FFCP PHASE1:Mm9::chr3:95032669..95032674,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr3:95032669..95032674,+ to FFCP PHASE1:Mm9::chr3:95032669..95032674,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=57912 | |EntrezGene=57912 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8BHL7 | |UniProt=Q8BHL7 | ||
|association_with_transcript=15bp_to_ENSMUST00000053872_5end | |||
|cluster_id=chr3:95032669..95032674,+ | |||
|description=CAGE_peak_3_at_Cdc42se1_5end | |||
|id=chr3:95032669..95032674,+ | |||
|ontology_enrichment_celltype=CL:0002319!3.45e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.98e-07,43;CL:0000221,8.61e-07,44;CL:0000133,8.61e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.17e-10!75;UBERON:0001016!3.17e-10!75;UBERON:0001017!2.27e-09!73;UBERON:0005743!2.27e-09!73;UBERON:0004121!7.93e-09!102;UBERON:0000924!7.93e-09!102;UBERON:0006601!7.93e-09!102;UBERON:0001049!3.99e-07!52;UBERON:0005068!3.99e-07!52;UBERON:0006241!3.99e-07!52;UBERON:0007135!3.99e-07!52;UBERON:0000955!9.31e-07!50;UBERON:0006238!9.31e-07!50;UBERON:0002020!9.34e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.44e-10,75;UBERON:0001017,4.26e-09,73;UBERON:0004121,4.33e-09,95;UBERON:0000924,4.33e-09,95;UBERON:0006601,4.33e-09,95;UBERON:0000073,7.69e-08,54;UBERON:0001049,5.05e-07,52;UBERON:0005068,5.05e-07,52;UBERON:0006241,5.05e-07,52;UBERON:0007135,5.05e-07,52;UBERON:0002020,6.15e-07,34 | |||
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|phase1_expression=0.960893082628764,2.44282785347553,0.454999239389536,0.60492842261366,1.00179145989269,1.51091344720701,1.63528848416868,1.54947988129892,0.703943610758334,0.70219357896598,1.54096171402954,1.19658238493005,1.71200729931206,1.92324885321794,1.33243904726265,0.607425802169478,0,2.68142840554502,1.50825876966313,0,1.27564935226605,0.794327609607082,0.522399578277871,1.27993938234725,2.52350209173887,0.57423196411502,0.86152399231815,0.861884930743556,1.52018735565099,1.00812051903972,0.665191531965914,2.54012269383853,0.61506478758457,0,0.866554859253824,0.166234645358492,0,3.34825304589526,3.1253413780952,2.61761871986899,2.94115744015507,3.41522742479223,0.485510353031154,0.755380907853464,0.608261587317087,0.734187008646726,1.56478268869608,4.36050312760893,4.17403747195497,0.58328969722285,1.81982348112971,4.31257693094915,1.00669563634642,1.45072428402269,2.68875039313971,1.54355661621568,0.85960031981627,3.09403255366465,2.22548106945558,2.11596391708813,0.633831403506179,2.71075625655306,0,2.6996991518442,3.9554654502679,0.7104801149461,3.59520132622086,2.68952813725088,1.45165457231869,2.29510095163874,1.68259969081106,2.28520787523043,1.76694832761291,1.71487118900936,2.39613677545591,0.919218786610021,2.20231761998777,1.91531007127782,2.15049146558741,1.84640802822271,2.19570344645783,1.04182674111352,0.558365998002762,1.68828783009504,1.68078072554491,1.47314292736834,1.85083185038834,1.4911955666024,2.95332153999418,2.26714680320357,1.73918693221007,1.72084775396277,0,1.07940638327563,1.94932925234301,0,0.983110940922263,0.681721290312231,1.03914401841148,0.35333957451034,0.422530259330042,0,0,7.11066703153331,1.5154372870785,0.506719730950197,2.52762222507392,1.02765491747154,0.776813650941515,0.742210695324124,1.04091196059682,1.52232739156071,0.461230994512117,2.11011696773672,1.05829836422134,1.0053327306374,1.48316980640624,1.15679485535929,1.76922110389975,0.485300549842228,0.441683036920787,1.45462575940567,0,2.04946557908083,1.67557365450764,1.53274233125155,0.838705871541442,2.39961092397363,0.381210681219194,1.3481157546434,1.83000241127451,1.50785222535437,2.25971616249959,0.511430914660661,1.45451631191692,0.811206315338788,0.81471491080253,0.870848794270651,1.26361379216837,1.26265113531884,0.910843100738926,1.37941262660084,1.44049703844279,0.60281927134286,0.748401490664606,0.640568601424249,0.843315521037559,1.81092359517311,1.5089759505299,1.13463648100692,1.40760899331159,0.876782929710299,0.556094498451196,0.696504333044333,0.823128545631774,0.995171334092466,0.702213187313235,1.02939162845886,0,0.828503090142008,1.17263029990548,1.2604344302271,0.710234206755631,0.787056926989615,0.771335564436891,1.39520366850245,0.268273401399619,1.05088808130453,1.48103864922132,0.656669856316381,0.648550476366846,0.292399974850665,1.09775057645525,0.536825675041487,2.10289948564127,1.02904612379284,2.97376904685418,0.528901133327089,1.06644125267617,1.62565670302307,0.515469845288373,0.403367049246685,1.77902435075896,0.380451252225118,0.949058123089023,1.15289268306808,0.502670417600539,0.596869416123452,0,0.898819408654221,1.08069024937347,1.1948476395262,1.51734320762465,1.48523066392647,0,0.407302655690628,0.969762435838129,1.19230893813542,0.948548056863859,0.295220295959204,0.941992367048249,0.123397163921801,0.889357881261447,0.83422552858047,0.393117990226406,1.34917267430912,1.42002084971952,0.482354319504834,1.01850340712568,0,0.648540907100142,0.549122826376163,0,0,0.936113019343682,0.505157755894224,0.358794827043824,0.482443521363367,1.47802552133284,1.13694847062291,0.814824882210129,2.03694102930226,0.938760993154008,0.837531287209079,1.42826184531608,2.14647012643579,0.945810864637146,0.664394068946325,0.797273843287435,0.81931657357869,1.20879487306127,1.15719246865209,0,0.54390568381871,2.45882136509518,1.93155722413313,0.963303539926752,1.28932855251423,2.29508923527346,0.252470927204373,0.94652465824877,1.17131623288992,1.50796378412959,0.955875191810208,1.78238939265915,2.26461224631066,0.404810701674894,1.46127928955656,0.395287777946524,1.28528526568723,0.99358059645788,1.06839362200353,0.977321756121456,1.15479086080775,0,0.485561272309963,2.72091201268276,1.32023555829129,0.590603785761546,0.922305443831782,1.03371317267288,0,0.712994756769443,0.948110273807448,0,0,0.680879211507576,0.900305470156551,1.55230420539305,2.7863814554107,1.95074257006501,1.42695054081656,0.658196082408484,0.304464949114599,2.3467170806371,2.54198485036584,1.10264199027481,1.97863503529776,1.77610869365496,1.38719727334758,1.07435109602823,1.31312719796049,0.582961673259701,1.66882771809459,0.854354403989263,0.619160603889667,0.555583582109135,0.941842285023455,0.410082683163076,0.457556346413045,0.509935289981566,0.559805809294632,1.10559979043539,0.954670618015114,1.73984796469624,1.01659733563424,0.972048067396211,1.04544148007234,0.87345025498471,0.539457385539283,0.495920734352016,0.785267825952089,0.777689839750757,0.621339313086926,1.69107881605257,1.196132368351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| ||
|short_description=p3@Cdc42se1 | |||
}} | }} |
Latest revision as of 23:07, 25 September 2015
Short description: | p3@Cdc42se1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cdc42se1_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENSMUST00000053872_5end |
EntrezGene: | Cdc42se1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.98e-07 | 43 |
ectodermal cell | 8.61e-07 | 44 |
neurectodermal cell | 8.61e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.44e-10 | 75 |
central nervous system | 4.26e-09 | 73 |
ectoderm-derived structure | 4.33e-09 | 95 |
ectoderm | 4.33e-09 | 95 |
presumptive ectoderm | 4.33e-09 | 95 |
regional part of nervous system | 7.69e-08 | 54 |
neural tube | 5.05e-07 | 52 |
neural rod | 5.05e-07 | 52 |
future spinal cord | 5.05e-07 | 52 |
neural keel | 5.05e-07 | 52 |
gray matter | 6.15e-07 | 34 |