061!1.62e-18!102;UBERON:0004765!3.53e-17!101;UBERON:0001434!3.53e-17!101;UBERON:0001474!3.94e-17!86;UBERON:0000926!5.49e-16!448;UBERON:0004120!5.49e-16!448;UBERON:0006603!5.49e-16!448;UBERON:0003081!1.65e-13!216;UBERON:0002384!2.15e-07!375;UBERON:0000923!3.94e-07!604;UBERON:0005291!3.94e-07!604;UBERON:0006598!3.94e-07!604;UBERON:0002532!3.94e-07!604;UBERON:0000468!6.21e-07!659;UBERON:0002050!6.30e-07!605;UBERON:0005423!6.30e-07!605 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.31e-26,108;UBERON:0002405,1.36e-26,93;UBERON:0002371,2.14e-26,76;UBERON:0002204,1.54e-24,167;UBERON:0002390,1.75e-24,98;UBERON:0003061,1.75e-24,98;UBERON:0001474,1.66e-23,82;UBERON:0004765,6.42e-23,90;UBERON:0001434,2.85e-22,100;UBERON:0000926,1.23e-15,315;UBERON:0004120,1.23e-15,315;UBERON:0006603,1.23e-15,315;UBERON:0003081,3.88e-14,203;UBERON:0002384,2.27e-12,371 | |||
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| ||
|short_description=p1@FTLP2 | |short_description=p1@FTLP2 | ||
}} | }} |
Latest revision as of 20:33, 24 September 2015
Short description: | p1@FTLP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FTLP2_5end |
Coexpression cluster: | C467_CD14_Monocytederived_Mesenchymal_Macrophage_Dendritic_mucinous_liver |
Association with transcript: | -197bp_to_ENST00000431458_5end |
EntrezGene: | NA |
HGNC: | 4001 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.07e-33 | 59 |
monocyte | 3.07e-33 | 59 |
monoblast | 3.07e-33 | 59 |
promonocyte | 3.07e-33 | 59 |
macrophage dendritic cell progenitor | 2.39e-31 | 61 |
defensive cell | 7.02e-30 | 48 |
phagocyte | 7.02e-30 | 48 |
myeloid lineage restricted progenitor cell | 3.74e-27 | 66 |
granulocyte monocyte progenitor cell | 2.14e-26 | 67 |
classical monocyte | 1.85e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.85e-24 | 42 |
myeloid leukocyte | 3.06e-24 | 72 |
multi fate stem cell | 1.95e-17 | 427 |
somatic stem cell | 7.12e-17 | 433 |
myeloid cell | 7.38e-16 | 108 |
common myeloid progenitor | 7.38e-16 | 108 |
stem cell | 1.65e-15 | 441 |
connective tissue cell | 4.19e-13 | 361 |
mesenchymal cell | 4.94e-12 | 354 |
nongranular leukocyte | 2.30e-09 | 115 |
motile cell | 2.10e-08 | 386 |
hematopoietic lineage restricted progenitor cell | 7.57e-08 | 120 |
macrophage | 4.75e-07 | 6 |
leukocyte | 8.25e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.31e-26 | 108 |
immune system | 1.36e-26 | 93 |
bone marrow | 2.14e-26 | 76 |
musculoskeletal system | 1.54e-24 | 167 |
hematopoietic system | 1.75e-24 | 98 |
blood island | 1.75e-24 | 98 |
bone element | 1.66e-23 | 82 |
skeletal element | 6.42e-23 | 90 |
skeletal system | 2.85e-22 | 100 |
mesoderm | 1.23e-15 | 315 |
mesoderm-derived structure | 1.23e-15 | 315 |
presumptive mesoderm | 1.23e-15 | 315 |
lateral plate mesoderm | 3.88e-14 | 203 |
connective tissue | 2.27e-12 | 371 |