FFCP PHASE1:Hg19::chr14:61958865..61958878,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5583 | |EntrezGene=5583 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9403 | |HGNC=9403 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-32bp_to_ENST00000555628_5end | |association_with_transcript=-32bp_to_ENST00000555628_5end | ||
|cluster_id=chr14:61958865..61958878,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_12_at_PRKCH_5end | |description=CAGE_peak_12_at_PRKCH_5end | ||
|id=chr14:61958865..61958878,+ | |id=chr14:61958865..61958878,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.94e-81!42;CL:0000860!3.83e-75!45;CL:0000766!1.29e-62!76;CL:0002194!9.46e-50!63;CL:0000576!9.46e-50!63;CL:0000040!9.46e-50!63;CL:0000559!9.46e-50!63;CL:0002009!6.26e-48!65;CL:0000839!7.88e-44!70;CL:0000557!4.45e-43!71;CL:0000763!8.25e-39!112;CL:0000049!8.25e-39!112;CL:0000738!1.01e-33!140;CL:0002087!1.78e-26!119;CL:0000037!3.52e-25!172;CL:0000566!3.52e-25!172;CL:0000988!3.94e-23!182;CL:0002032!1.23e-22!165;CL:0000837!1.23e-22!165;CL:0000094!1.65e-22!8;CL:0002031!1.46e-20!124;CL:0000081!6.00e-16!11;CL:0000775!4.32e-10!3;CL:0000842!6.32e-09!3;CL:0000767!2.19e-08!3;CL:0000771!1.68e-07!2;CL:0000224!8.74e-07!4 | |ontology_enrichment_celltype=CL:0002057!2.94e-81!42;CL:0000860!3.83e-75!45;CL:0000766!1.29e-62!76;CL:0002194!9.46e-50!63;CL:0000576!9.46e-50!63;CL:0000040!9.46e-50!63;CL:0000559!9.46e-50!63;CL:0002009!6.26e-48!65;CL:0000839!7.88e-44!70;CL:0000557!4.45e-43!71;CL:0000763!8.25e-39!112;CL:0000049!8.25e-39!112;CL:0000738!1.01e-33!140;CL:0002087!1.78e-26!119;CL:0000037!3.52e-25!172;CL:0000566!3.52e-25!172;CL:0000988!3.94e-23!182;CL:0002032!1.23e-22!165;CL:0000837!1.23e-22!165;CL:0000094!1.65e-22!8;CL:0002031!1.46e-20!124;CL:0000081!6.00e-16!11;CL:0000775!4.32e-10!3;CL:0000842!6.32e-09!3;CL:0000767!2.19e-08!3;CL:0000771!1.68e-07!2;CL:0000224!8.74e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.57e-102;33!CL:0002057;2.57e-102;33!CL:0000473;7.89e-71;39!CL:0000234;7.89e-71;39!CL:0000576;1.04e-46;48!CL:0000766;2.40e-32;69!CL:0000763;1.08e-18;100!CL:0000094;7.32e-18;8!CL:0000775;1.15e-17;3!CL:0002087;4.02e-14;104!CL:0000081;6.36e-13;11!CL:0000771;8.15e-13;2!CL:0000738;2.11e-11;136!CL:0000219;9.55e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.19e-89,42;CL:0002057,3.19e-89,42;CL:0000473,2.22e-77,48;CL:0000234,2.22e-77,48;CL:0000766,3.38e-71,72;CL:0002194,8.58e-61,59;CL:0000576,8.58e-61,59;CL:0000040,8.58e-61,59;CL:0000559,8.58e-61,59;CL:0002009,1.19e-58,61;CL:0000839,7.38e-54,66;CL:0000557,5.53e-53,67;CL:0000763,1.16e-45,108;CL:0000049,1.16e-45,108;CL:0000738,1.66e-37,136;CL:0002087,4.32e-31,115;CL:0000037,3.28e-29,168;CL:0002032,1.09e-28,161;CL:0000837,1.09e-28,161;CL:0000988,2.06e-27,177;CL:0002031,2.63e-27,120;CL:0000094,6.83e-18,8;CL:0000775,1.03e-17,3;CL:0000081,6.06e-13,11;CL:0000771,8.15e-13,2;CL:0000134,1.62e-10,354;CL:0002320,3.46e-10,361;CL:0000219,5.07e-09,386;CL:0000034,6.79e-08,441;CL:0000048,1.36e-07,427;CL:0000723,2.14e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.58e-67;42!CL:0000049;7.40e-14;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.70e-47!102;UBERON:0003061!1.70e-47!102;UBERON:0002193!2.26e-44!112;UBERON:0002371!3.73e-37!80;UBERON:0001474!6.84e-34!86;UBERON:0002405!3.20e-29!115;UBERON:0004765!2.00e-27!101;UBERON:0001434!2.00e-27!101;UBERON:0003081!3.81e-19!216;UBERON:0002204!7.20e-13!167;UBERON:0000178!1.52e-10!15;UBERON:0000179!1.52e-10!15;UBERON:0000463!1.52e-10!15 | |ontology_enrichment_uberon=UBERON:0002390!1.70e-47!102;UBERON:0003061!1.70e-47!102;UBERON:0002193!2.26e-44!112;UBERON:0002371!3.73e-37!80;UBERON:0001474!6.84e-34!86;UBERON:0002405!3.20e-29!115;UBERON:0004765!2.00e-27!101;UBERON:0001434!2.00e-27!101;UBERON:0003081!3.81e-19!216;UBERON:0002204!7.20e-13!167;UBERON:0000178!1.52e-10!15;UBERON:0000179!1.52e-10!15;UBERON:0000463!1.52e-10!15 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.89e-46,76;UBERON:0002390,2.16e-43,98;UBERON:0003061,2.16e-43,98;UBERON:0001474,2.15e-42,82;UBERON:0002193,7.31e-39,108;UBERON:0004765,3.58e-38,90;UBERON:0002405,8.95e-37,93;UBERON:0001434,7.80e-34,100;UBERON:0002204,4.46e-18,167;UBERON:0003081,6.06e-18,203;UBERON:0002384,9.78e-10,371;UBERON:0000926,2.07e-09,315;UBERON:0004120,2.07e-09,315;UBERON:0006603,2.07e-09,315 | |||
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| ||
|short_description=p12@PRKCH | |short_description=p12@PRKCH | ||
}} | }} |
Latest revision as of 22:23, 24 September 2015
Short description: | p12@PRKCH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PRKCH_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -32bp_to_ENST00000555628_5end |
EntrezGene: | PRKCH |
HGNC: | 9403 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.19e-89 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.19e-89 | 42 |
defensive cell | 2.22e-77 | 48 |
phagocyte | 2.22e-77 | 48 |
myeloid leukocyte | 3.38e-71 | 72 |
monopoietic cell | 8.58e-61 | 59 |
monocyte | 8.58e-61 | 59 |
monoblast | 8.58e-61 | 59 |
promonocyte | 8.58e-61 | 59 |
macrophage dendritic cell progenitor | 1.19e-58 | 61 |
myeloid lineage restricted progenitor cell | 7.38e-54 | 66 |
granulocyte monocyte progenitor cell | 5.53e-53 | 67 |
myeloid cell | 1.16e-45 | 108 |
common myeloid progenitor | 1.16e-45 | 108 |
leukocyte | 1.66e-37 | 136 |
nongranular leukocyte | 4.32e-31 | 115 |
hematopoietic stem cell | 3.28e-29 | 168 |
hematopoietic oligopotent progenitor cell | 1.09e-28 | 161 |
hematopoietic multipotent progenitor cell | 1.09e-28 | 161 |
hematopoietic cell | 2.06e-27 | 177 |
hematopoietic lineage restricted progenitor cell | 2.63e-27 | 120 |
granulocyte | 6.83e-18 | 8 |
neutrophil | 1.03e-17 | 3 |
blood cell | 6.06e-13 | 11 |
eosinophil | 8.15e-13 | 2 |
mesenchymal cell | 1.62e-10 | 354 |
connective tissue cell | 3.46e-10 | 361 |
motile cell | 5.07e-09 | 386 |
stem cell | 6.79e-08 | 441 |
multi fate stem cell | 1.36e-07 | 427 |
somatic stem cell | 2.14e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.89e-46 | 76 |
hematopoietic system | 2.16e-43 | 98 |
blood island | 2.16e-43 | 98 |
bone element | 2.15e-42 | 82 |
hemolymphoid system | 7.31e-39 | 108 |
skeletal element | 3.58e-38 | 90 |
immune system | 8.95e-37 | 93 |
skeletal system | 7.80e-34 | 100 |
musculoskeletal system | 4.46e-18 | 167 |
lateral plate mesoderm | 6.06e-18 | 203 |
connective tissue | 9.78e-10 | 371 |
mesoderm | 2.07e-09 | 315 |
mesoderm-derived structure | 2.07e-09 | 315 |
presumptive mesoderm | 2.07e-09 | 315 |