FFCP PHASE1:Hg19::chr7:1126461..1126486,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2852 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4485 | |||
|TSSclassifier=strong | |||
|UniProt=Q99527,C9J3W2,Q63ZY2 | |||
|association_with_transcript=18bp_to_ENST00000397092,ENST00000413368,NM_001039966,NM_001505,uc003sjz.1,uc003ska.1_5end | |||
|cluster_id=chr7:1126461..1126486,+ | |||
|description=CAGE_peak_6_at_GPER_5end | |||
|id=chr7:1126461..1126486,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002539;3.96e-11;10!CL:0002570;9.22e-10;8!CL:0002540;3.47e-09;6!CL:0002092;2.43e-08;10!CL:0000359;3.11e-08;32!CL:0000945;1.23e-07;24!CL:0000134;2.78e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,2.06e-11,10;CL:0002570,1.41e-09,8;CL:0002540,3.92e-09,6;CL:0002092,2.62e-08,10;CL:0000359,6.15e-08,32;CL:0000945,1.29e-07,24;CL:0000826,1.29e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.20e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.96e-07!42;UBERON:0003509!1.96e-07!42;UBERON:0004572!1.96e-07!42;UBERON:0001737!4.93e-07!9;UBERON:0004573!7.54e-07!33;UBERON:0004571!7.54e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;3.96e-11;10!UBERON:0004695;3.96e-11;10!UBERON:0002111;3.96e-11;10!UBERON:0004178;3.96e-11;10!UBERON:0001135;3.44e-07;15!UBERON:0002371;6.96e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,2.06e-11,10;UBERON:0004695,2.06e-11,10;UBERON:0002111,2.06e-11,10;UBERON:0004178,2.06e-11,10;UBERON:0001135,2.27e-07,15 | |||
|phase1_expression=0,0.856402095563933,0.422863212287913,0,0,0,0,0.631719873426831,0,0,0,0.436882744260345,0.263766978228454,0.123766352960047,0,0,1.80808358407193,1.46062018077475,0,0,0.204000691244253,0,0,0,0,1.22261449196722,1.39571002064908,0.708397031823113,0,0,0.154816123316076,0,0,0,1.16200800870452,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0.619412741790207,0,0,0,0,0.645484683583826,0,0,0.545812300115692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,1.1384259382189,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0.596287222100115,0,0,0,0.838998872419812,0.825354125820202,0,0.258416759169329,0,0.33472061276467,0,1.52054421143703,0,0.367663080345869,0,0.0892997282840798,0.44905874525234,0,1.53316637465883,0,0,0,0,0,0,0,0.397227542439656,0.286836620748814,0.354668382198357,0.560677600142307,1.06748995729705,0,0,0,0.163461903113459,0,0,0,0.624320153660641,1.1409436430889,0.298897361103602,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0.515262646192195,0.257640540045629,0.558350568994769,0.506328996723799,0,0,0.552299391853796,0,0,0.201504196455281,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0.828147600278907,1.18009283054671,1.44606617930089,0.772057809126758,1.08939722046203,0.71181185733329,0.674156540800822,0.196221465125346,1.53898862778556,0,0,0,0,0,1.96565443335525,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0.288732895522148,0,0.570762456703795,2.37061319387782,4.29243081047436,0,2.34004265139238,0.891786973732369,0,0.503946384596579,0.567100388969546,0,0.290633938513962,0,0,0,0,0.144119953416961,0,0.888970520090367,3.05590740446622,0,0,0.514137463516618,1.50171528921959,0.857479297891735,0,0,0.1466765716419,1.03417372606222,0,0,0.26593811658487,0,0,0,1.0656887160644,0,0,0,0,0,0,1.50719688529793,0.871533458600294,0.499864955910285,0,0,0,0,0,1.42636905040718,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0.300946099727719,0,0,0.664225598535437,1.47495334833363,0.173767228936166,0.195801157462741,0,0,0,0,0,1.66435439510497,0,0.248107807818777,0.306923946576125,0,0.640695746278505,0.511707249066704,0.160853921143607,0,1.07946785661859,0.355123450626254,0.574890092096664,0.519254429183621,0.348631135379878,0,0,0,0,0.364182336013434,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.412164046590889,0,0.082509499920588,0,0,0,0.193341436584244,0,0.15350367472613,0,0,0.145016693914229,0,0.534192213880424,0,0,0,0,0.464845549297286,0.62962469366128,2.7881490806424,1.54016790088044,1.06461206063404,1.73986598415015,0.37064843820784,0.286249773483982,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0.636406495851874,0.78494864019923,0,0,0,1.01091240786658,0,0,0,0.243713489631284,1.05650146756755,0.136499911407986,0.141405431953713,1.13008116620243,0.551365343546124,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0,1.07001315444375,0.354761064070598,0.422215270595328,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.57409525377156,4.32807638929335,0.213425530045242,0,0,0.191505370132367,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0.284136146806413,0,0,0,0,0.703347082052564,0,0,0,0.398495976502139,0,0.503865495708552,0.102268682502155,6.89274910581989,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0.520855522170466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0.230850775511391,0,0,0,0.108647371922008,0,0.366390373607449,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.176915129006678,0,1.18608451472249,0.247127877893006,0.417687798021821,0.067401132980677,0,0,1.82454789215666,0,0.242780379534093,0,0,0,0.252746318513952,1.50323419414493,0,0,0,0,0,0.284609546029793,0.554698692052555,0.347119476670262,0.0979923974143777,0.34823682632161,0,0.171986032471617,0.19351266257817,0.0730893170861856,0.410577285266046,0.193978032976839,0.441280633457501,1.80784592624426,0.137041924646751,0.19871461170299,0,0.195551382734803,0,0,0.39961921916426,0.288180834308212,0,0,0.432164393964449,0.372757606696298,0.235694034616795,0.815425236441684,0,0,0,0,0.136905378891993,0,0,0.788662062837943,0,0,0,0.199679000498991,0.858452096273142,0.223171457441873,0.268733889946905,0,0,0.630265458457789,0.576911008668165,0.808842526250219,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0.394028536495991,0.262272940674991,0.528001682597033,0,0.191915197319445,0,0,0,0.542999601753713,0,0.653174720218818,0,0,0.681552087141687,0.113312091520126,0.146552233678082,0,0.387848869084652,0.26446520348538,0,0.704815022316672,1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| |||
|short_description=p6@GPER | |||
}} |
Latest revision as of 05:30, 25 September 2015
Short description: | p6@GPER |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GPER_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_ENST00000397092, ENST00000413368, NM_001039966, NM_001505, uc003sjz.1, uc003ska.1_5end |
EntrezGene: | GPER |
HGNC: | 4485 |
UniProt: | Q99527C9J3W2Q63ZY2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 2.06e-11 | 10 |
mesenchymal stem cell of adipose | 1.41e-09 | 8 |
mesenchymal stem cell of the bone marrow | 3.92e-09 | 6 |
bone marrow cell | 2.62e-08 | 10 |
vascular associated smooth muscle cell | 6.15e-08 | 32 |
lymphocyte of B lineage | 1.29e-07 | 24 |
pro-B cell | 1.29e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 2.06e-11 | 10 |
arterial system smooth muscle | 2.06e-11 | 10 |
artery smooth muscle tissue | 2.06e-11 | 10 |
aorta smooth muscle tissue | 2.06e-11 | 10 |
smooth muscle tissue | 2.27e-07 | 15 |