FFCP PHASE1:Mm9::chr7:25155103..25155112,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16534 | |EntrezGene=16534 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=319 | |MCL_coexpression_id=319 | ||
|TSSclassifier=NA | |||
|UniProt=O89109 | |UniProt=O89109 | ||
|association_with_transcript=-169bp_to_ENSMUST00000067352,ENSMUST00000171904,NM_001163510,NM_008433,uc009fpk.2,uc009fpl.2_5end | |association_with_transcript=-169bp_to_ENSMUST00000067352,ENSMUST00000171904,NM_001163510,NM_008433,uc009fpk.2,uc009fpl.2_5end | ||
|cluster_id=chr7:25155103..25155112,+ | |||
|description=CAGE_peak_10_at_Kcnn4_5end | |description=CAGE_peak_10_at_Kcnn4_5end | ||
|id=chr7:25155103..25155112,+ | |id=chr7:25155103..25155112,+ | ||
|ontology_enrichment_celltype=CL:0000624!1.90e-12!8;CL:0000791!7.96e-11!9;CL:0000789!7.96e-11!9;CL:0002420!7.96e-11!9;CL:0002419!7.96e-11!9;CL:0000790!7.96e-11!9;CL:0000893!9.93e-10!6;CL:0002489!9.93e-10!6;CL:0000898!9.93e-10!6;CL:0000809!9.93e-10!6;CL:0000810!9.93e-10!6;CL:0000895!9.93e-10!6;CL:0000808!9.93e-10!6;CL:0000894!9.93e-10!6;CL:0000806!9.93e-10!6;CL:0000807!9.93e-10!6;CL:0000805!9.93e-10!6;CL:0002425!9.93e-10!6;CL:0002436!9.93e-10!6;CL:0002427!9.93e-10!6;CL:0002428!9.93e-10!6;CL:0002429!9.93e-10!6;CL:0002433!9.93e-10!6;CL:0002431!9.93e-10!6;CL:0002432!9.93e-10!6;CL:0000084!1.78e-08!11;CL:0000827!1.78e-08!11;CL:0000988!1.10e-07!32;CL:0002032!1.10e-07!32;CL:0000037!1.10e-07!32;CL:0000566!1.10e-07!32;CL:0000837!1.10e-07!32;CL:0000838!1.33e-07!12;CL:0002031!3.98e-07!25;CL:0000542!7.29e-07!13;CL:0000051!7.29e-07!13 | |ontology_enrichment_celltype=CL:0000624!1.90e-12!8;CL:0000791!7.96e-11!9;CL:0000789!7.96e-11!9;CL:0002420!7.96e-11!9;CL:0002419!7.96e-11!9;CL:0000790!7.96e-11!9;CL:0000893!9.93e-10!6;CL:0002489!9.93e-10!6;CL:0000898!9.93e-10!6;CL:0000809!9.93e-10!6;CL:0000810!9.93e-10!6;CL:0000895!9.93e-10!6;CL:0000808!9.93e-10!6;CL:0000894!9.93e-10!6;CL:0000806!9.93e-10!6;CL:0000807!9.93e-10!6;CL:0000805!9.93e-10!6;CL:0002425!9.93e-10!6;CL:0002436!9.93e-10!6;CL:0002427!9.93e-10!6;CL:0002428!9.93e-10!6;CL:0002429!9.93e-10!6;CL:0002433!9.93e-10!6;CL:0002431!9.93e-10!6;CL:0002432!9.93e-10!6;CL:0000084!1.78e-08!11;CL:0000827!1.78e-08!11;CL:0000988!1.10e-07!32;CL:0002032!1.10e-07!32;CL:0000037!1.10e-07!32;CL:0000566!1.10e-07!32;CL:0000837!1.10e-07!32;CL:0000838!1.33e-07!12;CL:0002031!3.98e-07!25;CL:0000542!7.29e-07!13;CL:0000051!7.29e-07!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,7.45e-40,8;CL:0000893,5.82e-37,6;CL:0002489,5.82e-37,6;CL:0000898,5.82e-37,6;CL:0000809,5.82e-37,6;CL:0000810,5.82e-37,6;CL:0000895,5.82e-37,6;CL:0000808,5.82e-37,6;CL:0000894,5.82e-37,6;CL:0000806,5.82e-37,6;CL:0000807,5.82e-37,6;CL:0000805,5.82e-37,6;CL:0002425,5.82e-37,6;CL:0002436,5.82e-37,6;CL:0002427,5.82e-37,6;CL:0002428,5.82e-37,6;CL:0002429,5.82e-37,6;CL:0002433,5.82e-37,6;CL:0002431,5.82e-37,6;CL:0002432,5.82e-37,6;CL:0000791,1.92e-35,9;CL:0000789,1.92e-35,9;CL:0002420,1.92e-35,9;CL:0002419,1.92e-35,9;CL:0000790,1.92e-35,9;CL:0000084,5.10e-29,11;CL:0000827,5.10e-29,11;CL:0000838,1.31e-26,12;CL:0000542,1.45e-24,13;CL:0000051,1.45e-24,13;CL:0000738,8.61e-19,17;CL:0002087,8.61e-19,17;CL:0002031,9.20e-13,25;CL:0000815,2.01e-10,1;CL:0000792,2.01e-10,1;CL:0000988,6.04e-10,32;CL:0002032,6.04e-10,32;CL:0000037,6.04e-10,32;CL:0000837,6.04e-10,32;CL:0002320,7.31e-07,46;CL:0000134,7.31e-07,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!9.69e-18!70;UBERON:0002193!4.18e-16!48;UBERON:0005057!6.08e-16!51;UBERON:0004177!1.06e-15!29;UBERON:0002390!7.51e-15!45;UBERON:0003061!7.51e-15!45;UBERON:0006562!3.71e-12!24;UBERON:0001557!3.71e-12!24;UBERON:0001042!3.71e-12!24;UBERON:0008814!3.71e-12!24;UBERON:0009145!3.71e-12!24;UBERON:0002370!2.34e-11!23;UBERON:0000974!2.34e-11!23;UBERON:0004807!2.34e-11!23;UBERON:0005058!2.34e-11!23;UBERON:0003351!2.34e-11!23;UBERON:0009113!2.34e-11!23;UBERON:0003295!2.34e-11!23;UBERON:0009722!2.34e-11!23;UBERON:0005562!2.34e-11!23;UBERON:0007690!2.34e-11!23;UBERON:0003408!1.07e-10!24;UBERON:0000072!2.80e-10!27;UBERON:0002368!7.08e-10!60;UBERON:0003929!1.75e-09!55;UBERON:0002530!1.51e-08!65;UBERON:0003081!3.06e-07!88;UBERON:0000949!5.06e-07!72;UBERON:0000063!6.56e-07!35;UBERON:0005911!7.65e-07!69;UBERON:0000490!8.73e-07!66 | |ontology_enrichment_uberon=UBERON:0002405!9.69e-18!70;UBERON:0002193!4.18e-16!48;UBERON:0005057!6.08e-16!51;UBERON:0004177!1.06e-15!29;UBERON:0002390!7.51e-15!45;UBERON:0003061!7.51e-15!45;UBERON:0006562!3.71e-12!24;UBERON:0001557!3.71e-12!24;UBERON:0001042!3.71e-12!24;UBERON:0008814!3.71e-12!24;UBERON:0009145!3.71e-12!24;UBERON:0002370!2.34e-11!23;UBERON:0000974!2.34e-11!23;UBERON:0004807!2.34e-11!23;UBERON:0005058!2.34e-11!23;UBERON:0003351!2.34e-11!23;UBERON:0009113!2.34e-11!23;UBERON:0003295!2.34e-11!23;UBERON:0009722!2.34e-11!23;UBERON:0005562!2.34e-11!23;UBERON:0007690!2.34e-11!23;UBERON:0003408!1.07e-10!24;UBERON:0000072!2.80e-10!27;UBERON:0002368!7.08e-10!60;UBERON:0003929!1.75e-09!55;UBERON:0002530!1.51e-08!65;UBERON:0003081!3.06e-07!88;UBERON:0000949!5.06e-07!72;UBERON:0000063!6.56e-07!35;UBERON:0005911!7.65e-07!69;UBERON:0000490!8.73e-07!66 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.01e-13,23;UBERON:0000974,1.01e-13,23;UBERON:0004807,1.01e-13,23;UBERON:0005058,1.01e-13,23;UBERON:0003351,1.01e-13,23;UBERON:0009113,1.01e-13,23;UBERON:0003295,1.01e-13,23;UBERON:0009722,1.01e-13,23;UBERON:0005562,1.01e-13,23;UBERON:0007690,1.01e-13,23;UBERON:0006562,3.81e-13,24;UBERON:0003408,3.81e-13,24;UBERON:0001557,3.81e-13,24;UBERON:0001042,3.81e-13,24;UBERON:0008814,3.81e-13,24;UBERON:0009145,3.81e-13,24;UBERON:0000072,1.12e-11,27;UBERON:0004177,7.31e-11,29;UBERON:0005057,7.31e-11,29;UBERON:0003929,8.39e-10,55;UBERON:0000077,5.62e-09,35;UBERON:0002368,6.01e-09,60;UBERON:0007811,1.01e-08,36;UBERON:0002530,3.19e-08,65;UBERON:0000490,4.33e-08,66;UBERON:0005911,1.02e-07,69;UBERON:0000065,1.23e-07,41;UBERON:0001004,1.89e-07,42;UBERON:0000949,2.25e-07,72;UBERON:0000153,2.84e-07,43;UBERON:0002390,6.11e-07,45;UBERON:0003061,6.11e-07,45;UBERON:0002384,7.31e-07,46 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0,5.55230290798778,1.68946466582,8.42632294759177,1.19852577757853,2.07407613387875,0.342401459862411,5.24522414513984,0.333109761815663,0.809901069559304,0.699561878128147,0.157731082679119,0.137114433605739,0,0,0,0,0.319984845586813,0.45881856213434,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0,0,0,0,0,1.76922110389975,0.161766849947409,0.662524555381181,0.484875253135222,0,0,0,0,0.359445373517761,0,0.254140454146129,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83422552858047,0.393117990226406,0.899448449539415,1.21716072833102,0.964708639009667,1.01850340712568,0.863088412352432,0,0.549122826376163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0.185194527369712,0.941842285023455,0.683471138605126,0.686334519619568,0.509935289981566,0.69975726161829,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0.358053391334963,1.19208812868759,0.240390899039938,0.147689527174577,0.100966449948148,0.15241361331,0,0,0.481059208201647,0.701261413089414,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0.561142271657738,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0.33575854382378,0,5.55230290798778,1.68946466582,8.42632294759177,1.19852577757853,2.07407613387875,0.342401459862411,5.24522414513984,0.333109761815663,0.809901069559304,0.699561878128147,0.157731082679119,0.137114433605739,0,0,0,0,0.319984845586813,0.45881856213434,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0,0,0,0,0,1.76922110389975,0.161766849947409,0.662524555381181,0.484875253135222,0,0,0,0,0.359445373517761,0,0.254140454146129,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83422552858047,0.393117990226406,0.899448449539415,1.21716072833102,0.964708639009667,1.01850340712568,0.863088412352432,0,0.549122826376163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0.185194527369712,0.941842285023455,0.683471138605126,0.686334519619568,0.509935289981566,0.69975726161829,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0.358053391334963,1.19208812868759,0.240390899039938,0.147689527174577,0.100966449948148,0.15241361331,0,0,0.481059208201647,0.701261413089414,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0.561142271657738,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p10@Kcnn4 | |short_description=p10@Kcnn4 | ||
}} | }} |
Latest revision as of 09:23, 26 September 2015
Short description: | p10@Kcnn4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Kcnn4_5end |
Coexpression cluster: | MCL_coexpression_mm9:319 |
Association with transcript: | -169bp_to_ENSMUST00000067352, ENSMUST00000171904, NM_001163510, NM_008433, uc009fpk.2, uc009fpl.2_5end |
EntrezGene: | Kcnn4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.01e-13 | 23 |
neck | 1.01e-13 | 23 |
respiratory system epithelium | 1.01e-13 | 23 |
hemolymphoid system gland | 1.01e-13 | 23 |
pharyngeal epithelium | 1.01e-13 | 23 |
thymic region | 1.01e-13 | 23 |
pharyngeal gland | 1.01e-13 | 23 |
entire pharyngeal arch endoderm | 1.01e-13 | 23 |
thymus primordium | 1.01e-13 | 23 |
early pharyngeal endoderm | 1.01e-13 | 23 |
pharynx | 3.81e-13 | 24 |
gland of gut | 3.81e-13 | 24 |
upper respiratory tract | 3.81e-13 | 24 |
chordate pharynx | 3.81e-13 | 24 |
pharyngeal arch system | 3.81e-13 | 24 |
pharyngeal region of foregut | 3.81e-13 | 24 |
segment of respiratory tract | 1.12e-11 | 27 |
hemopoietic organ | 7.31e-11 | 29 |
immune organ | 7.31e-11 | 29 |
gut epithelium | 8.39e-10 | 55 |
mixed endoderm/mesoderm-derived structure | 5.62e-09 | 35 |
endocrine gland | 6.01e-09 | 60 |
craniocervical region | 1.01e-08 | 36 |
gland | 3.19e-08 | 65 |
unilaminar epithelium | 4.33e-08 | 66 |
endo-epithelium | 1.02e-07 | 69 |
respiratory tract | 1.23e-07 | 41 |
respiratory system | 1.89e-07 | 42 |
endocrine system | 2.25e-07 | 72 |
anterior region of body | 2.84e-07 | 43 |
hematopoietic system | 6.11e-07 | 45 |
blood island | 6.11e-07 | 45 |
connective tissue | 7.31e-07 | 46 |