FFCP PHASE1:Mm9::chr7:31208400..31208427,+: Difference between revisions
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{{FFCP|EntrezGene=243910|HGNC=|MCL_coexpression_id=7|UniProt=Q2TB02|association_with_transcript=77bp_to_NM_172142,uc009gej.1_5end|description=CAGE_peak_5_at_Nfkbid_5end|id=chr7:31208400..31208427,+|ontology_enrichment_celltype=CL:0000838!4.29e-22!12;CL:0000791!2.83e-21!9;CL:0000789!2.83e-21!9;CL:0002420!2.83e-21!9;CL:0002419!2.83e-21!9;CL:0000790!2.83e-21!9;CL:0000084!1.91e-20!11;CL:0000827!1.91e-20!11;CL:0000542!3.40e-20!13;CL:0000051!3.40e-20!13;CL:0000624!4.15e-19!8;CL:0000988!5.36e-19!32;CL:0002032!5.36e-19!32;CL:0000037!5.36e-19!32;CL:0000566!5.36e-19!32;CL:0000837!5.36e-19!32;CL:0000738!6.51e-18!17;CL:0002087!6.51e-18!17;CL:0002031!1.69e-17!25;CL:0002320!3.19e-15!46;CL:0000134!3.19e-15!46;CL:0000893!8.01e-15!6;CL:0002489!8.01e-15!6;CL:0000898!8.01e-15!6;CL:0000809!8.01e-15!6;CL:0000810!8.01e-15!6;CL:0000895!8.01e-15!6;CL:0000808!8.01e-15!6;CL:0000894!8.01e-15!6;CL:0000806!8.01e-15!6;CL:0000807!8.01e-15!6;CL:0000805!8.01e-15!6;CL:0002425!8.01e-15!6;CL:0002436!8.01e-15!6;CL:0002427!8.01e-15!6;CL:0002428!8.01e-15!6;CL:0002429!8.01e-15!6;CL:0002433!8.01e-15!6;CL:0002431!8.01e-15!6;CL:0002432!8.01e-15!6;CL:0000219!3.11e-12!54;CL:0000063!2.15e-11!66;CL:0000034!6.29e-08!97|ontology_enrichment_celltype_v019_2=CL:0000791,5.00e-39,9;CL:0000789,5.00e-39,9;CL:0002420,5.00e-39,9;CL:0002419,5.00e-39,9;CL:0000790,5.00e-39,9;CL:0000084,5.66e-32,11;CL:0000827,5.66e-32,11;CL:0000624,5.38e-31,8;CL:0000838,2.52e-29,12;CL:0000738,5.43e-28,17;CL:0002087,5.43e-28,17;CL:0000542,4.40e-27,13;CL:0000051,4.40e-27,13;CL:0000893,5.91e-27,6;CL:0002489,5.91e-27,6;CL:0000898,5.91e-27,6;CL:0000809,5.91e-27,6;CL:0000810,5.91e-27,6;CL:0000895,5.91e-27,6;CL:0000808,5.91e-27,6;CL:0000894,5.91e-27,6;CL:0000806,5.91e-27,6;CL:0000807,5.91e-27,6;CL:0000805,5.91e-27,6;CL:0002425,5.91e-27,6;CL:0002436,5.91e-27,6;CL:0002427,5.91e-27,6;CL:0002428,5.91e-27,6;CL:0002429,5.91e-27,6;CL:0002433,5.91e-27,6;CL:0002431,5.91e-27,6;CL:0002432,5.91e-27,6;CL:0000988,2.91e-19,32;CL:0002032,2.91e-19,32;CL:0000037,2.91e-19,32;CL:0000837,2.91e-19,32;CL:0002031,4.92e-19,25;CL:0002320,2.39e-13,46;CL:0000134,2.39e-13,46;CL:0000219,2.46e-11,54;CL:0000625,1.12e-10,1;CL:0000034,7.32e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.60e-17!45;UBERON:0003061!9.60e-17!45;UBERON:0002193!2.25e-15!48;UBERON:0002384!3.19e-15!46;UBERON:0004177!6.90e-14!29;UBERON:0002370!7.90e-14!23;UBERON:0000974!7.90e-14!23;UBERON:0004807!7.90e-14!23;UBERON:0005058!7.90e-14!23;UBERON:0003351!7.90e-14!23;UBERON:0009113!7.90e-14!23;UBERON:0003295!7.90e-14!23;UBERON:0009722!7.90e-14!23;UBERON:0005562!7.90e-14!23;UBERON:0007690!7.90e-14!23;UBERON:0006562!3.99e-13!24;UBERON:0003408!3.99e-13!24;UBERON:0001557!3.99e-13!24;UBERON:0001042!3.99e-13!24;UBERON:0008814!3.99e-13!24;UBERON:0009145!3.99e-13!24;UBERON:0000072!2.47e-11!27;UBERON:0002405!4.20e-10!70;UBERON:0000063!4.49e-08!35;UBERON:0003081!6.79e-08!88;UBERON:0000065!1.48e-07!41;UBERON:0005057!1.67e-07!51;UBERON:0001004!2.64e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.39e-13,46;UBERON:0002370,2.56e-07,23;UBERON:0000974,2.56e-07,23;UBERON:0004807,2.56e-07,23;UBERON:0005058,2.56e-07,23;UBERON:0003351,2.56e-07,23;UBERON:0009113,2.56e-07,23;UBERON:0003295,2.56e-07,23;UBERON:0009722,2.56e-07,23;UBERON:0005562,2.56e-07,23;UBERON:0007690,2.56e-07,23;UBERON:0006562,5.04e-07,24;UBERON:0003408,5.04e-07,24;UBERON:0001557,5.04e-07,24;UBERON:0001042,5.04e-07,24;UBERON:0008814,5.04e-07,24;UBERON:0009145,5.04e-07,24|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.903863264091034,214.702801281292,355.544015483108,9.58820622062828,9.73220339743104,0.856003649656029,0.611942816932982,0.333109761815663,0,0,0.157731082679119,0.137114433605739,0,0,0.0992909512008853,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,1.45072428402269,1.00828139742739,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,1.19980546198682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0,0,0,0.679913719975421,1.53946597556024,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0,0,0,0.304827226619999,0.201652370273681,0.0974578807397524,0.384847366561318,0.233753804363138,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@Nfkbid}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=243910 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=Q2TB02 | |||
|association_with_transcript=77bp_to_NM_172142,uc009gej.1_5end | |||
|cluster_id=chr7:31208400..31208427,+ | |||
|description=CAGE_peak_5_at_Nfkbid_5end | |||
|id=chr7:31208400..31208427,+ | |||
|ontology_enrichment_celltype=CL:0000838!4.29e-22!12;CL:0000791!2.83e-21!9;CL:0000789!2.83e-21!9;CL:0002420!2.83e-21!9;CL:0002419!2.83e-21!9;CL:0000790!2.83e-21!9;CL:0000084!1.91e-20!11;CL:0000827!1.91e-20!11;CL:0000542!3.40e-20!13;CL:0000051!3.40e-20!13;CL:0000624!4.15e-19!8;CL:0000988!5.36e-19!32;CL:0002032!5.36e-19!32;CL:0000037!5.36e-19!32;CL:0000566!5.36e-19!32;CL:0000837!5.36e-19!32;CL:0000738!6.51e-18!17;CL:0002087!6.51e-18!17;CL:0002031!1.69e-17!25;CL:0002320!3.19e-15!46;CL:0000134!3.19e-15!46;CL:0000893!8.01e-15!6;CL:0002489!8.01e-15!6;CL:0000898!8.01e-15!6;CL:0000809!8.01e-15!6;CL:0000810!8.01e-15!6;CL:0000895!8.01e-15!6;CL:0000808!8.01e-15!6;CL:0000894!8.01e-15!6;CL:0000806!8.01e-15!6;CL:0000807!8.01e-15!6;CL:0000805!8.01e-15!6;CL:0002425!8.01e-15!6;CL:0002436!8.01e-15!6;CL:0002427!8.01e-15!6;CL:0002428!8.01e-15!6;CL:0002429!8.01e-15!6;CL:0002433!8.01e-15!6;CL:0002431!8.01e-15!6;CL:0002432!8.01e-15!6;CL:0000219!3.11e-12!54;CL:0000063!2.15e-11!66;CL:0000034!6.29e-08!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.00e-39,9;CL:0000789,5.00e-39,9;CL:0002420,5.00e-39,9;CL:0002419,5.00e-39,9;CL:0000790,5.00e-39,9;CL:0000084,5.66e-32,11;CL:0000827,5.66e-32,11;CL:0000624,5.38e-31,8;CL:0000838,2.52e-29,12;CL:0000738,5.43e-28,17;CL:0002087,5.43e-28,17;CL:0000542,4.40e-27,13;CL:0000051,4.40e-27,13;CL:0000893,5.91e-27,6;CL:0002489,5.91e-27,6;CL:0000898,5.91e-27,6;CL:0000809,5.91e-27,6;CL:0000810,5.91e-27,6;CL:0000895,5.91e-27,6;CL:0000808,5.91e-27,6;CL:0000894,5.91e-27,6;CL:0000806,5.91e-27,6;CL:0000807,5.91e-27,6;CL:0000805,5.91e-27,6;CL:0002425,5.91e-27,6;CL:0002436,5.91e-27,6;CL:0002427,5.91e-27,6;CL:0002428,5.91e-27,6;CL:0002429,5.91e-27,6;CL:0002433,5.91e-27,6;CL:0002431,5.91e-27,6;CL:0002432,5.91e-27,6;CL:0000988,2.91e-19,32;CL:0002032,2.91e-19,32;CL:0000037,2.91e-19,32;CL:0000837,2.91e-19,32;CL:0002031,4.92e-19,25;CL:0002320,2.39e-13,46;CL:0000134,2.39e-13,46;CL:0000219,2.46e-11,54;CL:0000625,1.12e-10,1;CL:0000034,7.32e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.60e-17!45;UBERON:0003061!9.60e-17!45;UBERON:0002193!2.25e-15!48;UBERON:0002384!3.19e-15!46;UBERON:0004177!6.90e-14!29;UBERON:0002370!7.90e-14!23;UBERON:0000974!7.90e-14!23;UBERON:0004807!7.90e-14!23;UBERON:0005058!7.90e-14!23;UBERON:0003351!7.90e-14!23;UBERON:0009113!7.90e-14!23;UBERON:0003295!7.90e-14!23;UBERON:0009722!7.90e-14!23;UBERON:0005562!7.90e-14!23;UBERON:0007690!7.90e-14!23;UBERON:0006562!3.99e-13!24;UBERON:0003408!3.99e-13!24;UBERON:0001557!3.99e-13!24;UBERON:0001042!3.99e-13!24;UBERON:0008814!3.99e-13!24;UBERON:0009145!3.99e-13!24;UBERON:0000072!2.47e-11!27;UBERON:0002405!4.20e-10!70;UBERON:0000063!4.49e-08!35;UBERON:0003081!6.79e-08!88;UBERON:0000065!1.48e-07!41;UBERON:0005057!1.67e-07!51;UBERON:0001004!2.64e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.39e-13,46;UBERON:0002370,2.56e-07,23;UBERON:0000974,2.56e-07,23;UBERON:0004807,2.56e-07,23;UBERON:0005058,2.56e-07,23;UBERON:0003351,2.56e-07,23;UBERON:0009113,2.56e-07,23;UBERON:0003295,2.56e-07,23;UBERON:0009722,2.56e-07,23;UBERON:0005562,2.56e-07,23;UBERON:0007690,2.56e-07,23;UBERON:0006562,5.04e-07,24;UBERON:0003408,5.04e-07,24;UBERON:0001557,5.04e-07,24;UBERON:0001042,5.04e-07,24;UBERON:0008814,5.04e-07,24;UBERON:0009145,5.04e-07,24 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.903863264091034,214.702801281292,355.544015483108,9.58820622062828,9.73220339743104,0.856003649656029,0.611942816932982,0.333109761815663,0,0,0.157731082679119,0.137114433605739,0,0,0.0992909512008853,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,1.45072428402269,1.00828139742739,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,1.19980546198682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0,0,0,0.679913719975421,1.53946597556024,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0,0,0,0.304827226619999,0.201652370273681,0.0974578807397524,0.384847366561318,0.233753804363138,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@Nfkbid | |||
}} |
Latest revision as of 14:36, 26 September 2015
Short description: | p5@Nfkbid |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Nfkbid_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 77bp_to_NM_172142, uc009gej.1_5end |
EntrezGene: | Nfkbid |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.39e-13 | 46 |
thymus | 2.56e-07 | 23 |
neck | 2.56e-07 | 23 |
respiratory system epithelium | 2.56e-07 | 23 |
hemolymphoid system gland | 2.56e-07 | 23 |
pharyngeal epithelium | 2.56e-07 | 23 |
thymic region | 2.56e-07 | 23 |
pharyngeal gland | 2.56e-07 | 23 |
entire pharyngeal arch endoderm | 2.56e-07 | 23 |
thymus primordium | 2.56e-07 | 23 |
early pharyngeal endoderm | 2.56e-07 | 23 |
pharynx | 5.04e-07 | 24 |
gland of gut | 5.04e-07 | 24 |
upper respiratory tract | 5.04e-07 | 24 |
chordate pharynx | 5.04e-07 | 24 |
pharyngeal arch system | 5.04e-07 | 24 |
pharyngeal region of foregut | 5.04e-07 | 24 |