FFCP PHASE1:Mm9::chr4:133799669..133799683,+: Difference between revisions
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|id=chr4:133799669..133799683,+
|short_description=p1@E130218I03Rik
|description=CAGE_peak_1_at_E130218I03Rik_5end
|association_with_transcript=0bp_to_ENSMUST000001...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=77490 | |EntrezGene=77490 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=16 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000124452,ENSMUST00000144222,NR_040435,NR_040436,uc008vel.1,uc008vem.1,uc008ven.1_5end | |||
|cluster_id=chr4:133799669..133799683,+ | |||
|description=CAGE_peak_1_at_E130218I03Rik_5end | |||
|id=chr4:133799669..133799683,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.04e-29!9;UBERON:0000019!1.04e-29!9;UBERON:0000047!1.04e-29!9;UBERON:0004088!1.04e-29!9;UBERON:0002104!1.04e-29!9;UBERON:0001456!1.04e-29!9;UBERON:0003072!1.04e-29!9;UBERON:0003071!1.04e-29!9;UBERON:0004128!1.04e-29!9;UBERON:0001444!5.17e-24!11;UBERON:0000020!7.10e-22!12;UBERON:0001032!7.10e-22!12;UBERON:0004456!7.10e-22!12;UBERON:0005085!4.57e-20!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.31e-86,9;UBERON:0000019,1.31e-86,9;UBERON:0000047,1.31e-86,9;UBERON:0010312,1.31e-86,9;UBERON:0004088,1.31e-86,9;UBERON:0002104,1.31e-86,9;UBERON:0001456,1.31e-86,9;UBERON:0003072,1.31e-86,9;UBERON:0004128,1.31e-86,9;UBERON:0003071,1.31e-86,9;UBERON:0001444,6.78e-71,11;UBERON:0000020,5.33e-65,12;UBERON:0001032,5.33e-65,12;UBERON:0004456,5.33e-65,12;UBERON:0000033,5.21e-60,13;UBERON:0005085,5.21e-60,13;UBERON:0007811,1.17e-21,36;UBERON:0000153,4.15e-18,43;UBERON:0003056,7.21e-16,49;UBERON:0002346,4.30e-12,64;UBERON:0003075,4.30e-12,64;UBERON:0007284,4.30e-12,64;UBERON:0010371,1.45e-10,73;UBERON:0010314,2.60e-08,92;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.0867664391378,3.513251959993,9.65588838620586,10.9837899181263,9.0422890701429,14.6958838166868,21.3949912875699,29.9845518591132,107.361898856691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0,0.367687016900028,0,0,0,0,0.50695859978048,0.565879024158229,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0.476872379894642,0.145346416632329,0,0.0846146078916765,0.365855945745545,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.0867664391378,3.513251959993,9.65588838620586,10.9837899181263,9.0422890701429,14.6958838166868,21.3949912875699,29.9845518591132,107.361898856691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0,0.367687016900028,0,0,0,0,0.50695859978048,0.565879024158229,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0.476872379894642,0.145346416632329,0,0.0846146078916765,0.365855945745545,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0 | ||
|short_description=p1@E130218I03Rik | |||
}} | }} |
Latest revision as of 12:06, 26 September 2015
Short description: | p1@E130218I03Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_E130218I03Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | 0bp_to_ENSMUST00000124452, ENSMUST00000144222, NR_040435, NR_040436, uc008vel.1, uc008vem.1, uc008ven.1_5end |
EntrezGene: | E130218I03Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.31e-86 | 9 |
camera-type eye | 1.31e-86 | 9 |
simple eye | 1.31e-86 | 9 |
immature eye | 1.31e-86 | 9 |
ocular region | 1.31e-86 | 9 |
visual system | 1.31e-86 | 9 |
face | 1.31e-86 | 9 |
optic cup | 1.31e-86 | 9 |
optic vesicle | 1.31e-86 | 9 |
eye primordium | 1.31e-86 | 9 |
subdivision of head | 6.78e-71 | 11 |
sense organ | 5.33e-65 | 12 |
sensory system | 5.33e-65 | 12 |
entire sense organ system | 5.33e-65 | 12 |
head | 5.21e-60 | 13 |
ectodermal placode | 5.21e-60 | 13 |
craniocervical region | 1.17e-21 | 36 |
anterior region of body | 4.15e-18 | 43 |
pre-chordal neural plate | 7.21e-16 | 49 |
neurectoderm | 4.30e-12 | 64 |
neural plate | 4.30e-12 | 64 |
presumptive neural plate | 4.30e-12 | 64 |
ecto-epithelium | 1.45e-10 | 73 |
structure with developmental contribution from neural crest | 2.60e-08 | 92 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |