FFCP PHASE1:Hg19::chr22:44464976..44464992,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29780 | |EntrezGene=29780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14653 | |HGNC=14653 | ||
|TSSclassifier=strong | |||
|UniProt=B0QYM8 | |UniProt=B0QYM8 | ||
|association_with_transcript=-4bp_to_NM_001243385_5end | |association_with_transcript=-4bp_to_NM_001243385_5end | ||
|cluster_id=chr22:44464976..44464992,+ | |||
|description=CAGE_peak_3_at_PARVB_5end | |description=CAGE_peak_3_at_PARVB_5end | ||
|id=chr22:44464976..44464992,+ | |id=chr22:44464976..44464992,+ | ||
|ontology_enrichment_celltype=CL:0000037!3.18e-62!172;CL:0000566!3.18e-62!172;CL:0002032!1.38e-59!165;CL:0000837!1.38e-59!165;CL:0000763!3.12e-58!112;CL:0000049!3.12e-58!112;CL:0000988!4.97e-58!182;CL:0000738!5.91e-54!140;CL:0000766!1.60e-51!76;CL:0000557!9.80e-50!71;CL:0002057!1.01e-49!42;CL:0000839!1.20e-48!70;CL:0002031!1.03e-47!124;CL:0000860!2.73e-45!45;CL:0002087!2.63e-42!119;CL:0002009!2.70e-42!65;CL:0002194!2.67e-40!63;CL:0000576!2.67e-40!63;CL:0000040!2.67e-40!63;CL:0000559!2.67e-40!63;CL:0000134!2.54e-15!358;CL:0002320!1.95e-14!365;CL:0002393!6.02e-12!9;CL:0002397!6.02e-12!9;CL:0000219!2.23e-11!390;CL:0000034!8.02e-09!444;CL:0000048!1.30e-08!430;CL:0002274!3.94e-08!5;CL:0000457!3.94e-08!5;CL:0002191!3.94e-08!5;CL:0000097!3.94e-08!5;CL:0000831!3.94e-08!5;CL:0002028!3.94e-08!5;CL:0000723!4.06e-08!436 | |ontology_enrichment_celltype=CL:0000037!3.18e-62!172;CL:0000566!3.18e-62!172;CL:0002032!1.38e-59!165;CL:0000837!1.38e-59!165;CL:0000763!3.12e-58!112;CL:0000049!3.12e-58!112;CL:0000988!4.97e-58!182;CL:0000738!5.91e-54!140;CL:0000766!1.60e-51!76;CL:0000557!9.80e-50!71;CL:0002057!1.01e-49!42;CL:0000839!1.20e-48!70;CL:0002031!1.03e-47!124;CL:0000860!2.73e-45!45;CL:0002087!2.63e-42!119;CL:0002009!2.70e-42!65;CL:0002194!2.67e-40!63;CL:0000576!2.67e-40!63;CL:0000040!2.67e-40!63;CL:0000559!2.67e-40!63;CL:0000134!2.54e-15!358;CL:0002320!1.95e-14!365;CL:0002393!6.02e-12!9;CL:0002397!6.02e-12!9;CL:0000219!2.23e-11!390;CL:0000034!8.02e-09!444;CL:0000048!1.30e-08!430;CL:0002274!3.94e-08!5;CL:0000457!3.94e-08!5;CL:0002191!3.94e-08!5;CL:0000097!3.94e-08!5;CL:0000831!3.94e-08!5;CL:0002028!3.94e-08!5;CL:0000723!4.06e-08!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.69e-56;33!CL:0002057;4.69e-56;33!CL:0000473;1.24e-45;39!CL:0000234;1.24e-45;39!CL:0000576;4.85e-43;48!CL:0000766;4.96e-40;69!CL:0000763;4.61e-23;100!CL:0002087;1.28e-16;104!CL:0000738;4.51e-15;136!CL:0002393;8.89e-14;6!CL:0002397;8.89e-14;6!CL:0000097;4.30e-12;5!CL:0000988;3.42e-11;177!CL:0000094;5.82e-09;8!CL:0000226;1.19e-07;3!CL:0000842;1.19e-07;3!CL:0000767;1.51e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.50e-83,72;CL:0000557,3.20e-80,67;CL:0000860,4.84e-79,42;CL:0002057,4.84e-79,42;CL:0000839,1.87e-78,66;CL:0000473,1.44e-77,48;CL:0000234,1.44e-77,48;CL:0000763,5.00e-77,108;CL:0000049,5.00e-77,108;CL:0002009,4.58e-68,61;CL:0000037,8.24e-67,168;CL:0000738,4.13e-65,136;CL:0002194,8.12e-65,59;CL:0000576,8.12e-65,59;CL:0000040,8.12e-65,59;CL:0000559,8.12e-65,59;CL:0002032,4.57e-64,161;CL:0000837,4.57e-64,161;CL:0000988,2.37e-62,177;CL:0002031,2.51e-59,120;CL:0002087,8.48e-50,115;CL:0000134,1.06e-20,354;CL:0002320,6.77e-20,361;CL:0002393,3.39e-18,9;CL:0002397,3.39e-18,9;CL:0000219,4.50e-17,386;CL:0000034,1.16e-14,441;CL:0000048,1.21e-13,427;CL:0000723,3.57e-13,433;CL:0000097,4.35e-12,5;CL:0002028,4.35e-12,5;CL:0000094,4.95e-09,8;CL:0000226,1.18e-07,3;CL:0000842,1.18e-07,3;CL:0000767,1.43e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.43e-56;42!CL:0000049;2.74e-19;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.33e-58!102;UBERON:0003061!1.33e-58!102;UBERON:0002193!6.09e-51!112;UBERON:0002371!2.23e-43!80;UBERON:0001474!7.03e-39!86;UBERON:0004765!3.22e-31!101;UBERON:0001434!3.22e-31!101;UBERON:0002405!1.17e-29!115;UBERON:0003081!6.89e-19!216;UBERON:0000178!9.40e-15!15;UBERON:0000179!9.40e-15!15;UBERON:0000463!9.40e-15!15;UBERON:0002204!2.58e-14!167;UBERON:0002384!1.09e-13!375 | |ontology_enrichment_uberon=UBERON:0002390!1.33e-58!102;UBERON:0003061!1.33e-58!102;UBERON:0002193!6.09e-51!112;UBERON:0002371!2.23e-43!80;UBERON:0001474!7.03e-39!86;UBERON:0004765!3.22e-31!101;UBERON:0001434!3.22e-31!101;UBERON:0002405!1.17e-29!115;UBERON:0003081!6.89e-19!216;UBERON:0000178!9.40e-15!15;UBERON:0000179!9.40e-15!15;UBERON:0000463!9.40e-15!15;UBERON:0002204!2.58e-14!167;UBERON:0002384!1.09e-13!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.81e-21;15!UBERON:0000179;8.81e-21;15!UBERON:0000463;8.81e-21;15!UBERON:0002390;5.42e-12;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.17e-87,98;UBERON:0003061,1.17e-87,98;UBERON:0002193,8.05e-78,108;UBERON:0002371,6.55e-69,76;UBERON:0001474,9.75e-63,82;UBERON:0002405,7.16e-58,93;UBERON:0004765,8.85e-56,90;UBERON:0001434,1.21e-48,100;UBERON:0003081,1.33e-32,203;UBERON:0002204,5.98e-23,167;UBERON:0000178,8.75e-21,15;UBERON:0000179,8.75e-21,15;UBERON:0000463,8.75e-21,15;UBERON:0002384,8.42e-19,371;UBERON:0000926,1.56e-14,315;UBERON:0004120,1.56e-14,315;UBERON:0006603,1.56e-14,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,12.9810211360138,21.4944462934439,20.7453605243542,0,0,0,0,0.284338464974843,0.587200878669695,50.9675775849327,87.2368346495116,55.5547829032581,0.895661896959697,1.6194683300949,0,6.25212426752128,13.2256580291083,6.79235371325885,11.6214518452842,13.1573724166984,16.7241440283356,3.74000110018796,9.99026755463492,8.74984250587765,13.1003358679915,17.4280864567633,20.3139729891513,8.84738995850242,10.0975275521403,8.53949240891322,13.4676912643197,18.6138835704134,12.7867425159808,3.62836430205388,5.58498241340569,7.6720455095885,11.6083695451434,19.8584828641899,15.5705562248894,5.27622197039161,8.86520961314342,8.47036494349955,9.08099253950053,18.7821594353658,13.607882659958,12.6753171787165,15.5201138974482,14.0471292490612,8.53697596713363,6.90813707070929,3.85741408072992,3.70516566863623,1.59133341759272,3.10529061399878,0,1.09227722252426,0.889509253863555,0.426730222566507,1.60158394814405,1.14950487990897,0,0.954053754535364,1.1384259382189,1.76171156811282,1.14681968437569,10.5737062863221,17.3757654524276,9.2184429671277,0.393419540227666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,1.24930726552346,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.398873881556595,1.90792499444274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80805118167085,0.891786973732369,0,0,0,0,0,0,61.090241499097,41.294715552203,21.3547959006995,37.182947981576,24.9960018184232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,3.15249216323084,0.431255149719035,2.31017465303547,0,0,0,0,0,0,2.99161459204025,5.38740167466846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4700345861659,35.8085573358904,14.3014927456615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41185864310528,3.66009631434861,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.188287601553558,0,0,0,0,62.923503544789,71.1112602642409,67.7880152737253,36.4494616450417,36.1998800315851,57.0656513849591,62.1036152823832,93.5887708027239,0,0,0,0.185803175125719,0,0,0,0.399158742865633,2.10655907145603,6.77355464716425,0,0.561594356226918,0.228234679033192,0,0,1.35433422241283,0,0,0,0,0,0,0,0,0.556812347790485,0,78.4321467580351,0.66614393599564,2.81974010175699,0,0.146508179271894,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,28.7379710816328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470940769185074,1.66211681900156,0,0,0,0,1.27149263184303,0,0,0,0,0,0,1.22206028986725,0,0,0.104421949505455,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10986352267889,0,4.46908502274835,0,0,0,0.199679000498991,0,0.223171457441873,0.403100834920358,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,4.04953004792701,2.32140586367385,0,0,0,0.367182116944987,0,0,0,0.714695326373367,0,0,0,0,0,0,0.492555124496034,0,0,0,9.27548222385549,0.387848869084652,0,0,0,0.640724475406168,2.35806457649499,0,0,0,0,0,0,0,0.306345576763462,0,0,0.886068179966986,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0.853533837553127,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0.443511850813194,0.230467975111559,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0.392616934229891,0,0.4226557275834,0,1.4097587696978,4.96325737396544,0.699588091474503,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0.829169439458779,0,0.639701945702943,0.23806443146374,0,0.31037357147929,0,0.0636471582781649,0,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.603821380773079,2.56454793842586 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,12.9810211360138,21.4944462934439,20.7453605243542,0,0,0,0,0.284338464974843,0.587200878669695,50.9675775849327,87.2368346495116,55.5547829032581,0.895661896959697,1.6194683300949,0,6.25212426752128,13.2256580291083,6.79235371325885,11.6214518452842,13.1573724166984,16.7241440283356,3.74000110018796,9.99026755463492,8.74984250587765,13.1003358679915,17.4280864567633,20.3139729891513,8.84738995850242,10.0975275521403,8.53949240891322,13.4676912643197,18.6138835704134,12.7867425159808,3.62836430205388,5.58498241340569,7.6720455095885,11.6083695451434,19.8584828641899,15.5705562248894,5.27622197039161,8.86520961314342,8.47036494349955,9.08099253950053,18.7821594353658,13.607882659958,12.6753171787165,15.5201138974482,14.0471292490612,8.53697596713363,6.90813707070929,3.85741408072992,3.70516566863623,1.59133341759272,3.10529061399878,0,1.09227722252426,0.889509253863555,0.426730222566507,1.60158394814405,1.14950487990897,0,0.954053754535364,1.1384259382189,1.76171156811282,1.14681968437569,10.5737062863221,17.3757654524276,9.2184429671277,0.393419540227666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,1.24930726552346,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.398873881556595,1.90792499444274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80805118167085,0.891786973732369,0,0,0,0,0,0,61.090241499097,41.294715552203,21.3547959006995,37.182947981576,24.9960018184232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,3.15249216323084,0.431255149719035,2.31017465303547,0,0,0,0,0,0,2.99161459204025,5.38740167466846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4700345861659,35.8085573358904,14.3014927456615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41185864310528,3.66009631434861,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.188287601553558,0,0,0,0,62.923503544789,71.1112602642409,67.7880152737253,36.4494616450417,36.1998800315851,57.0656513849591,62.1036152823832,93.5887708027239,0,0,0,0.185803175125719,0,0,0,0.399158742865633,2.10655907145603,6.77355464716425,0,0.561594356226918,0.228234679033192,0,0,1.35433422241283,0,0,0,0,0,0,0,0,0.556812347790485,0,78.4321467580351,0.66614393599564,2.81974010175699,0,0.146508179271894,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,28.7379710816328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470940769185074,1.66211681900156,0,0,0,0,1.27149263184303,0,0,0,0,0,0,1.22206028986725,0,0,0.104421949505455,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10986352267889,0,4.46908502274835,0,0,0,0.199679000498991,0,0.223171457441873,0.403100834920358,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,4.04953004792701,2.32140586367385,0,0,0,0.367182116944987,0,0,0,0.714695326373367,0,0,0,0,0,0,0.492555124496034,0,0,0,9.27548222385549,0.387848869084652,0,0,0,0.640724475406168,2.35806457649499,0,0,0,0,0,0,0,0.306345576763462,0,0,0.886068179966986,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0.853533837553127,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0.443511850813194,0.230467975111559,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0.392616934229891,0,0.4226557275834,0,1.4097587696978,4.96325737396544,0.699588091474503,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0.829169439458779,0,0.639701945702943,0.23806443146374,0,0.31037357147929,0,0.0636471582781649,0,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.603821380773079,2.56454793842586 | ||
|short_description=p3@PARVB | |short_description=p3@PARVB | ||
}} | }} |
Latest revision as of 02:16, 25 September 2015
Short description: | p3@PARVB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PARVB_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_NM_001243385_5end |
EntrezGene: | PARVB |
HGNC: | 14653 |
UniProt: | B0QYM8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.17e-87 | 98 |
blood island | 1.17e-87 | 98 |
hemolymphoid system | 8.05e-78 | 108 |
bone marrow | 6.55e-69 | 76 |
bone element | 9.75e-63 | 82 |
immune system | 7.16e-58 | 93 |
skeletal element | 8.85e-56 | 90 |
skeletal system | 1.21e-48 | 100 |
lateral plate mesoderm | 1.33e-32 | 203 |
musculoskeletal system | 5.98e-23 | 167 |
blood | 8.75e-21 | 15 |
haemolymphatic fluid | 8.75e-21 | 15 |
organism substance | 8.75e-21 | 15 |
connective tissue | 8.42e-19 | 371 |
mesoderm | 1.56e-14 | 315 |
mesoderm-derived structure | 1.56e-14 | 315 |
presumptive mesoderm | 1.56e-14 | 315 |