FFCP PHASE1:Mm9::chr19:55967842..55967878,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21416 | |EntrezGene=21416 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000145249_5end | |association_with_transcript=0bp_to_ENSMUST00000145249_5end | ||
|cluster_id=chr19:55967842..55967878,+ | |||
|description=CAGE_peak_13_at_Tcf7l2_5end | |description=CAGE_peak_13_at_Tcf7l2_5end | ||
|id=chr19:55967842..55967878,+ | |id=chr19:55967842..55967878,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.82e-07!23;CL:0000337!1.82e-07!23;CL:0002613!7.45e-07!3 | |ontology_enrichment_celltype=CL:0000117!1.82e-07!23;CL:0000337!1.82e-07!23;CL:0002613!7.45e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.93e-23,23;CL:0000337,1.93e-23,23;CL:0002613,4.98e-22,3;CL:0002610,2.08e-21,3;CL:0000120,1.85e-20,3;CL:0000540,4.18e-16,33;CL:0000047,4.18e-16,33;CL:0000031,4.18e-16,33;CL:0000404,4.18e-16,33;CL:0000393,1.68e-13,39;CL:0000211,1.68e-13,39;CL:0002319,3.64e-12,43;CL:0000221,7.21e-12,44;CL:0000133,7.21e-12,44;CL:0002321,4.08e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,2.08e-21,3;UBERON:0002275,2.08e-21,3;UBERON:0000369,1.79e-13,5;UBERON:0002435,1.79e-13,5;UBERON:0000204,1.79e-13,5;UBERON:0010082,1.79e-13,5;UBERON:0001017,2.35e-12,73;UBERON:0001016,5.40e-12,75;UBERON:0000073,1.67e-09,54;UBERON:0004121,3.29e-09,95;UBERON:0000924,3.29e-09,95;UBERON:0006601,3.29e-09,95;UBERON:0002420,1.26e-08,8;UBERON:0007245,1.26e-08,8;UBERON:0010009,1.26e-08,8;UBERON:0010011,1.26e-08,8;UBERON:0000454,1.26e-08,8;UBERON:0002259,5.62e-08,1;UBERON:0002314,5.62e-08,1;UBERON:0004061,5.62e-08,1;UBERON:0006777,5.62e-08,1;UBERON:0005882,5.62e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,3.1739458756322,2.53532561402472,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,6.60695285996332,5.2351808614927,4.45458946443106,32.5759130693579,40.0715878978554,21.8783615633839,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0.11981512450592,0,0,3.14560342750128,0,0.251308704225729,0,0,4.1557608911912,1.29793010454206,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0.556094498451196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93408612825759,1.59609949360412,0.853668028770671,0.486213434136588,0.419226325255965,0.367687016900028,0.44449345560323,0.824140228955577,0,0.505394423527595,0,0.188626341386076,0.280924522409647,0.512201219238954,0.689225627467359,0,0.115884325944855,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.354951612318675,0,0.581385666529314,0.376437521661322,0.507687647350059,0.182927972872773,0.789209134313529,0,0,0.474540072496697,0.394017929502254,0,0.619747364743864,0.385813221962283,0.999242311751784,0,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,3.1739458756322,2.53532561402472,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,6.60695285996332,5.2351808614927,4.45458946443106,32.5759130693579,40.0715878978554,21.8783615633839,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0.11981512450592,0,0,3.14560342750128,0,0.251308704225729,0,0,4.1557608911912,1.29793010454206,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0.556094498451196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93408612825759,1.59609949360412,0.853668028770671,0.486213434136588,0.419226325255965,0.367687016900028,0.44449345560323,0.824140228955577,0,0.505394423527595,0,0.188626341386076,0.280924522409647,0.512201219238954,0.689225627467359,0,0.115884325944855,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.354951612318675,0,0.581385666529314,0.376437521661322,0.507687647350059,0.182927972872773,0.789209134313529,0,0,0.474540072496697,0.394017929502254,0,0.619747364743864,0.385813221962283,0.999242311751784,0,0.429742108096597,0,0,0 | ||
|short_description=p13@Tcf7l2 | |short_description=p13@Tcf7l2 | ||
}} | }} |
Latest revision as of 23:55, 25 September 2015
Short description: | p13@Tcf7l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Tcf7l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | 0bp_to_ENSMUST00000145249_5end |
EntrezGene: | Tcf7l2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.93e-23 | 23 |
neuroblast (sensu Vertebrata) | 1.93e-23 | 23 |
striatum neuron | 4.98e-22 | 3 |
raphe nuclei neuron | 2.08e-21 | 3 |
granule cell | 1.85e-20 | 3 |
neuron | 4.18e-16 | 33 |
neuronal stem cell | 4.18e-16 | 33 |
neuroblast | 4.18e-16 | 33 |
electrically signaling cell | 4.18e-16 | 33 |
electrically responsive cell | 1.68e-13 | 39 |
electrically active cell | 1.68e-13 | 39 |
neural cell | 3.64e-12 | 43 |
ectodermal cell | 7.21e-12 | 44 |
neurectodermal cell | 7.21e-12 | 44 |
embryonic cell | 4.08e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 2.08e-21 | 3 |
reticular formation | 2.08e-21 | 3 |
corpus striatum | 1.79e-13 | 5 |
striatum | 1.79e-13 | 5 |
ventral part of telencephalon | 1.79e-13 | 5 |
future corpus striatum | 1.79e-13 | 5 |
central nervous system | 2.35e-12 | 73 |
nervous system | 5.40e-12 | 75 |
regional part of nervous system | 1.67e-09 | 54 |
ectoderm-derived structure | 3.29e-09 | 95 |
ectoderm | 3.29e-09 | 95 |
presumptive ectoderm | 3.29e-09 | 95 |
basal ganglion | 1.26e-08 | 8 |
nuclear complex of neuraxis | 1.26e-08 | 8 |
aggregate regional part of brain | 1.26e-08 | 8 |
collection of basal ganglia | 1.26e-08 | 8 |
cerebral subcortex | 1.26e-08 | 8 |
corpora quadrigemina | 5.62e-08 | 1 |
midbrain tectum | 5.62e-08 | 1 |
neural tube mantle layer | 5.62e-08 | 1 |
tectal plate | 5.62e-08 | 1 |
neural tube alar plate | 5.62e-08 | 1 |