FFCP PHASE1:Mm9::chr11:97660638..97660649,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=16796|HGNC=|MCL_coexpression_id=7|UniProt=Q61792|association_with_transcript=-229bp_to_ENSMUST00000043843_5end|description=CAGE_peak_7_at_Lasp1_5end|id=chr11:97660638..97660649,+|ontology_enrichment_celltype=CL:0000791!7.81e-09!9;CL:0000789!7.81e-09!9;CL:0002420!7.81e-09!9;CL:0002419!7.81e-09!9;CL:0000790!7.81e-09!9;CL:0000624!5.02e-08!8;CL:0000542!3.29e-07!13;CL:0000051!3.29e-07!13;CL:0000838!3.63e-07!12|ontology_enrichment_celltype_v019_2=CL:0000791,1.33e-23,9;CL:0000789,1.33e-23,9;CL:0002420,1.33e-23,9;CL:0002419,1.33e-23,9;CL:0000790,1.33e-23,9;CL:0000624,3.75e-21,8;CL:0000838,4.24e-21,12;CL:0000542,2.62e-19,13;CL:0000051,2.62e-19,13;CL:0000084,5.66e-19,11;CL:0000827,5.66e-19,11;CL:0000893,2.07e-16,6;CL:0002489,2.07e-16,6;CL:0000898,2.07e-16,6;CL:0000809,2.07e-16,6;CL:0000810,2.07e-16,6;CL:0000895,2.07e-16,6;CL:0000808,2.07e-16,6;CL:0000894,2.07e-16,6;CL:0000806,2.07e-16,6;CL:0000807,2.07e-16,6;CL:0000805,2.07e-16,6;CL:0002425,2.07e-16,6;CL:0002436,2.07e-16,6;CL:0002427,2.07e-16,6;CL:0002428,2.07e-16,6;CL:0002429,2.07e-16,6;CL:0002433,2.07e-16,6;CL:0002431,2.07e-16,6;CL:0002432,2.07e-16,6;CL:0000738,2.95e-14,17;CL:0002087,2.95e-14,17;CL:0000066,6.35e-10,25;CL:0000349,5.11e-09,3;CL:0000351,5.11e-09,3;CL:0002031,5.14e-09,25;CL:0000988,6.41e-08,32;CL:0002032,6.41e-08,32;CL:0000037,6.41e-08,32;CL:0000837,6.41e-08,32;CL:0000068,6.77e-08,3;CL:0002202,6.77e-08,3;CL:0000069,6.77e-08,3;CL:0002632,6.77e-08,3;CL:0002368,6.77e-08,3;CL:0000307,6.77e-08,3;CL:0000377,6.77e-08,3;CL:0000682,8.44e-08,3;CL:0002076,3.02e-07,15;CL:0000239,6.20e-07,6;CL:0000677,6.20e-07,6;CL:0000584,6.20e-07,6;CL:0000223,7.32e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000072!1.13e-11!27;UBERON:0003408!4.25e-11!24;UBERON:0002370!1.83e-10!23;UBERON:0000974!1.83e-10!23;UBERON:0004807!1.83e-10!23;UBERON:0005058!1.83e-10!23;UBERON:0003351!1.83e-10!23;UBERON:0009113!1.83e-10!23;UBERON:0003295!1.83e-10!23;UBERON:0009722!1.83e-10!23;UBERON:0005562!1.83e-10!23;UBERON:0007690!1.83e-10!23;UBERON:0006562!1.16e-09!24;UBERON:0001557!1.16e-09!24;UBERON:0001042!1.16e-09!24;UBERON:0008814!1.16e-09!24;UBERON:0009145!1.16e-09!24;UBERON:0004177!9.22e-09!29;UBERON:0003929!2.72e-07!55;UBERON:0001004!3.39e-07!42;UBERON:0000063!7.94e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0000072,1.13e-17,27;UBERON:0003408,5.92e-15,24;UBERON:0002370,2.09e-13,23;UBERON:0000974,2.09e-13,23;UBERON:0004807,2.09e-13,23;UBERON:0005058,2.09e-13,23;UBERON:0003351,2.09e-13,23;UBERON:0009113,2.09e-13,23;UBERON:0003295,2.09e-13,23;UBERON:0009722,2.09e-13,23;UBERON:0005562,2.09e-13,23;UBERON:0007690,2.09e-13,23;UBERON:0006562,9.72e-13,24;UBERON:0001557,9.72e-13,24;UBERON:0001042,9.72e-13,24;UBERON:0008814,9.72e-13,24;UBERON:0009145,9.72e-13,24;UBERON:0001004,1.21e-11,42;UBERON:0000065,1.79e-10,41;UBERON:0004177,4.25e-10,29;UBERON:0005057,4.25e-10,29;UBERON:0000077,1.48e-09,35;UBERON:0003929,1.51e-09,55;UBERON:0007811,5.05e-09,36;UBERON:0000358,5.11e-09,3;UBERON:0000307,5.11e-09,3;UBERON:0007010,5.11e-09,3;UBERON:0003126,6.77e-08,3;UBERON:0001005,6.77e-08,3;UBERON:0007196,6.77e-08,3;UBERON:0001558,6.77e-08,3;UBERON:0000490,2.51e-07,66;UBERON:0000153,4.13e-07,43;UBERON:0005911,7.58e-07,69|phase1_expression=0,2.79180326111489,1.81999695755814,0.30246421130683,0.500895729946347,2.68606835059024,3.03696432774183,3.87369970324729,48.99447530878,23.4064526321993,4.79410311031414,3.27065851880879,6.50562773738582,4.63328132820686,0,0,0,0.315462165358238,0.548457734422955,0.84877930359606,0,0,0,0.47997726838022,0.22940928106717,1.72269589234506,2.58457197695445,1.50829862880122,0,0,0,0,0,0,0.577703239502549,0,0.612508068787107,0,0.7813353445238,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,2.01339127269284,4.35217285206807,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,6.66688324013859,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,1.73192832808971,1.77351905832569,2.52762222507392,0.11418387971906,0.776813650941515,0,0.173485326766136,0,0.230615497256059,0,0.23517741427141,0,0,0,0,0.323533699894818,0,0.484875253135222,0,0,0,0,0.239630249011841,1.19980546198682,0.762421362438388,0,0,0.753926112677186,0.173824320192276,0.255715457330331,0.41557608911912,0,0.305518091550949,0,0.252722758433675,0,0,0.229902104433473,0.360124259610698,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0.215567992932842,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.330418782983798,0.264450566663544,0.213288250535234,0,0.128867461322093,0,0,0.190225626112559,0.474529061544512,0,0,0,0,0,0.216138049874694,0.398282546508734,0.189667900953082,0,0,0.203651327845314,0,0.140271639780637,0.252946148497029,0.147610147979602,0.31399745568275,0.246794327843601,0.296452627087149,0.333690211432188,0.196558995113203,0,0,0,0,0.575392274901621,0,0,0,0,0,0.505157755894224,0,0,0.184753190166605,0,0,0,0,0.502518772325447,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0.485561272309963,0.604647113929502,0.188605079755898,0,0,0,0.363533729477506,0.712994756769443,0,0,0,0,0.36012218806262,0.258717367565509,0,0.354680467284547,0,0,0,0.23467170806371,0.42366414172764,0,0.16488625294148,1.13025098687134,0.301564624640779,0.358117032009409,0,0,0,0.341741761595705,0.206386867963223,0,0.188368457004691,0,0,1.18984900995699,1.11961161858926,1.10559979043539,0,0,0,0,0.209088296014469,0.218362563746178,0.134864346384821,0,0.26175594198403,0.129614973291793,1.24267862617385,0,0.299033092087958,0,0,0,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0.288030006257865,2.8441000856536,0.405450430580328,1.02710957164827,0.51968329191118,1.61124026100733,0.198681354781265,0.961563596159751,0.590758108698309,1.21159739937777,0.533447646584999,0.403304740547362,1.26695244961678,0.673482891482306,1.16876902181569,0,8.21348027484039,12.0216567856697,3.69346156000973,0.19318959403219,0,0.36630324853453,0,0,0.564751842617067,0,0.572895513439397,0.343706364687375,0,0,0.675022500231806,0,0,0.51776031175182,0,0.798049746802062,0,0,0.209613162627982,0.367687016900028,0.222246727801615,0.206035057238894,0,0,0,0.377252682772152,0.187283014939765,0.256100609619477,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.354951612318675,0,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0.409231043169689,0,0.385813221962283,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0|short_description=p7@Lasp1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16796 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=Q61792 | |||
|association_with_transcript=-229bp_to_ENSMUST00000043843_5end | |||
|cluster_id=chr11:97660638..97660649,+ | |||
|description=CAGE_peak_7_at_Lasp1_5end | |||
|id=chr11:97660638..97660649,+ | |||
|ontology_enrichment_celltype=CL:0000791!7.81e-09!9;CL:0000789!7.81e-09!9;CL:0002420!7.81e-09!9;CL:0002419!7.81e-09!9;CL:0000790!7.81e-09!9;CL:0000624!5.02e-08!8;CL:0000542!3.29e-07!13;CL:0000051!3.29e-07!13;CL:0000838!3.63e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.33e-23,9;CL:0000789,1.33e-23,9;CL:0002420,1.33e-23,9;CL:0002419,1.33e-23,9;CL:0000790,1.33e-23,9;CL:0000624,3.75e-21,8;CL:0000838,4.24e-21,12;CL:0000542,2.62e-19,13;CL:0000051,2.62e-19,13;CL:0000084,5.66e-19,11;CL:0000827,5.66e-19,11;CL:0000893,2.07e-16,6;CL:0002489,2.07e-16,6;CL:0000898,2.07e-16,6;CL:0000809,2.07e-16,6;CL:0000810,2.07e-16,6;CL:0000895,2.07e-16,6;CL:0000808,2.07e-16,6;CL:0000894,2.07e-16,6;CL:0000806,2.07e-16,6;CL:0000807,2.07e-16,6;CL:0000805,2.07e-16,6;CL:0002425,2.07e-16,6;CL:0002436,2.07e-16,6;CL:0002427,2.07e-16,6;CL:0002428,2.07e-16,6;CL:0002429,2.07e-16,6;CL:0002433,2.07e-16,6;CL:0002431,2.07e-16,6;CL:0002432,2.07e-16,6;CL:0000738,2.95e-14,17;CL:0002087,2.95e-14,17;CL:0000066,6.35e-10,25;CL:0000349,5.11e-09,3;CL:0000351,5.11e-09,3;CL:0002031,5.14e-09,25;CL:0000988,6.41e-08,32;CL:0002032,6.41e-08,32;CL:0000037,6.41e-08,32;CL:0000837,6.41e-08,32;CL:0000068,6.77e-08,3;CL:0002202,6.77e-08,3;CL:0000069,6.77e-08,3;CL:0002632,6.77e-08,3;CL:0002368,6.77e-08,3;CL:0000307,6.77e-08,3;CL:0000377,6.77e-08,3;CL:0000682,8.44e-08,3;CL:0002076,3.02e-07,15;CL:0000239,6.20e-07,6;CL:0000677,6.20e-07,6;CL:0000584,6.20e-07,6;CL:0000223,7.32e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000072!1.13e-11!27;UBERON:0003408!4.25e-11!24;UBERON:0002370!1.83e-10!23;UBERON:0000974!1.83e-10!23;UBERON:0004807!1.83e-10!23;UBERON:0005058!1.83e-10!23;UBERON:0003351!1.83e-10!23;UBERON:0009113!1.83e-10!23;UBERON:0003295!1.83e-10!23;UBERON:0009722!1.83e-10!23;UBERON:0005562!1.83e-10!23;UBERON:0007690!1.83e-10!23;UBERON:0006562!1.16e-09!24;UBERON:0001557!1.16e-09!24;UBERON:0001042!1.16e-09!24;UBERON:0008814!1.16e-09!24;UBERON:0009145!1.16e-09!24;UBERON:0004177!9.22e-09!29;UBERON:0003929!2.72e-07!55;UBERON:0001004!3.39e-07!42;UBERON:0000063!7.94e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000072,1.13e-17,27;UBERON:0003408,5.92e-15,24;UBERON:0002370,2.09e-13,23;UBERON:0000974,2.09e-13,23;UBERON:0004807,2.09e-13,23;UBERON:0005058,2.09e-13,23;UBERON:0003351,2.09e-13,23;UBERON:0009113,2.09e-13,23;UBERON:0003295,2.09e-13,23;UBERON:0009722,2.09e-13,23;UBERON:0005562,2.09e-13,23;UBERON:0007690,2.09e-13,23;UBERON:0006562,9.72e-13,24;UBERON:0001557,9.72e-13,24;UBERON:0001042,9.72e-13,24;UBERON:0008814,9.72e-13,24;UBERON:0009145,9.72e-13,24;UBERON:0001004,1.21e-11,42;UBERON:0000065,1.79e-10,41;UBERON:0004177,4.25e-10,29;UBERON:0005057,4.25e-10,29;UBERON:0000077,1.48e-09,35;UBERON:0003929,1.51e-09,55;UBERON:0007811,5.05e-09,36;UBERON:0000358,5.11e-09,3;UBERON:0000307,5.11e-09,3;UBERON:0007010,5.11e-09,3;UBERON:0003126,6.77e-08,3;UBERON:0001005,6.77e-08,3;UBERON:0007196,6.77e-08,3;UBERON:0001558,6.77e-08,3;UBERON:0000490,2.51e-07,66;UBERON:0000153,4.13e-07,43;UBERON:0005911,7.58e-07,69 | |||
|phase1_expression=0,2.79180326111489,1.81999695755814,0.30246421130683,0.500895729946347,2.68606835059024,3.03696432774183,3.87369970324729,48.99447530878,23.4064526321993,4.79410311031414,3.27065851880879,6.50562773738582,4.63328132820686,0,0,0,0.315462165358238,0.548457734422955,0.84877930359606,0,0,0,0.47997726838022,0.22940928106717,1.72269589234506,2.58457197695445,1.50829862880122,0,0,0,0,0,0,0.577703239502549,0,0.612508068787107,0,0.7813353445238,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,2.01339127269284,4.35217285206807,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,6.66688324013859,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,1.73192832808971,1.77351905832569,2.52762222507392,0.11418387971906,0.776813650941515,0,0.173485326766136,0,0.230615497256059,0,0.23517741427141,0,0,0,0,0.323533699894818,0,0.484875253135222,0,0,0,0,0.239630249011841,1.19980546198682,0.762421362438388,0,0,0.753926112677186,0.173824320192276,0.255715457330331,0.41557608911912,0,0.305518091550949,0,0.252722758433675,0,0,0.229902104433473,0.360124259610698,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0.215567992932842,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.330418782983798,0.264450566663544,0.213288250535234,0,0.128867461322093,0,0,0.190225626112559,0.474529061544512,0,0,0,0,0,0.216138049874694,0.398282546508734,0.189667900953082,0,0,0.203651327845314,0,0.140271639780637,0.252946148497029,0.147610147979602,0.31399745568275,0.246794327843601,0.296452627087149,0.333690211432188,0.196558995113203,0,0,0,0,0.575392274901621,0,0,0,0,0,0.505157755894224,0,0,0.184753190166605,0,0,0,0,0.502518772325447,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0.485561272309963,0.604647113929502,0.188605079755898,0,0,0,0.363533729477506,0.712994756769443,0,0,0,0,0.36012218806262,0.258717367565509,0,0.354680467284547,0,0,0,0.23467170806371,0.42366414172764,0,0.16488625294148,1.13025098687134,0.301564624640779,0.358117032009409,0,0,0,0.341741761595705,0.206386867963223,0,0.188368457004691,0,0,1.18984900995699,1.11961161858926,1.10559979043539,0,0,0,0,0.209088296014469,0.218362563746178,0.134864346384821,0,0.26175594198403,0.129614973291793,1.24267862617385,0,0.299033092087958,0,0,0,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0.288030006257865,2.8441000856536,0.405450430580328,1.02710957164827,0.51968329191118,1.61124026100733,0.198681354781265,0.961563596159751,0.590758108698309,1.21159739937777,0.533447646584999,0.403304740547362,1.26695244961678,0.673482891482306,1.16876902181569,0,8.21348027484039,12.0216567856697,3.69346156000973,0.19318959403219,0,0.36630324853453,0,0,0.564751842617067,0,0.572895513439397,0.343706364687375,0,0,0.675022500231806,0,0,0.51776031175182,0,0.798049746802062,0,0,0.209613162627982,0.367687016900028,0.222246727801615,0.206035057238894,0,0,0,0.377252682772152,0.187283014939765,0.256100609619477,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.354951612318675,0,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0.409231043169689,0,0.385813221962283,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p7@Lasp1 | |||
}} |
Latest revision as of 02:33, 26 September 2015
Short description: | p7@Lasp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Lasp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -229bp_to_ENSMUST00000043843_5end |
EntrezGene: | Lasp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
segment of respiratory tract | 1.13e-17 | 27 |
gland of gut | 5.92e-15 | 24 |
thymus | 2.09e-13 | 23 |
neck | 2.09e-13 | 23 |
respiratory system epithelium | 2.09e-13 | 23 |
hemolymphoid system gland | 2.09e-13 | 23 |
pharyngeal epithelium | 2.09e-13 | 23 |
thymic region | 2.09e-13 | 23 |
pharyngeal gland | 2.09e-13 | 23 |
entire pharyngeal arch endoderm | 2.09e-13 | 23 |
thymus primordium | 2.09e-13 | 23 |
early pharyngeal endoderm | 2.09e-13 | 23 |
pharynx | 9.72e-13 | 24 |
upper respiratory tract | 9.72e-13 | 24 |
chordate pharynx | 9.72e-13 | 24 |
pharyngeal arch system | 9.72e-13 | 24 |
pharyngeal region of foregut | 9.72e-13 | 24 |
respiratory system | 1.21e-11 | 42 |
respiratory tract | 1.79e-10 | 41 |
hemopoietic organ | 4.25e-10 | 29 |
immune organ | 4.25e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 1.48e-09 | 35 |
gut epithelium | 1.51e-09 | 55 |
craniocervical region | 5.05e-09 | 36 |
blastocyst | 5.11e-09 | 3 |
blastula | 5.11e-09 | 3 |
cleaving embryo | 5.11e-09 | 3 |
trachea | 6.77e-08 | 3 |
respiratory airway | 6.77e-08 | 3 |
tracheobronchial tree | 6.77e-08 | 3 |
lower respiratory tract | 6.77e-08 | 3 |
unilaminar epithelium | 2.51e-07 | 66 |
anterior region of body | 4.13e-07 | 43 |
endo-epithelium | 7.58e-07 | 69 |