FFCP PHASE1:Mm9::chr10:109340967..109340983,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:109340967..109340983,-
|short_description=p4@Nav3
|description=CAGE_peak_4_at_Nav3_5end
|association_with_transcript=-35bp_to_ENSMUST00000160159_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=260315 | |EntrezGene=260315 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1861 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-35bp_to_ENSMUST00000160159_5end | |||
|cluster_id=chr10:109340967..109340983,- | |||
|description=CAGE_peak_4_at_Nav3_5end | |||
|id=chr10:109340967..109340983,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.09e-14,3;CL:0000359,1.09e-14,3;CL:0002539,1.09e-14,3;CL:0000514,1.09e-14,3;CL:0000680,7.28e-13,6;CL:0000187,7.28e-13,6;CL:0000056,7.28e-13,6;CL:0000217,3.81e-11,2;CL:0000328,3.81e-11,2;CL:0002573,3.81e-11,2;CL:0002376,3.81e-11,2;CL:0000218,3.81e-11,2;CL:0000692,3.81e-11,2;CL:0002377,3.81e-11,2;CL:0002375,3.81e-11,2;CL:0000222,4.71e-11,7;CL:0000355,1.25e-08,9;CL:0000215,1.05e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.09e-14,3;UBERON:0004237,1.09e-14,3;UBERON:0004695,1.09e-14,3;UBERON:0002111,1.09e-14,3;UBERON:0004178,1.09e-14,3;UBERON:0005795,1.97e-11,4;UBERON:0000995,1.97e-11,4;UBERON:0000947,3.74e-11,4;UBERON:0001637,3.74e-11,4;UBERON:0004573,3.74e-11,4;UBERON:0003509,3.74e-11,4;UBERON:0004571,3.74e-11,4;UBERON:0010191,3.74e-11,4;UBERON:0004572,3.74e-11,4;UBERON:0001987,1.60e-10,2;UBERON:0003124,1.60e-10,2;UBERON:0004340,1.60e-10,2;UBERON:0003975,3.03e-09,5;UBERON:0000055,5.05e-09,5;UBERON:0007500,5.05e-09,5;UBERON:0001981,5.05e-09,5;UBERON:0002049,5.05e-09,5;UBERON:0007798,5.05e-09,5;UBERON:0004537,5.05e-09,5;UBERON:0006965,5.05e-09,5;UBERON:0001134,1.25e-08,9;UBERON:0002036,1.25e-08,9;UBERON:0002385,1.25e-08,9;UBERON:0000486,1.25e-08,9;UBERON:0007503,1.25e-08,9;UBERON:0001015,1.25e-08,9;UBERON:0002329,1.25e-08,9;UBERON:0003082,1.25e-08,9;UBERON:0003059,1.25e-08,9;UBERON:0007282,1.25e-08,9;UBERON:0004290,1.25e-08,9;UBERON:0009618,1.25e-08,9;UBERON:0000383,8.85e-08,10;UBERON:0005631,2.72e-07,3;UBERON:0000478,2.72e-07,3;UBERON:0000158,2.72e-07,3;UBERON:0007524,4.41e-07,11;UBERON:0003077,4.41e-07,11;UBERON:0007285,4.41e-07,11 | |||
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| ||
|short_description=p4@Nav3 | |||
}} | }} |
Latest revision as of 14:14, 25 September 2015
Short description: | p4@Nav3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Nav3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1861 |
Association with transcript: | -35bp_to_ENSMUST00000160159_5end |
EntrezGene: | Nav3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.09e-14 | 3 |
vascular associated smooth muscle cell | 1.09e-14 | 3 |
aortic smooth muscle cell | 1.09e-14 | 3 |
smooth muscle myoblast | 1.09e-14 | 3 |
muscle precursor cell | 7.28e-13 | 6 |
muscle cell | 7.28e-13 | 6 |
myoblast | 7.28e-13 | 6 |
insulating cell | 3.81e-11 | 2 |
myelin accumulating cell | 3.81e-11 | 2 |
Schwann cell | 3.81e-11 | 2 |
non-myelinating Schwann cell | 3.81e-11 | 2 |
myelinating Schwann cell;;Schwann cell | 3.81e-11 | 2 |
terminal Schwann cell | 3.81e-11 | 2 |
immature Schwann cell | 3.81e-11 | 2 |
Schwann cell precursor | 3.81e-11 | 2 |
mesodermal cell | 4.71e-11 | 7 |
multi-potent skeletal muscle stem cell | 1.25e-08 | 9 |
barrier cell | 1.05e-07 | 3 |