Personal tools

FFCP PHASE1:Mm9::chr5:148241866..148241878,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=72587
|EntrezGene=72587
|HGNC=
|HGNC=
|MCL_coexpression_id=382
|MCL_coexpression_id=382
|TSSclassifier=NA
|UniProt=Q640Q5,F8VPL8
|UniProt=Q640Q5,F8VPL8
|association_with_transcript=-277bp_to_ENSMUST00000031651,ENSMUST00000085571,NM_028291,uc009aod.2_5end
|association_with_transcript=-277bp_to_ENSMUST00000031651,ENSMUST00000085571,NM_028291,uc009aod.2_5end
|cluster_id=chr5:148241866..148241878,+
|description=CAGE_peak_4_at_Pan3_5end
|description=CAGE_peak_4_at_Pan3_5end
|id=chr5:148241866..148241878,+
|id=chr5:148241866..148241878,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000838,8.20e-19,12;CL:0000988,4.88e-18,32;CL:0002032,4.88e-18,32;CL:0000037,4.88e-18,32;CL:0000837,4.88e-18,32;CL:0000542,3.27e-17,13;CL:0000051,3.27e-17,13;CL:0000084,6.66e-17,11;CL:0000827,6.66e-17,11;CL:0002320,1.68e-14,46;CL:0000134,1.68e-14,46;CL:0000738,1.07e-12,17;CL:0002087,1.07e-12,17;CL:0000791,3.25e-12,9;CL:0000789,3.25e-12,9;CL:0002420,3.25e-12,9;CL:0002419,3.25e-12,9;CL:0000790,3.25e-12,9;CL:0000219,1.02e-11,54;CL:0002031,1.39e-11,25;CL:0000624,2.79e-10,8;CL:0000034,3.11e-07,97
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003408!9.98e-08!24;UBERON:0002370!2.04e-07!23;UBERON:0000974!2.04e-07!23;UBERON:0004807!2.04e-07!23;UBERON:0005058!2.04e-07!23;UBERON:0003351!2.04e-07!23;UBERON:0009113!2.04e-07!23;UBERON:0003295!2.04e-07!23;UBERON:0009722!2.04e-07!23;UBERON:0005562!2.04e-07!23;UBERON:0007690!2.04e-07!23;UBERON:0004177!5.70e-07!29
|ontology_enrichment_uberon=UBERON:0003408!9.98e-08!24;UBERON:0002370!2.04e-07!23;UBERON:0000974!2.04e-07!23;UBERON:0004807!2.04e-07!23;UBERON:0005058!2.04e-07!23;UBERON:0003351!2.04e-07!23;UBERON:0009113!2.04e-07!23;UBERON:0003295!2.04e-07!23;UBERON:0009722!2.04e-07!23;UBERON:0005562!2.04e-07!23;UBERON:0007690!2.04e-07!23;UBERON:0004177!5.70e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.70e-22,23;UBERON:0000974,2.70e-22,23;UBERON:0004807,2.70e-22,23;UBERON:0005058,2.70e-22,23;UBERON:0003351,2.70e-22,23;UBERON:0009113,2.70e-22,23;UBERON:0003295,2.70e-22,23;UBERON:0009722,2.70e-22,23;UBERON:0005562,2.70e-22,23;UBERON:0007690,2.70e-22,23;UBERON:0006562,3.23e-21,24;UBERON:0003408,3.23e-21,24;UBERON:0001557,3.23e-21,24;UBERON:0001042,3.23e-21,24;UBERON:0008814,3.23e-21,24;UBERON:0009145,3.23e-21,24;UBERON:0000072,1.83e-18,27;UBERON:0004177,6.05e-17,29;UBERON:0005057,6.05e-17,29;UBERON:0002390,6.32e-16,45;UBERON:0003061,6.32e-16,45;UBERON:0000077,2.50e-15,35;UBERON:0007811,8.89e-15,36;UBERON:0002193,1.19e-14,48;UBERON:0002405,1.19e-14,48;UBERON:0002384,1.68e-14,46;UBERON:0003929,3.53e-12,55;UBERON:0000153,9.16e-12,43;UBERON:0000065,5.82e-11,41;UBERON:0002368,8.44e-11,60;UBERON:0001004,1.28e-10,42;UBERON:0002530,1.23e-09,65;UBERON:0000490,2.00e-09,66;UBERON:0005911,7.87e-09,69;UBERON:0000949,2.76e-08,72;UBERON:0001041,4.87e-07,80;UBERON:0003081,5.38e-07,87
|phase1_expression=0.480446541314382,0,0,0.60492842261366,0,0.503637815735669,0.700837921786577,1.93684985162364,1.68946466582,2.34064526321993,0.34243593645101,0.159544317990673,1.54080656938085,1.92324885321794,1.33243904726265,0.404950534779652,0,2.20823515750766,0.959801035240171,0.42438965179803,0.425216450755349,6.85107563286109,5.22399578277871,0.319984845586813,0,0.57423196411502,0.430761996159075,0.430942465371778,0.380046838912748,0,0.221730510655305,0,0.61506478758457,0,0.288851619751275,0.664938581433969,0.816677425049476,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0.485510353031154,0,0.304130793658544,0,0,0.218025156380447,0,0.194429899074283,0.279972843250725,0,1.51004345451963,3.62681071005672,2.01656279485478,0.257259436035947,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244981598429908,0.479227355091182,0,0,0.383062014255563,0,0.395658863190582,0.365950574409639,0,0,0,0,0,0.142371680799103,0.745597783301202,0.075726193333184,0.151143120213571,1.44932244350839,0,1.3599426674155,0.539703191637817,0.649776417447669,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0.517875767294343,0,0.520455980298408,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0.741584903203122,0.144599356919912,0.884610551949874,0,0.220841518460394,0,0,0.292780797011547,0.83778682725382,0.255457055208591,3.59445373517761,2.99951365496704,2.79554499560742,0,0,0.125654352112864,0.347648640384553,0,0,0,0.305518091550949,0.746441823660558,0,0.210441855886474,0.650602214813519,0.459804208866946,0.540186389416048,0.30140963567143,0.476255494059295,0.384341160854549,1.40552586839593,0,0.862271971731369,0.567318240503458,0.351902248327898,0.43839146485515,0.278047249225598,0,0.205782136407943,0.398068533636986,1.40442637462647,1.28673953557358,0.284163499395593,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.983821158737019,0,0.465067889500816,0.536546802799238,0.116765342367169,0.329119699826961,0.32833492815819,0.0810688095458557,0,0.219550115291051,0,0,0.205809224758569,0.330418782983798,0.264450566663544,0.426576501070468,0.464473343720877,0.38660238396628,0.80673409849337,0.22237804384487,0.190225626112559,0.474529061544512,0,0.754005626400808,0,0.19496408711912,0,0.432276099749388,0,0.569003702859245,0.685491075658373,0,0.407302655690628,0.193952487167626,0.210407459670956,0.126473074248515,0.442830443938806,0,0.123397163921801,0,0.333690211432188,0.786235980452812,0.224862112384854,1.01430060694251,0.72353147925725,0,0,0.324270453550071,0,1.43768206527355,0.372140947668503,0,0,0,0.482443521363367,0.184753190166605,0,0.651859905768103,0.678980343100753,0.704070744865506,0.167506257441816,0.952174563544055,0.390267295715598,0.630540576424764,0,0.318909537314974,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0.163934945376675,0.504941854408746,0.315508219416257,0,0.430846795465598,0.477937595905104,0.222798674082394,0,0,0.584511715822624,0.395287777946524,0.321321316421807,1.70328102249922,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0.565815239267694,0,0.307435147943927,0,0,0.712994756769443,0,0,0,0,0,0.129358683782755,0.214337035031592,0.532020700926821,0.178368817602071,0,0.304464949114599,0,0.63549621259146,0,0,0.161464426695906,0.301564624640779,0.596861720015682,0.492422699235184,0,0.741701208042039,0,0.412773735926445,0.370389054739423,0.376736914009382,0.683471138605126,0.228778173206523,4.9293744698218,4.05859211738608,5.52799895217695,0,0.158167996790568,0.406638934253697,0.216010681643603,0,0.218362563746178,0.134864346384821,0.247960367176008,0.26175594198403,0.259229946583586,0.621339313086926,0,0.747582730219894,0,0.194451188344048,0.129159823477731,0.337912250981556,0.352071715937262,0.781226309063701,0.943734099831398,0.483168241652012,0.576060012515731,5.68820017130721,0.405450430580328,0.308132871494482,0.77952493786677,2.68540043501222,4.37098980518783,3.24527713703916,3.2491695978407,5.04832249740738,5.86792411243499,6.85618058930516,4.77543615624787,4.9068039236568,5.14258369598903,0,0.665957860122194,0.269141569828427,0.335769232728157,0.386379188064381,0.375364950902364,0.36630324853453,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.31136204275253,0.399024873401031,0.512200817262403,0.243106717068294,0,0.183843508450014,0.44449345560323,0.824140228955577,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0.384150914429216,0.402048282689293,0.476293691283074,0,0,0,0.441596760403192,0,0,0,0,0.282328141245992,0,0.365855945745545,0,0.271608227691724,0,0.474540072496697,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0.644613162144895,0.191288332068843,0,0
|phase1_expression=0.480446541314382,0,0,0.60492842261366,0,0.503637815735669,0.700837921786577,1.93684985162364,1.68946466582,2.34064526321993,0.34243593645101,0.159544317990673,1.54080656938085,1.92324885321794,1.33243904726265,0.404950534779652,0,2.20823515750766,0.959801035240171,0.42438965179803,0.425216450755349,6.85107563286109,5.22399578277871,0.319984845586813,0,0.57423196411502,0.430761996159075,0.430942465371778,0.380046838912748,0,0.221730510655305,0,0.61506478758457,0,0.288851619751275,0.664938581433969,0.816677425049476,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0.485510353031154,0,0.304130793658544,0,0,0.218025156380447,0,0.194429899074283,0.279972843250725,0,1.51004345451963,3.62681071005672,2.01656279485478,0.257259436035947,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244981598429908,0.479227355091182,0,0,0.383062014255563,0,0.395658863190582,0.365950574409639,0,0,0,0,0,0.142371680799103,0.745597783301202,0.075726193333184,0.151143120213571,1.44932244350839,0,1.3599426674155,0.539703191637817,0.649776417447669,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0.517875767294343,0,0.520455980298408,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0.741584903203122,0.144599356919912,0.884610551949874,0,0.220841518460394,0,0,0.292780797011547,0.83778682725382,0.255457055208591,3.59445373517761,2.99951365496704,2.79554499560742,0,0,0.125654352112864,0.347648640384553,0,0,0,0.305518091550949,0.746441823660558,0,0.210441855886474,0.650602214813519,0.459804208866946,0.540186389416048,0.30140963567143,0.476255494059295,0.384341160854549,1.40552586839593,0,0.862271971731369,0.567318240503458,0.351902248327898,0.43839146485515,0.278047249225598,0,0.205782136407943,0.398068533636986,1.40442637462647,1.28673953557358,0.284163499395593,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.983821158737019,0,0.465067889500816,0.536546802799238,0.116765342367169,0.329119699826961,0.32833492815819,0.0810688095458557,0,0.219550115291051,0,0,0.205809224758569,0.330418782983798,0.264450566663544,0.426576501070468,0.464473343720877,0.38660238396628,0.80673409849337,0.22237804384487,0.190225626112559,0.474529061544512,0,0.754005626400808,0,0.19496408711912,0,0.432276099749388,0,0.569003702859245,0.685491075658373,0,0.407302655690628,0.193952487167626,0.210407459670956,0.126473074248515,0.442830443938806,0,0.123397163921801,0,0.333690211432188,0.786235980452812,0.224862112384854,1.01430060694251,0.72353147925725,0,0,0.324270453550071,0,1.43768206527355,0.372140947668503,0,0,0,0.482443521363367,0.184753190166605,0,0.651859905768103,0.678980343100753,0.704070744865506,0.167506257441816,0.952174563544055,0.390267295715598,0.630540576424764,0,0.318909537314974,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0.163934945376675,0.504941854408746,0.315508219416257,0,0.430846795465598,0.477937595905104,0.222798674082394,0,0,0.584511715822624,0.395287777946524,0.321321316421807,1.70328102249922,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0.565815239267694,0,0.307435147943927,0,0,0.712994756769443,0,0,0,0,0,0.129358683782755,0.214337035031592,0.532020700926821,0.178368817602071,0,0.304464949114599,0,0.63549621259146,0,0,0.161464426695906,0.301564624640779,0.596861720015682,0.492422699235184,0,0.741701208042039,0,0.412773735926445,0.370389054739423,0.376736914009382,0.683471138605126,0.228778173206523,4.9293744698218,4.05859211738608,5.52799895217695,0,0.158167996790568,0.406638934253697,0.216010681643603,0,0.218362563746178,0.134864346384821,0.247960367176008,0.26175594198403,0.259229946583586,0.621339313086926,0,0.747582730219894,0,0.194451188344048,0.129159823477731,0.337912250981556,0.352071715937262,0.781226309063701,0.943734099831398,0.483168241652012,0.576060012515731,5.68820017130721,0.405450430580328,0.308132871494482,0.77952493786677,2.68540043501222,4.37098980518783,3.24527713703916,3.2491695978407,5.04832249740738,5.86792411243499,6.85618058930516,4.77543615624787,4.9068039236568,5.14258369598903,0,0.665957860122194,0.269141569828427,0.335769232728157,0.386379188064381,0.375364950902364,0.36630324853453,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.31136204275253,0.399024873401031,0.512200817262403,0.243106717068294,0,0.183843508450014,0.44449345560323,0.824140228955577,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0.384150914429216,0.402048282689293,0.476293691283074,0,0,0,0.441596760403192,0,0,0,0,0.282328141245992,0,0.365855945745545,0,0.271608227691724,0,0.474540072496697,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0.644613162144895,0.191288332068843,0,0
|short_description=p4@Pan3
|short_description=p4@Pan3
}}
}}

Latest revision as of 18:10, 25 September 2015

Short description:p4@Pan3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Pan3_5end
Coexpression cluster:MCL_coexpression_mm9:382
Association with transcript: -277bp_to_ENSMUST00000031651, ENSMUST00000085571, NM_028291, uc009aod.2_5end
EntrezGene:Pan3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Pan3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.92
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.22
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.59
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.80
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.93
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.53
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B55.69
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G44.37
thymus, neonate N02.CNhs11181.1541-43F83.25
thymus, neonate N03.CNhs11137.2104-43C73.25
thymus, neonate N06.CNhs11197.681-26C45.05
thymus, neonate N07.CNhs11211.713-19D35.87
thymus, neonate N10.CNhs11194.748-24E46.86
thymus, neonate N20.CNhs11186.820-7A24.78
thymus, neonate N25.CNhs11125.1362-25G74.91
thymus, neonate N30.CNhs11132.1393-42G25.14
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
thymus2.70e-2223
neck2.70e-2223
respiratory system epithelium2.70e-2223
hemolymphoid system gland2.70e-2223
pharyngeal epithelium2.70e-2223
thymic region2.70e-2223
pharyngeal gland2.70e-2223
entire pharyngeal arch endoderm2.70e-2223
thymus primordium2.70e-2223
early pharyngeal endoderm2.70e-2223
pharynx3.23e-2124
gland of gut3.23e-2124
upper respiratory tract3.23e-2124
chordate pharynx3.23e-2124
pharyngeal arch system3.23e-2124
pharyngeal region of foregut3.23e-2124
segment of respiratory tract1.83e-1827
hemopoietic organ6.05e-1729
immune organ6.05e-1729
hematopoietic system6.32e-1645
blood island6.32e-1645
mixed endoderm/mesoderm-derived structure2.50e-1535
craniocervical region8.89e-1536
hemolymphoid system1.19e-1448
immune system1.19e-1448
connective tissue1.68e-1446
gut epithelium3.53e-1255
anterior region of body9.16e-1243
respiratory tract5.82e-1141
endocrine gland8.44e-1160
respiratory system1.28e-1042
gland1.23e-0965
unilaminar epithelium2.00e-0966
endo-epithelium7.87e-0969
endocrine system2.76e-0872
foregut4.87e-0780
lateral plate mesoderm5.38e-0787
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:148241866..148241878,%2B&oldid=4206251"