Personal tools

FFCP PHASE1:Mm9::chr3:95032669..95032674,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=57912
|EntrezGene=57912
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q8BHL7
|UniProt=Q8BHL7
|association_with_transcript=15bp_to_ENSMUST00000053872_5end
|association_with_transcript=15bp_to_ENSMUST00000053872_5end
|cluster_id=chr3:95032669..95032674,+
|description=CAGE_peak_3_at_Cdc42se1_5end
|description=CAGE_peak_3_at_Cdc42se1_5end
|id=chr3:95032669..95032674,+
|id=chr3:95032669..95032674,+
|ontology_enrichment_celltype=CL:0002319!3.45e-07!43
|ontology_enrichment_celltype=CL:0002319!3.45e-07!43
|ontology_enrichment_celltype_v019_2=CL:0002319,2.98e-07,43;CL:0000221,8.61e-07,44;CL:0000133,8.61e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.17e-10!75;UBERON:0001016!3.17e-10!75;UBERON:0001017!2.27e-09!73;UBERON:0005743!2.27e-09!73;UBERON:0004121!7.93e-09!102;UBERON:0000924!7.93e-09!102;UBERON:0006601!7.93e-09!102;UBERON:0001049!3.99e-07!52;UBERON:0005068!3.99e-07!52;UBERON:0006241!3.99e-07!52;UBERON:0007135!3.99e-07!52;UBERON:0000955!9.31e-07!50;UBERON:0006238!9.31e-07!50;UBERON:0002020!9.34e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.44e-10,75;UBERON:0001017,4.26e-09,73;UBERON:0004121,4.33e-09,95;UBERON:0000924,4.33e-09,95;UBERON:0006601,4.33e-09,95;UBERON:0000073,7.69e-08,54;UBERON:0001049,5.05e-07,52;UBERON:0005068,5.05e-07,52;UBERON:0006241,5.05e-07,52;UBERON:0007135,5.05e-07,52;UBERON:0002020,6.15e-07,34
|phase1_expression=0.960893082628764,2.44282785347553,0.454999239389536,0.60492842261366,1.00179145989269,1.51091344720701,1.63528848416868,1.54947988129892,0.703943610758334,0.70219357896598,1.54096171402954,1.19658238493005,1.71200729931206,1.92324885321794,1.33243904726265,0.607425802169478,0,2.68142840554502,1.50825876966313,0,1.27564935226605,0.794327609607082,0.522399578277871,1.27993938234725,2.52350209173887,0.57423196411502,0.86152399231815,0.861884930743556,1.52018735565099,1.00812051903972,0.665191531965914,2.54012269383853,0.61506478758457,0,0.866554859253824,0.166234645358492,0,3.34825304589526,3.1253413780952,2.61761871986899,2.94115744015507,3.41522742479223,0.485510353031154,0.755380907853464,0.608261587317087,0.734187008646726,1.56478268869608,4.36050312760893,4.17403747195497,0.58328969722285,1.81982348112971,4.31257693094915,1.00669563634642,1.45072428402269,2.68875039313971,1.54355661621568,0.85960031981627,3.09403255366465,2.22548106945558,2.11596391708813,0.633831403506179,2.71075625655306,0,2.6996991518442,3.9554654502679,0.7104801149461,3.59520132622086,2.68952813725088,1.45165457231869,2.29510095163874,1.68259969081106,2.28520787523043,1.76694832761291,1.71487118900936,2.39613677545591,0.919218786610021,2.20231761998777,1.91531007127782,2.15049146558741,1.84640802822271,2.19570344645783,1.04182674111352,0.558365998002762,1.68828783009504,1.68078072554491,1.47314292736834,1.85083185038834,1.4911955666024,2.95332153999418,2.26714680320357,1.73918693221007,1.72084775396277,0,1.07940638327563,1.94932925234301,0,0.983110940922263,0.681721290312231,1.03914401841148,0.35333957451034,0.422530259330042,0,0,7.11066703153331,1.5154372870785,0.506719730950197,2.52762222507392,1.02765491747154,0.776813650941515,0.742210695324124,1.04091196059682,1.52232739156071,0.461230994512117,2.11011696773672,1.05829836422134,1.0053327306374,1.48316980640624,1.15679485535929,1.76922110389975,0.485300549842228,0.441683036920787,1.45462575940567,0,2.04946557908083,1.67557365450764,1.53274233125155,0.838705871541442,2.39961092397363,0.381210681219194,1.3481157546434,1.83000241127451,1.50785222535437,2.25971616249959,0.511430914660661,1.45451631191692,0.811206315338788,0.81471491080253,0.870848794270651,1.26361379216837,1.26265113531884,0.910843100738926,1.37941262660084,1.44049703844279,0.60281927134286,0.748401490664606,0.640568601424249,0.843315521037559,1.81092359517311,1.5089759505299,1.13463648100692,1.40760899331159,0.876782929710299,0.556094498451196,0.696504333044333,0.823128545631774,0.995171334092466,0.702213187313235,1.02939162845886,0,0.828503090142008,1.17263029990548,1.2604344302271,0.710234206755631,0.787056926989615,0.771335564436891,1.39520366850245,0.268273401399619,1.05088808130453,1.48103864922132,0.656669856316381,0.648550476366846,0.292399974850665,1.09775057645525,0.536825675041487,2.10289948564127,1.02904612379284,2.97376904685418,0.528901133327089,1.06644125267617,1.62565670302307,0.515469845288373,0.403367049246685,1.77902435075896,0.380451252225118,0.949058123089023,1.15289268306808,0.502670417600539,0.596869416123452,0,0.898819408654221,1.08069024937347,1.1948476395262,1.51734320762465,1.48523066392647,0,0.407302655690628,0.969762435838129,1.19230893813542,0.948548056863859,0.295220295959204,0.941992367048249,0.123397163921801,0.889357881261447,0.83422552858047,0.393117990226406,1.34917267430912,1.42002084971952,0.482354319504834,1.01850340712568,0,0.648540907100142,0.549122826376163,0,0,0.936113019343682,0.505157755894224,0.358794827043824,0.482443521363367,1.47802552133284,1.13694847062291,0.814824882210129,2.03694102930226,0.938760993154008,0.837531287209079,1.42826184531608,2.14647012643579,0.945810864637146,0.664394068946325,0.797273843287435,0.81931657357869,1.20879487306127,1.15719246865209,0,0.54390568381871,2.45882136509518,1.93155722413313,0.963303539926752,1.28932855251423,2.29508923527346,0.252470927204373,0.94652465824877,1.17131623288992,1.50796378412959,0.955875191810208,1.78238939265915,2.26461224631066,0.404810701674894,1.46127928955656,0.395287777946524,1.28528526568723,0.99358059645788,1.06839362200353,0.977321756121456,1.15479086080775,0,0.485561272309963,2.72091201268276,1.32023555829129,0.590603785761546,0.922305443831782,1.03371317267288,0,0.712994756769443,0.948110273807448,0,0,0.680879211507576,0.900305470156551,1.55230420539305,2.7863814554107,1.95074257006501,1.42695054081656,0.658196082408484,0.304464949114599,2.3467170806371,2.54198485036584,1.10264199027481,1.97863503529776,1.77610869365496,1.38719727334758,1.07435109602823,1.31312719796049,0.582961673259701,1.66882771809459,0.854354403989263,0.619160603889667,0.555583582109135,0.941842285023455,0.410082683163076,0.457556346413045,0.509935289981566,0.559805809294632,1.10559979043539,0.954670618015114,1.73984796469624,1.01659733563424,0.972048067396211,1.04544148007234,0.87345025498471,0.539457385539283,0.495920734352016,0.785267825952089,0.777689839750757,0.621339313086926,1.69107881605257,1.19613236835183,1.15820943319968,1.36115831840833,0.774958940866387,1.85851738039856,1.64300134104056,1.8228613878153,1.99232754408851,1.44950472495604,1.15212002503146,0.948033361884535,2.22997736819181,1.02710957164827,1.42912905275575,1.25318686967237,0.993406773906324,2.28371354087941,1.32920574457119,0.807731599585181,0.762068066549998,1.10908803650525,2.63136277997332,1.25075394132428,1.40252282617883,0.226730383615211,3.32978930061097,1.16628013592318,2.85403847818933,1.54551675225752,2.064507229963,0.915758121336325,1.50057865355346,2.00628841614145,3.95326289831947,2.76195141904306,1.14579102687879,2.06223818812425,0.685082519770642,3.7769694869485,2.02506750069542,3.60256962579376,0.906284817968409,1.55328093525546,2.28332164685189,0.399024873401031,1.19513524027894,1.45864030240976,1.46729213839588,1.10306105070008,1.77797382241292,0.824140228955577,1.28367683836726,1.01078884705519,0.760437899670719,1.13175804831646,0.749132059759059,0.89635213366817,1.26358031702349,0.952587382566147,1.0429589335037,0.964546102318525,1.23625770240992,0.588795680537589,0.685738504770831,0.887379030796687,1.43061713968393,0.581385666529314,1.12931256498397,0.761531471025089,0.73171189149109,1.31534855718921,0.543216455383447,1.68342681497322,1.54225523561426,0.886540341380071,1.22769312950907,0.77468420592983,0.771626443924566,1.49886346762768,1.40358965067245,0.214871054048298,0.956441660344217,1.76473135295612,1.15933917810211
|phase1_expression=0.960893082628764,2.44282785347553,0.454999239389536,0.60492842261366,1.00179145989269,1.51091344720701,1.63528848416868,1.54947988129892,0.703943610758334,0.70219357896598,1.54096171402954,1.19658238493005,1.71200729931206,1.92324885321794,1.33243904726265,0.607425802169478,0,2.68142840554502,1.50825876966313,0,1.27564935226605,0.794327609607082,0.522399578277871,1.27993938234725,2.52350209173887,0.57423196411502,0.86152399231815,0.861884930743556,1.52018735565099,1.00812051903972,0.665191531965914,2.54012269383853,0.61506478758457,0,0.866554859253824,0.166234645358492,0,3.34825304589526,3.1253413780952,2.61761871986899,2.94115744015507,3.41522742479223,0.485510353031154,0.755380907853464,0.608261587317087,0.734187008646726,1.56478268869608,4.36050312760893,4.17403747195497,0.58328969722285,1.81982348112971,4.31257693094915,1.00669563634642,1.45072428402269,2.68875039313971,1.54355661621568,0.85960031981627,3.09403255366465,2.22548106945558,2.11596391708813,0.633831403506179,2.71075625655306,0,2.6996991518442,3.9554654502679,0.7104801149461,3.59520132622086,2.68952813725088,1.45165457231869,2.29510095163874,1.68259969081106,2.28520787523043,1.76694832761291,1.71487118900936,2.39613677545591,0.919218786610021,2.20231761998777,1.91531007127782,2.15049146558741,1.84640802822271,2.19570344645783,1.04182674111352,0.558365998002762,1.68828783009504,1.68078072554491,1.47314292736834,1.85083185038834,1.4911955666024,2.95332153999418,2.26714680320357,1.73918693221007,1.72084775396277,0,1.07940638327563,1.94932925234301,0,0.983110940922263,0.681721290312231,1.03914401841148,0.35333957451034,0.422530259330042,0,0,7.11066703153331,1.5154372870785,0.506719730950197,2.52762222507392,1.02765491747154,0.776813650941515,0.742210695324124,1.04091196059682,1.52232739156071,0.461230994512117,2.11011696773672,1.05829836422134,1.0053327306374,1.48316980640624,1.15679485535929,1.76922110389975,0.485300549842228,0.441683036920787,1.45462575940567,0,2.04946557908083,1.67557365450764,1.53274233125155,0.838705871541442,2.39961092397363,0.381210681219194,1.3481157546434,1.83000241127451,1.50785222535437,2.25971616249959,0.511430914660661,1.45451631191692,0.811206315338788,0.81471491080253,0.870848794270651,1.26361379216837,1.26265113531884,0.910843100738926,1.37941262660084,1.44049703844279,0.60281927134286,0.748401490664606,0.640568601424249,0.843315521037559,1.81092359517311,1.5089759505299,1.13463648100692,1.40760899331159,0.876782929710299,0.556094498451196,0.696504333044333,0.823128545631774,0.995171334092466,0.702213187313235,1.02939162845886,0,0.828503090142008,1.17263029990548,1.2604344302271,0.710234206755631,0.787056926989615,0.771335564436891,1.39520366850245,0.268273401399619,1.05088808130453,1.48103864922132,0.656669856316381,0.648550476366846,0.292399974850665,1.09775057645525,0.536825675041487,2.10289948564127,1.02904612379284,2.97376904685418,0.528901133327089,1.06644125267617,1.62565670302307,0.515469845288373,0.403367049246685,1.77902435075896,0.380451252225118,0.949058123089023,1.15289268306808,0.502670417600539,0.596869416123452,0,0.898819408654221,1.08069024937347,1.1948476395262,1.51734320762465,1.48523066392647,0,0.407302655690628,0.969762435838129,1.19230893813542,0.948548056863859,0.295220295959204,0.941992367048249,0.123397163921801,0.889357881261447,0.83422552858047,0.393117990226406,1.34917267430912,1.42002084971952,0.482354319504834,1.01850340712568,0,0.648540907100142,0.549122826376163,0,0,0.936113019343682,0.505157755894224,0.358794827043824,0.482443521363367,1.47802552133284,1.13694847062291,0.814824882210129,2.03694102930226,0.938760993154008,0.837531287209079,1.42826184531608,2.14647012643579,0.945810864637146,0.664394068946325,0.797273843287435,0.81931657357869,1.20879487306127,1.15719246865209,0,0.54390568381871,2.45882136509518,1.93155722413313,0.963303539926752,1.28932855251423,2.29508923527346,0.252470927204373,0.94652465824877,1.17131623288992,1.50796378412959,0.955875191810208,1.78238939265915,2.26461224631066,0.404810701674894,1.46127928955656,0.395287777946524,1.28528526568723,0.99358059645788,1.06839362200353,0.977321756121456,1.15479086080775,0,0.485561272309963,2.72091201268276,1.32023555829129,0.590603785761546,0.922305443831782,1.03371317267288,0,0.712994756769443,0.948110273807448,0,0,0.680879211507576,0.900305470156551,1.55230420539305,2.7863814554107,1.95074257006501,1.42695054081656,0.658196082408484,0.304464949114599,2.3467170806371,2.54198485036584,1.10264199027481,1.97863503529776,1.77610869365496,1.38719727334758,1.07435109602823,1.31312719796049,0.582961673259701,1.66882771809459,0.854354403989263,0.619160603889667,0.555583582109135,0.941842285023455,0.410082683163076,0.457556346413045,0.509935289981566,0.559805809294632,1.10559979043539,0.954670618015114,1.73984796469624,1.01659733563424,0.972048067396211,1.04544148007234,0.87345025498471,0.539457385539283,0.495920734352016,0.785267825952089,0.777689839750757,0.621339313086926,1.69107881605257,1.19613236835183,1.15820943319968,1.36115831840833,0.774958940866387,1.85851738039856,1.64300134104056,1.8228613878153,1.99232754408851,1.44950472495604,1.15212002503146,0.948033361884535,2.22997736819181,1.02710957164827,1.42912905275575,1.25318686967237,0.993406773906324,2.28371354087941,1.32920574457119,0.807731599585181,0.762068066549998,1.10908803650525,2.63136277997332,1.25075394132428,1.40252282617883,0.226730383615211,3.32978930061097,1.16628013592318,2.85403847818933,1.54551675225752,2.064507229963,0.915758121336325,1.50057865355346,2.00628841614145,3.95326289831947,2.76195141904306,1.14579102687879,2.06223818812425,0.685082519770642,3.7769694869485,2.02506750069542,3.60256962579376,0.906284817968409,1.55328093525546,2.28332164685189,0.399024873401031,1.19513524027894,1.45864030240976,1.46729213839588,1.10306105070008,1.77797382241292,0.824140228955577,1.28367683836726,1.01078884705519,0.760437899670719,1.13175804831646,0.749132059759059,0.89635213366817,1.26358031702349,0.952587382566147,1.0429589335037,0.964546102318525,1.23625770240992,0.588795680537589,0.685738504770831,0.887379030796687,1.43061713968393,0.581385666529314,1.12931256498397,0.761531471025089,0.73171189149109,1.31534855718921,0.543216455383447,1.68342681497322,1.54225523561426,0.886540341380071,1.22769312950907,0.77468420592983,0.771626443924566,1.49886346762768,1.40358965067245,0.214871054048298,0.956441660344217,1.76473135295612,1.15933917810211
|short_description=p3@Cdc42se1
|short_description=p3@Cdc42se1
}}
}}

Latest revision as of 23:07, 25 September 2015

Short description:p3@Cdc42se1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Cdc42se1_5end
Coexpression cluster:NA
Association with transcript: 15bp_to_ENSMUST00000053872_5end
EntrezGene:Cdc42se1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Cdc42se1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.20
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.92
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.17
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D92.95
Mouse Schwann, donor2.CNhs12573.11746-123F92.27
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D50.95
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.30
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G32.54
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H31.39
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D91.99
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F82.28
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E41.11
thymus, neonate N20.CNhs11186.820-7A22.63
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.85
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I82.28
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell2.98e-0743
ectodermal cell8.61e-0744
neurectodermal cell8.61e-0744

Uber anatomy
Ontology termp-valuen
nervous system5.44e-1075
central nervous system4.26e-0973
ectoderm-derived structure4.33e-0995
ectoderm4.33e-0995
presumptive ectoderm4.33e-0995
regional part of nervous system7.69e-0854
neural tube5.05e-0752
neural rod5.05e-0752
future spinal cord5.05e-0752
neural keel5.05e-0752
gray matter6.15e-0734
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:95032669..95032674,%2B&oldid=4219433"