FFCP PHASE1:Mm9::chr1:132558101..132558116,-: Difference between revisions
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{{FFCP|EntrezGene=12269|HGNC=|MCL_coexpression_id=9|UniProt=E9PUZ8|association_with_transcript=70bp_to_ENSMUST00000137276_5end|description=CAGE_peak_3_at_C4bp_5end|id=chr1:132558101..132558116,-|ontology_enrichment_celltype=CL:0000181!3.38e-07!5;CL:0000417!3.38e-07!5;CL:0000668!3.38e-07!5;CL:0000412!3.38e-07!5;CL:0000182!3.38e-07!5|ontology_enrichment_celltype_v019_2=CL:0000182,1.66e-09,5;CL:0000192,9.76e-09,3;CL:0000359,9.76e-09,3;CL:0002539,9.76e-09,3;CL:0000514,9.76e-09,3;CL:0000066,3.59e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.90e-21!22;UBERON:0007499!1.90e-21!22;UBERON:0006925!1.90e-21!22;UBERON:0009497!1.90e-21!22;UBERON:0000015!1.90e-21!22;UBERON:0002423!1.90e-21!22;UBERON:0006235!1.90e-21!22;UBERON:0008835!1.90e-21!22;UBERON:0003894!1.90e-21!22;UBERON:0004161!1.90e-21!22;UBERON:0008836!1.90e-21!22;UBERON:0009854!3.27e-20!23;UBERON:0009856!3.27e-20!23;UBERON:0002365!4.84e-18!25;UBERON:0002330!4.84e-18!25;UBERON:0005256!8.83e-15!47;UBERON:0003914!2.45e-12!47;UBERON:0005172!5.85e-12!49;UBERON:0005173!5.85e-12!49;UBERON:0002417!5.85e-12!49;UBERON:0000916!5.85e-12!49;UBERON:0003929!1.74e-09!55;UBERON:0000490!2.68e-09!66;UBERON:0005057!5.63e-07!51;UBERON:0009569!6.48e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.86e-30,22;UBERON:0007499,1.86e-30,22;UBERON:0006925,1.86e-30,22;UBERON:0009497,1.86e-30,22;UBERON:0000015,1.86e-30,22;UBERON:0002423,1.86e-30,22;UBERON:0006235,1.86e-30,22;UBERON:0008835,1.86e-30,22;UBERON:0003894,1.86e-30,22;UBERON:0004161,1.86e-30,22;UBERON:0008836,1.86e-30,22;UBERON:0009854,5.65e-29,23;UBERON:0009856,5.65e-29,23;UBERON:0002365,2.30e-26,25;UBERON:0002330,2.30e-26,25;UBERON:0005256,5.36e-24,45;UBERON:0003914,8.95e-23,47;UBERON:0003104,1.83e-16,61;UBERON:0009142,1.83e-16,61;UBERON:0000490,6.02e-16,66;UBERON:0005172,1.83e-15,49;UBERON:0005173,1.83e-15,49;UBERON:0002417,1.83e-15,49;UBERON:0000916,1.83e-15,49;UBERON:0003929,1.95e-14,55;UBERON:0005911,1.18e-10,69;UBERON:0009569,1.97e-10,66;UBERON:0002100,1.20e-09,90;UBERON:0002368,6.84e-09,60;UBERON:0001135,9.76e-09,3;UBERON:0004237,9.76e-09,3;UBERON:0004695,9.76e-09,3;UBERON:0002111,9.76e-09,3;UBERON:0004178,9.76e-09,3;UBERON:0005177,4.66e-08,79;UBERON:0002530,6.11e-08,65;UBERON:0000949,7.77e-07,72;UBERON:0001041,9.87e-07,80|phase1_expression=0,1.39590163055744,1.36499771816861,0,0,0.503637815735669,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0.639969691173627,0,2.29692785646008,1.7230479846363,0.646413698057667,0.380046838912748,0.252030129759931,2.43903561720835,0,0,0,0,0,0,0,0,0,0,0,0,3.02152363141385,2.53442328048786,6.9747765821439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,11.185510400758,23.1190253460635,12.4131734076698,20.1430689408777,7.16843019355737,4.35377702408431,0,0,0,0,0,0,0,0,0,0,13.245330047411,0,0,0,0,0,0,0,0.502666365318702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,54.3658461566107,477.898736198079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0.210407459670956,0.126473074248515,0,0,0,32.0168837254121,0.166845105716094,0,0,0.608580364165509,0.241177159752417,1.52775511068852,2.01387296215567,1.78348749452539,9.88421087477093,40.2550978276593,23.0727387554472,41.5010105242366,70.4695069472442,54.8956085377051,54.0336743926971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0.539457385539283,3.05817786183743,0.523511883968059,0.129614973291793,0,0,0,0,0,0,0,0,0.39061315453185,0,0,1.15212002503146,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,0,0.187682475451182,0.549454872801795,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0,0,0.320919209591815,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0,1.12228454331548,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0.441182838239031,0.463735671240843|short_description=p3@C4bp}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12269 | |||
|HGNC= | |||
|MCL_coexpression_id=9 | |||
|TSSclassifier=NA | |||
|UniProt=E9PUZ8 | |||
|association_with_transcript=70bp_to_ENSMUST00000137276_5end | |||
|cluster_id=chr1:132558101..132558116,- | |||
|description=CAGE_peak_3_at_C4bp_5end | |||
|id=chr1:132558101..132558116,- | |||
|ontology_enrichment_celltype=CL:0000181!3.38e-07!5;CL:0000417!3.38e-07!5;CL:0000668!3.38e-07!5;CL:0000412!3.38e-07!5;CL:0000182!3.38e-07!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.66e-09,5;CL:0000192,9.76e-09,3;CL:0000359,9.76e-09,3;CL:0002539,9.76e-09,3;CL:0000514,9.76e-09,3;CL:0000066,3.59e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.90e-21!22;UBERON:0007499!1.90e-21!22;UBERON:0006925!1.90e-21!22;UBERON:0009497!1.90e-21!22;UBERON:0000015!1.90e-21!22;UBERON:0002423!1.90e-21!22;UBERON:0006235!1.90e-21!22;UBERON:0008835!1.90e-21!22;UBERON:0003894!1.90e-21!22;UBERON:0004161!1.90e-21!22;UBERON:0008836!1.90e-21!22;UBERON:0009854!3.27e-20!23;UBERON:0009856!3.27e-20!23;UBERON:0002365!4.84e-18!25;UBERON:0002330!4.84e-18!25;UBERON:0005256!8.83e-15!47;UBERON:0003914!2.45e-12!47;UBERON:0005172!5.85e-12!49;UBERON:0005173!5.85e-12!49;UBERON:0002417!5.85e-12!49;UBERON:0000916!5.85e-12!49;UBERON:0003929!1.74e-09!55;UBERON:0000490!2.68e-09!66;UBERON:0005057!5.63e-07!51;UBERON:0009569!6.48e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.86e-30,22;UBERON:0007499,1.86e-30,22;UBERON:0006925,1.86e-30,22;UBERON:0009497,1.86e-30,22;UBERON:0000015,1.86e-30,22;UBERON:0002423,1.86e-30,22;UBERON:0006235,1.86e-30,22;UBERON:0008835,1.86e-30,22;UBERON:0003894,1.86e-30,22;UBERON:0004161,1.86e-30,22;UBERON:0008836,1.86e-30,22;UBERON:0009854,5.65e-29,23;UBERON:0009856,5.65e-29,23;UBERON:0002365,2.30e-26,25;UBERON:0002330,2.30e-26,25;UBERON:0005256,5.36e-24,45;UBERON:0003914,8.95e-23,47;UBERON:0003104,1.83e-16,61;UBERON:0009142,1.83e-16,61;UBERON:0000490,6.02e-16,66;UBERON:0005172,1.83e-15,49;UBERON:0005173,1.83e-15,49;UBERON:0002417,1.83e-15,49;UBERON:0000916,1.83e-15,49;UBERON:0003929,1.95e-14,55;UBERON:0005911,1.18e-10,69;UBERON:0009569,1.97e-10,66;UBERON:0002100,1.20e-09,90;UBERON:0002368,6.84e-09,60;UBERON:0001135,9.76e-09,3;UBERON:0004237,9.76e-09,3;UBERON:0004695,9.76e-09,3;UBERON:0002111,9.76e-09,3;UBERON:0004178,9.76e-09,3;UBERON:0005177,4.66e-08,79;UBERON:0002530,6.11e-08,65;UBERON:0000949,7.77e-07,72;UBERON:0001041,9.87e-07,80 | |||
|phase1_expression=0,1.39590163055744,1.36499771816861,0,0,0.503637815735669,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0.639969691173627,0,2.29692785646008,1.7230479846363,0.646413698057667,0.380046838912748,0.252030129759931,2.43903561720835,0,0,0,0,0,0,0,0,0,0,0,0,3.02152363141385,2.53442328048786,6.9747765821439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,11.185510400758,23.1190253460635,12.4131734076698,20.1430689408777,7.16843019355737,4.35377702408431,0,0,0,0,0,0,0,0,0,0,13.245330047411,0,0,0,0,0,0,0,0.502666365318702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,54.3658461566107,477.898736198079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0.210407459670956,0.126473074248515,0,0,0,32.0168837254121,0.166845105716094,0,0,0.608580364165509,0.241177159752417,1.52775511068852,2.01387296215567,1.78348749452539,9.88421087477093,40.2550978276593,23.0727387554472,41.5010105242366,70.4695069472442,54.8956085377051,54.0336743926971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0.539457385539283,3.05817786183743,0.523511883968059,0.129614973291793,0,0,0,0,0,0,0,0,0.39061315453185,0,0,1.15212002503146,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,0,0.187682475451182,0.549454872801795,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0,0,0.320919209591815,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0,1.12228454331548,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0.441182838239031,0.463735671240843 | |||
|short_description=p3@C4bp | |||
}} |
Latest revision as of 07:56, 26 September 2015
Short description: | p3@C4bp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_C4bp_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | 70bp_to_ENSMUST00000137276_5end |
EntrezGene: | C4bp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.66e-09 | 5 |
smooth muscle cell | 9.76e-09 | 3 |
vascular associated smooth muscle cell | 9.76e-09 | 3 |
aortic smooth muscle cell | 9.76e-09 | 3 |
smooth muscle myoblast | 9.76e-09 | 3 |
epithelial cell | 3.59e-07 | 25 |