FFCP PHASE1:Hg19::chr4:128981999..128982013,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55132 | |EntrezGene=55132 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24704 | |HGNC=24704 | ||
|TSSclassifier=strong | |||
|UniProt=Q659C4 | |UniProt=Q659C4 | ||
|association_with_transcript=-409bp_to_ENST00000326639_5end | |||
|cluster_id=chr4:128981999..128982013,+ | |||
|description=CAGE_peak_7_at_LARP1B_5end | |||
|id=chr4:128981999..128982013,+ | |||
|ontology_enrichment_celltype=CL:0000039!6.99e-12!7;CL:0000586!6.99e-12!7;CL:0000223!6.06e-11!59;CL:0002322!1.22e-08!5;CL:0000066!1.09e-07!254;CL:0002076!7.03e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000039;5.56e-19;7!CL:0000586;5.56e-19;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.10e-19,7;CL:0000586,4.10e-19,7 | |||
|ontology_enrichment_development_v019=UBERON:0000358;6.92e-16;1!UBERON:0008801;1.78e-15;1!UBERON:0009117;1.75e-13;10!UBERON:0005564;1.75e-13;10!UBERON:0007297;2.15e-08;2 | |||
|ontology_enrichment_disease=DOID:305!2.96e-14!106;DOID:0050687!4.51e-13!143;DOID:1749!1.78e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.19e-10!12;UBERON:0004119!3.65e-09!169;UBERON:0000925!3.65e-09!169;UBERON:0006595!3.65e-09!169;UBERON:0003135!8.85e-09!11;UBERON:0001007!1.92e-07!155;UBERON:0001555!1.92e-07!155;UBERON:0007026!1.92e-07!155;UBERON:0002365!2.65e-07!31;UBERON:0002330!2.65e-07!31;UBERON:0003729!5.12e-07!5;UBERON:0001004!5.31e-07!72;UBERON:0000473!5.52e-07!8;UBERON:0001041!6.11e-07!98;UBERON:0004921!8.92e-07!129;UBERON:0004185!8.92e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;3.31e-32;11!UBERON:0006947;8.65e-20;3!UBERON:0004054;8.65e-20;3!UBERON:0000473;1.08e-16;8!UBERON:0003101;3.67e-16;22!UBERON:0000079;3.67e-16;22!UBERON:0001000;1.78e-15;1!UBERON:0001831;1.78e-15;1!UBERON:0001301;1.78e-15;1!UBERON:0005352;1.78e-15;1!UBERON:0001567;1.78e-15;1!UBERON:0005904;4.23e-15;4!UBERON:0001829;2.15e-08;2!UBERON:0004089;2.15e-08;2!UBERON:0002365;1.46e-07;31!UBERON:0002330;1.46e-07;31!UBERON:0002107;2.40e-07;19!UBERON:0006925;2.40e-07;19!UBERON:0000922;5.34e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,3.77e-32,11;UBERON:0006947,1.69e-19,3;UBERON:0004054,1.69e-19,3;UBERON:0000473,8.26e-17,8;UBERON:0003101,3.91e-16,22;UBERON:0000079,3.91e-16,22;UBERON:0001831,8.63e-16,1;UBERON:0001567,8.63e-16,1;UBERON:0008801,8.63e-16,1;UBERON:0001301,2.75e-15,1;UBERON:0001000,3.17e-15,1;UBERON:0005352,3.17e-15,1;UBERON:0005904,6.96e-15,4;UBERON:0001829,1.50e-08,2;UBERON:0004089,1.50e-08,2;UBERON:0002365,1.16e-07,31;UBERON:0002330,1.16e-07,31;UBERON:0003133,2.20e-07,48;UBERON:0002107,2.37e-07,19;UBERON:0006925,2.37e-07,19;UBERON:0008836,2.37e-07,19;UBERON:0000991,9.49e-07,21;UBERON:0009196,9.49e-07,21;UBERON:0009117,9.49e-07,21;UBERON:0005564,9.49e-07,21 | |||
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| ||
|short_description=p7@LARP1B | |||
}} | }} |
Latest revision as of 02:44, 25 September 2015
Short description: | p7@LARP1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LARP1B_5end |
Coexpression cluster: | NA |
Association with transcript: | -409bp_to_ENST00000326639_5end |
EntrezGene: | LARP1B |
HGNC: | 24704 |
UniProt: | Q659C4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.10e-19 | 7 |
germ cell | 4.10e-19 | 7 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 3.77e-32 | 11 |
male genital duct | 1.69e-19 | 3 |
internal male genitalia | 1.69e-19 | 3 |
testis | 8.26e-17 | 8 |
male organism | 3.91e-16 | 22 |
male reproductive system | 3.91e-16 | 22 |
parotid gland | 8.63e-16 | 1 |
cheek | 8.63e-16 | 1 |
parotid gland primordium | 8.63e-16 | 1 |
epididymis | 2.75e-15 | 1 |
vas deferens | 3.17e-15 | 1 |
spermatic cord | 3.17e-15 | 1 |
duct of male reproductive system | 6.96e-15 | 4 |
major salivary gland | 1.50e-08 | 2 |
midface | 1.50e-08 | 2 |
exocrine gland | 1.16e-07 | 31 |
exocrine system | 1.16e-07 | 31 |
reproductive organ | 2.20e-07 | 48 |
liver | 2.37e-07 | 19 |
digestive gland | 2.37e-07 | 19 |
liver bud | 2.37e-07 | 19 |
gonad | 9.49e-07 | 21 |
indifferent external genitalia | 9.49e-07 | 21 |
indifferent gonad | 9.49e-07 | 21 |
gonad primordium | 9.49e-07 | 21 |