FFCP PHASE1:Hg19::chr20:32990563..32990582,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:32990563..32990582,- to FFCP PHASE1:Hg19::chr20:32990563..32990582,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=16339 | |HGNC=16339 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-61bp_to_ENST00000456658_5end | |||
|cluster_id=chr20:32990563..32990582,- | |||
|coexpression_cluster_id=C364 | |||
|description=CAGE_peak_1_at_CDC42P1_5end | |||
|id=chr20:32990563..32990582,- | |||
|ontology_enrichment_celltype=CL:0002057!1.80e-25!42;CL:0000860!1.73e-22!45;CL:0000766!6.54e-18!76;CL:0000839!7.46e-18!70;CL:0000557!2.87e-17!71;CL:0000738!7.83e-17!140;CL:0000763!9.95e-17!112;CL:0000049!9.95e-17!112;CL:0002009!3.61e-16!65;CL:0002031!1.03e-15!124;CL:0002032!2.78e-15!165;CL:0000837!2.78e-15!165;CL:0000037!3.91e-15!172;CL:0000566!3.91e-15!172;CL:0002194!5.30e-15!63;CL:0000576!5.30e-15!63;CL:0000040!5.30e-15!63;CL:0000559!5.30e-15!63;CL:0000988!2.14e-13!182;CL:0002087!3.45e-11!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.01e-55;33!CL:0002057;6.01e-55;33!CL:0000473;3.32e-40;39!CL:0000234;3.32e-40;39!CL:0000576;1.42e-35;48!CL:0000766;3.61e-24;69!CL:0000763;4.92e-11;100!CL:0000738;5.69e-10;136!CL:0002087;1.54e-09;104!CL:0000453;1.92e-08;5!CL:0002166;2.28e-07;3!CL:0000875;3.55e-07;3!CL:0002396;3.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.90e-67,42;CL:0002057,1.90e-67,42;CL:0000473,5.55e-61,48;CL:0000234,5.55e-61,48;CL:0000839,3.36e-50,66;CL:0000766,7.09e-50,72;CL:0002009,2.25e-47,61;CL:0000557,5.88e-47,67;CL:0002194,2.32e-46,59;CL:0000576,2.32e-46,59;CL:0000040,2.32e-46,59;CL:0000559,2.32e-46,59;CL:0000763,6.63e-42,108;CL:0000049,6.63e-42,108;CL:0000738,2.00e-33,136;CL:0002031,5.05e-31,120;CL:0002032,8.17e-30,161;CL:0000837,8.17e-30,161;CL:0000037,6.39e-28,168;CL:0000988,1.04e-25,177;CL:0002087,4.39e-25,115;CL:0000134,8.92e-10,354;CL:0002320,2.75e-09,361;CL:0002393,1.74e-08,9;CL:0002397,1.74e-08,9;CL:0000453,1.80e-08,5;CL:0002166,1.20e-07,3;CL:0000219,1.36e-07,386;CL:0000048,2.00e-07,427;CL:0000875,2.96e-07,3;CL:0002396,2.96e-07,3;CL:0000723,4.17e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.82e-47;42!CL:0000049;3.29e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.08e-15!80;UBERON:0001474!1.38e-13!86;UBERON:0004765!1.88e-11!101;UBERON:0001434!1.88e-11!101;UBERON:0002390!1.45e-10!102;UBERON:0003061!1.45e-10!102;UBERON:0002193!1.65e-09!112;UBERON:0002405!2.78e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.65e-40,76;UBERON:0004765,8.53e-38,90;UBERON:0001474,3.60e-36,82;UBERON:0001434,9.90e-33,100;UBERON:0002405,1.80e-30,93;UBERON:0002390,2.62e-28,98;UBERON:0003061,2.62e-28,98;UBERON:0002193,1.38e-24,108;UBERON:0002204,1.31e-17,167;UBERON:0003081,1.18e-10,203;UBERON:0002384,1.26e-08,371 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,2.41077811209591,2.92124036154949,0.975865597581014,0.246242116153576,0,0,0,0.136874425072884,0.125542639594803,0.229240217243854,0,0.157421562627358,1.18009283054671,0.767658796194425,1.70297735647684,0,0,0,0.232401601740905,0.142169232487422,0.293600439334847,0,0,0,0,0.647787332037959,0,1.74477886535478,1.13362783106643,3.15359279544161,3.0215774797739,1.6446715520873,4.02618282163635,1.43846196161075,1.0246428261164,3.07426898855161,1.37898272294647,3.22742341791913,2.70852973188684,1.50593871634084,3.27487380069415,2.24723484445085,2.75475503133812,3.20929027076094,1.91801137739712,1.31940520074686,1.79517291859469,1.27867425159808,1.7412554317715,1.70215567407342,3.11411124497787,3.26623264833766,1.0429658368404,3.69221035998698,0,2.94622108790052,1.89877432464531,3.80259515361495,1.27562579979026,2.51590374610051,1.68492946719743,1.50176892841506,3.53596290733576,1.71007646244749,1.19350006319454,3.28795476776341,0,1.09227722252426,0,0,0.800791974072025,0.574752439954483,0.661044872784862,0,0.569212969109448,0,0,0,0.560508562981536,0.526768169550154,0.196709770113833,0,0,2.00623794468814,1.30368906653436,0.473447805734733,0,1.6711568532776,0.589211814949674,1.10766947291811,2.43723477388514,0.768547918354051,1.1705341280389,0.657751618414705,0,2.02862160014537,1.33457906845854,1.07016331235885,1.04535523804977,2.03956816855619,0,0,2.53019692019503,0.318565414324097,1.95325036156926,0,2.40920190524436,3.71161172347813,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,1.40648818027883,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0,0,0.370784442784429,0,0.522389211897802,0,0.238490624305342,0.571994910780128,0.74291500265913,0.39752481473341,0,0.347140501607594,0,0.419499436209906,0.550236083880135,0,0,0,0,0,0.760272105718513,0,0,0,0.17859945656816,0,0,1.53316637465883,0.949265659568129,0,0,3.87780264148325,0,0,0.12663051166458,0.662045904066094,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0.358779271377724,0.213557388818567,0,0,0,0.515281080091258,0,0.337552664482532,0.0974370051611986,0,0,1.61646056818812,0,0.201504196455281,0,0.386521706326594,0,0,0,0,0.232387885739037,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0.828147600278907,0.505754070234305,0.482022059766964,0.330881918197182,1.08939722046203,0.71181185733329,0.269662616320329,0.392442930250692,1.15424147083917,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0.0925884451585296,0,0,0,1.04337364477569,1.17408694235822,0.288732895522148,0.462985512576611,0.761016608938393,0,0,0,0,0,1.87467667973554,2.35174979478403,2.83550194484773,0,0,0,0,1.23267807618516,2.07328115540772,0.864719720501769,0.88369703398466,0.63497894292169,0,0,0,0,0.600686115687835,0.857479297891735,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0.845302752556,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0.637938751653163,1.49801404789436,0,0,0,0,0,0.831883446123229,0.713715955188647,1.10391690523754,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,1.07423381301644,0,0,0.511707249066704,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75407901316748,1.8300481571743,0,0,0,0,0,0.082509499920588,0,0.650060246036521,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0.330569830721956,0,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.573645408816206,0.392996164052485,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0,0,0,0,0.245040215981032,0,0,0,0.318852545457645,0,0.5745161103971,0,0.973865820823666,0.561594356226918,0,0,0,1.18504244461122,0,0,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0.540911356951966,0,0,0,0.293016358543788,0,0,0,0.71623345421307,0.593929361665277,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0.123084805461069,0.311039587661807,0,0.358042349351218,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,1.77148277162768,0,1.52581736317083,0,0.295547618953547,0,0.10893846351899,0.278847488557207,0.0769502585037971,0.113942055847001,0,0.179515288819544,0,0.638002319463839,0.824378340616761,0,0,0,0,0,0,0.167821586975843,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.277349346026277,0,0.195984794828755,0,0,0,0,0,0,0,0.0882561266915003,0,0.137041924646751,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0.171594997861965,0.14405479798815,0,0,0,0.209205692624666,0.101998217636322,0,1.20084057741958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| ||
|short_description=p1@CDC42P1 | |||
}} | }} |
Latest revision as of 06:48, 25 September 2015
Short description: | p1@CDC42P1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDC42P1_5end |
Coexpression cluster: | C364_CD14_immature_CD14CD16_Aortic_CD4_Reticulocytes_Basophils |
Association with transcript: | -61bp_to_ENST00000456658_5end |
EntrezGene: | NA |
HGNC: | 16339 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.65e-40 | 76 |
skeletal element | 8.53e-38 | 90 |
bone element | 3.60e-36 | 82 |
skeletal system | 9.90e-33 | 100 |
immune system | 1.80e-30 | 93 |
hematopoietic system | 2.62e-28 | 98 |
blood island | 2.62e-28 | 98 |
hemolymphoid system | 1.38e-24 | 108 |
musculoskeletal system | 1.31e-17 | 167 |
lateral plate mesoderm | 1.18e-10 | 203 |
connective tissue | 1.26e-08 | 371 |