FFCP PHASE1:Hg19::chr1:221054853..221054873,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3142 | |EntrezGene=3142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4978 | |HGNC=4978 | ||
|TSSclassifier=strong | |||
|UniProt=F8VVX3 | |UniProt=F8VVX3 | ||
|association_with_transcript=269bp_to_ENST00000549319_5end | |association_with_transcript=269bp_to_ENST00000549319_5end | ||
|cluster_id=chr1:221054853..221054873,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_9_at_HLX_5end | |description=CAGE_peak_9_at_HLX_5end | ||
|id=chr1:221054853..221054873,+ | |id=chr1:221054853..221054873,+ | ||
|ontology_enrichment_celltype=CL:0002057!8.80e-30!42;CL:0002194!2.10e-29!63;CL:0000576!2.10e-29!63;CL:0000040!2.10e-29!63;CL:0000559!2.10e-29!63;CL:0002009!3.49e-29!65;CL:0000766!1.08e-27!76;CL:0000860!1.08e-26!45;CL:0000557!3.26e-26!71;CL:0000839!1.12e-25!70;CL:0000763!2.66e-24!112;CL:0000049!2.66e-24!112;CL:0000048!5.05e-17!430;CL:0000723!3.99e-16!436;CL:0000034!8.29e-16!444;CL:0002320!3.49e-11!365;CL:0000134!6.76e-11!358;CL:0000738!1.25e-10!140;CL:0000037!2.47e-10!172;CL:0000566!2.47e-10!172;CL:0002032!2.77e-10!165;CL:0000837!2.77e-10!165;CL:0002087!2.41e-09!119;CL:0000988!1.18e-08!182;CL:0002031!1.57e-08!124;CL:0000187!2.25e-08!54;CL:0000219!5.87e-08!390;CL:0000680!1.86e-07!57;CL:0000056!1.86e-07!57;CL:0000355!1.86e-07!57;CL:0000183!6.60e-07!59;CL:0002539!7.49e-07!10 | |ontology_enrichment_celltype=CL:0002057!8.80e-30!42;CL:0002194!2.10e-29!63;CL:0000576!2.10e-29!63;CL:0000040!2.10e-29!63;CL:0000559!2.10e-29!63;CL:0002009!3.49e-29!65;CL:0000766!1.08e-27!76;CL:0000860!1.08e-26!45;CL:0000557!3.26e-26!71;CL:0000839!1.12e-25!70;CL:0000763!2.66e-24!112;CL:0000049!2.66e-24!112;CL:0000048!5.05e-17!430;CL:0000723!3.99e-16!436;CL:0000034!8.29e-16!444;CL:0002320!3.49e-11!365;CL:0000134!6.76e-11!358;CL:0000738!1.25e-10!140;CL:0000037!2.47e-10!172;CL:0000566!2.47e-10!172;CL:0002032!2.77e-10!165;CL:0000837!2.77e-10!165;CL:0002087!2.41e-09!119;CL:0000988!1.18e-08!182;CL:0002031!1.57e-08!124;CL:0000187!2.25e-08!54;CL:0000219!5.87e-08!390;CL:0000680!1.86e-07!57;CL:0000056!1.86e-07!57;CL:0000355!1.86e-07!57;CL:0000183!6.60e-07!59;CL:0002539!7.49e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.18e-65;33!CL:0002057;9.18e-65;33!CL:0000473;5.08e-46;39!CL:0000234;5.08e-46;39!CL:0000576;3.15e-36;48!CL:0000766;2.96e-19;69!CL:0000763;4.01e-11;100!CL:0002087;3.00e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.16e-58,42;CL:0002057,1.16e-58,42;CL:0000473,1.13e-53,48;CL:0000234,1.13e-53,48;CL:0002194,1.53e-52,59;CL:0000576,1.53e-52,59;CL:0000040,1.53e-52,59;CL:0000559,1.53e-52,59;CL:0002009,1.65e-50,61;CL:0000839,5.85e-46,66;CL:0000557,3.95e-45,67;CL:0000766,2.51e-41,72;CL:0000763,9.54e-33,108;CL:0000049,9.54e-33,108;CL:0002087,3.10e-22,115;CL:0002031,6.59e-21,120;CL:0000738,9.13e-20,136;CL:0002032,2.13e-18,161;CL:0000837,2.13e-18,161;CL:0000037,3.45e-17,168;CL:0000988,8.88e-16,177;CL:0000048,1.15e-13,427;CL:0000723,2.91e-13,433;CL:0000034,9.69e-13,441;CL:0002320,1.20e-11,361;CL:0000134,1.76e-11,354;CL:0000219,2.66e-09,386 | |||
|ontology_enrichment_development_v019=CL:0002057;9.05e-41;42!CL:0000049;5.66e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.54e-24!102;UBERON:0003061!1.54e-24!102;UBERON:0002371!4.62e-24!80;UBERON:0002193!5.86e-23!112;UBERON:0002204!4.76e-22!167;UBERON:0001474!5.91e-21!86;UBERON:0003081!7.28e-19!216;UBERON:0002405!1.07e-16!115;UBERON:0004765!5.78e-15!101;UBERON:0001434!5.78e-15!101;UBERON:0002384!2.12e-10!375;UBERON:0000926!1.08e-08!448;UBERON:0004120!1.08e-08!448;UBERON:0006603!1.08e-08!448;UBERON:0001135!2.96e-08!15;UBERON:0004237!7.49e-07!10;UBERON:0004695!7.49e-07!10;UBERON:0002111!7.49e-07!10;UBERON:0004178!7.49e-07!10 | |ontology_enrichment_uberon=UBERON:0002390!1.54e-24!102;UBERON:0003061!1.54e-24!102;UBERON:0002371!4.62e-24!80;UBERON:0002193!5.86e-23!112;UBERON:0002204!4.76e-22!167;UBERON:0001474!5.91e-21!86;UBERON:0003081!7.28e-19!216;UBERON:0002405!1.07e-16!115;UBERON:0004765!5.78e-15!101;UBERON:0001434!5.78e-15!101;UBERON:0002384!2.12e-10!375;UBERON:0000926!1.08e-08!448;UBERON:0004120!1.08e-08!448;UBERON:0006603!1.08e-08!448;UBERON:0001135!2.96e-08!15;UBERON:0004237!7.49e-07!10;UBERON:0004695!7.49e-07!10;UBERON:0002111!7.49e-07!10;UBERON:0004178!7.49e-07!10 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.22e-38,76;UBERON:0002390,2.16e-37,98;UBERON:0003061,2.16e-37,98;UBERON:0001474,4.22e-35,82;UBERON:0002193,9.46e-35,108;UBERON:0004765,5.73e-33,90;UBERON:0002405,1.17e-31,93;UBERON:0001434,1.13e-28,100;UBERON:0002204,1.79e-27,167;UBERON:0003081,9.46e-23,203;UBERON:0000926,1.35e-14,315;UBERON:0004120,1.35e-14,315;UBERON:0006603,1.35e-14,315;UBERON:0002384,5.79e-11,371 | |||
|phase1_expression=0,0,0.704772020479856,0,0,1.74467704820074,0,0.631719873426831,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,1.46062018077475,0.975865597581014,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0,0,0.587200878669695,1.66198622559563,0.401088894940283,0.217010870715852,0.671746422719773,0.32389366601898,0.257575567634187,1.16318591023652,1.88937971844405,0.242584061187816,3.48643555358527,4.52284676824008,1.85823822537062,9.20615655430881,5.12321413058201,7.80391358632331,4.82643953031266,3.87290810150296,0,0.941211697713023,2.18324920046277,1.79778787556068,6.42776173978895,6.09765151444578,7.03270838378945,4.61791820261403,6.38283704389222,3.83602275479425,9.57690487474327,10.2129340444405,4.9825779919646,10.3011952755265,10.9511412868242,8.90474263290978,15.1349875658342,13.9945501675275,7.59509729858123,0.211255286311942,0.212604299965044,0.209658645508376,1.68492946719743,1.65194582125657,1.12507910687956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.434539556882471,0,0,0,0,0,0.0654895377488563,0,0,0.649094787309367,1.0447784237956,0.930705723632056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.993943903390637,0,0.264818361626438,0,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0,0,1.17160715916898,0,0,0.149448680551801,0.117434498643765,0,0,0.408308342509787,0,0.103325781175765,0,0,0.910161361938026,1.43723628363248,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0.618315175430633,0,0,0,0,0.757301322732344,0.368199594569197,0.80823028409406,0,0.201504196455281,0,0,0,0,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,2.057870056657,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0.977424915930974,3.11980435583874,0,0,0,0,0,0,0,0,0,0.936017060556951,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0.531876233169741,2.08014873822732,0.514414748524284,0,0,0.714889968290738,1.62786481617433,0.823240336780769,0.325736184293735,1.06617584622764,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0.12269149171914,1.00034104211935,0.271265023699736,0.207970861530807,0.178428988797162,0,0,0,2.27407504055985,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,1.48418066444991,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0.459257792658427,0,0.262248829918848,0,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0.386682873168488,1.23238893691716,1.22802939780904,0,0.429680979473094,0.725083469571143,0.511359764496605,0.445160178233687,0,0,0,0,1.85938219718914,0.94443704049192,0.6970372701606,0.616067160352178,0,0.869932992075073,0,0,0,0,1.33441135746677,0,2.1396949401696,1.59101623962968,0,0.899362287916574,2.19629623788844,0.471249609382746,0,0,0,0.48763373908959,0.243713489631284,1.05650146756755,0.409499734223957,0.282810863907425,3.39024349860728,0.551365343546124,0,0,0.578775534266688,0,0,0,0,0.143411352204052,0.392996164052485,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0.564862804660675,0,0,0,0,0.507447609232169,1.52927441428475,0.569647187174163,0.238231775457789,1.23408681925858,2.59389324477087,1.08006287447623,3.17250070517708,0,0,0,0,0,0,0,0,0,0,0.649243880549111,0,0.684704037099577,0.313359791546046,0,0.169291777801603,2.24823305145179,1.41259795033733,0.425846237690326,0,1.53620382154229,1.56573275524691,2.16903884225481,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0.988823245360557,0,0.398495976502139,0,0,0,0,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.134366944973453,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.640724475406168,0.314408610199332,0.828478110694391,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0,0.573409195690071,0.110929051536852,0,0.138348634936231,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,2.74608082076308,0.756154618816195,0.621748802331122,1.03498604992744,0.477890301491107,0.449803112163605,0.310525913752519,0,0,0.521745061811734,1.05180326298053,0.761610424337591,0,0,0.859284456339908,0,0,0,0,0.673498977531838,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0,0.219284049578707,0.176689145945881,0,0.337884881306145,0,0,0,0,1.7537427795545,0.930053882193542,1.14495775979091,0,0,0,0,2.24052632357696,0.172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| ||
|short_description=p9@HLX | |short_description=p9@HLX | ||
}} | }} |
Latest revision as of 07:07, 25 September 2015
Short description: | p9@HLX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HLX_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 269bp_to_ENST00000549319_5end |
EntrezGene: | HLX |
HGNC: | 4978 |
UniProt: | F8VVX3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.16e-58 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.16e-58 | 42 |
defensive cell | 1.13e-53 | 48 |
phagocyte | 1.13e-53 | 48 |
monopoietic cell | 1.53e-52 | 59 |
monocyte | 1.53e-52 | 59 |
monoblast | 1.53e-52 | 59 |
promonocyte | 1.53e-52 | 59 |
macrophage dendritic cell progenitor | 1.65e-50 | 61 |
myeloid lineage restricted progenitor cell | 5.85e-46 | 66 |
granulocyte monocyte progenitor cell | 3.95e-45 | 67 |
myeloid leukocyte | 2.51e-41 | 72 |
myeloid cell | 9.54e-33 | 108 |
common myeloid progenitor | 9.54e-33 | 108 |
nongranular leukocyte | 3.10e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 6.59e-21 | 120 |
leukocyte | 9.13e-20 | 136 |
hematopoietic oligopotent progenitor cell | 2.13e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.13e-18 | 161 |
hematopoietic stem cell | 3.45e-17 | 168 |
hematopoietic cell | 8.88e-16 | 177 |
multi fate stem cell | 1.15e-13 | 427 |
somatic stem cell | 2.91e-13 | 433 |
stem cell | 9.69e-13 | 441 |
connective tissue cell | 1.20e-11 | 361 |
mesenchymal cell | 1.76e-11 | 354 |
motile cell | 2.66e-09 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.22e-38 | 76 |
hematopoietic system | 2.16e-37 | 98 |
blood island | 2.16e-37 | 98 |
bone element | 4.22e-35 | 82 |
hemolymphoid system | 9.46e-35 | 108 |
skeletal element | 5.73e-33 | 90 |
immune system | 1.17e-31 | 93 |
skeletal system | 1.13e-28 | 100 |
musculoskeletal system | 1.79e-27 | 167 |
lateral plate mesoderm | 9.46e-23 | 203 |
mesoderm | 1.35e-14 | 315 |
mesoderm-derived structure | 1.35e-14 | 315 |
presumptive mesoderm | 1.35e-14 | 315 |
connective tissue | 5.79e-11 | 371 |