FFCP PHASE1:Mm9::chr6:124790059..124790070,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14695 | |EntrezGene=14695 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=57 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENSMUST00000135996_5end | |association_with_transcript=30bp_to_ENSMUST00000135996_5end | ||
|cluster_id=chr6:124790059..124790070,- | |||
|description=CAGE_peak_3_at_Gnb3_5end | |description=CAGE_peak_3_at_Gnb3_5end | ||
|id=chr6:124790059..124790070,- | |id=chr6:124790059..124790070,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001444!1.19e-08!11;UBERON:0000970!3.09e-08!9;UBERON:0000019!3.09e-08!9;UBERON:0000047!3.09e-08!9;UBERON:0004088!3.09e-08!9;UBERON:0002104!3.09e-08!9;UBERON:0001456!3.09e-08!9;UBERON:0003072!3.09e-08!9;UBERON:0003071!3.09e-08!9;UBERON:0004128!3.09e-08!9;UBERON:0000007!4.87e-08!8;UBERON:0003296!4.87e-08!8;UBERON:0010133!4.87e-08!8;UBERON:0000020!8.20e-08!12;UBERON:0001032!8.20e-08!12;UBERON:0004456!8.20e-08!12;UBERON:0007100!1.15e-07!18;UBERON:0000948!1.15e-07!18;UBERON:0005498!1.15e-07!18;UBERON:0004140!1.15e-07!18;UBERON:0009881!1.15e-07!18;UBERON:0004141!1.15e-07!18;UBERON:0003084!1.15e-07!18;UBERON:0007005!1.15e-07!18;UBERON:0004139!1.15e-07!18;UBERON:0004291!1.15e-07!18 | |ontology_enrichment_uberon=UBERON:0001444!1.19e-08!11;UBERON:0000970!3.09e-08!9;UBERON:0000019!3.09e-08!9;UBERON:0000047!3.09e-08!9;UBERON:0004088!3.09e-08!9;UBERON:0002104!3.09e-08!9;UBERON:0001456!3.09e-08!9;UBERON:0003072!3.09e-08!9;UBERON:0003071!3.09e-08!9;UBERON:0004128!3.09e-08!9;UBERON:0000007!4.87e-08!8;UBERON:0003296!4.87e-08!8;UBERON:0010133!4.87e-08!8;UBERON:0000020!8.20e-08!12;UBERON:0001032!8.20e-08!12;UBERON:0004456!8.20e-08!12;UBERON:0007100!1.15e-07!18;UBERON:0000948!1.15e-07!18;UBERON:0005498!1.15e-07!18;UBERON:0004140!1.15e-07!18;UBERON:0009881!1.15e-07!18;UBERON:0004141!1.15e-07!18;UBERON:0003084!1.15e-07!18;UBERON:0007005!1.15e-07!18;UBERON:0004139!1.15e-07!18;UBERON:0004291!1.15e-07!18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,8.42e-44,9;UBERON:0000019,8.42e-44,9;UBERON:0000047,8.42e-44,9;UBERON:0010312,8.42e-44,9;UBERON:0004088,8.42e-44,9;UBERON:0002104,8.42e-44,9;UBERON:0001456,8.42e-44,9;UBERON:0003072,8.42e-44,9;UBERON:0004128,8.42e-44,9;UBERON:0003071,8.42e-44,9;UBERON:0001444,6.65e-36,11;UBERON:0000020,6.12e-33,12;UBERON:0001032,6.12e-33,12;UBERON:0004456,6.12e-33,12;UBERON:0000033,1.98e-30,13;UBERON:0005085,1.98e-30,13;UBERON:0003056,2.84e-14,49;UBERON:0007811,4.27e-11,36;UBERON:0002346,6.42e-11,64;UBERON:0003075,6.42e-11,64;UBERON:0007284,6.42e-11,64;UBERON:0010371,1.46e-09,73;UBERON:0000153,2.69e-09,43;UBERON:0010314,1.48e-07,92;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.520455980298408,0,0,0,0.352766121407114,0.251333182659351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26265113531884,0,0,0,1.05493372485001,2.24520447199382,2.8185018462667,2.90475346135159,3.88055056108524,0,0,0,0,0,0,0,0,0,0,0,0,0.469052119962192,0.36012412292203,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0.18006109403131,0.388076051348264,0,0.177340233642274,0,0.164549020602121,1.2178597964584,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0,0,0,0.147689527174577,0.100966449948148,0,0.201652370273681,0,0.288635524920988,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0.188626341386076,0,0.0640251524048693,0,0.476293691283074,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0.561142271657738,0.118635018124174,0,0,0,0,0,0,0,0,0.441182838239031,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.520455980298408,0,0,0,0.352766121407114,0.251333182659351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26265113531884,0,0,0,1.05493372485001,2.24520447199382,2.8185018462667,2.90475346135159,3.88055056108524,0,0,0,0,0,0,0,0,0,0,0,0,0.469052119962192,0.36012412292203,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0.18006109403131,0.388076051348264,0,0.177340233642274,0,0.164549020602121,1.2178597964584,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0,0,0,0.147689527174577,0.100966449948148,0,0.201652370273681,0,0.288635524920988,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0.188626341386076,0,0.0640251524048693,0,0.476293691283074,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0.561142271657738,0.118635018124174,0,0,0,0,0,0,0,0,0.441182838239031,0 | ||
|short_description=p3@Gnb3 | |short_description=p3@Gnb3 | ||
}} | }} |
Latest revision as of 16:18, 26 September 2015
Short description: | p3@Gnb3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gnb3_5end |
Coexpression cluster: | MCL_coexpression_mm9:57 |
Association with transcript: | 30bp_to_ENSMUST00000135996_5end |
EntrezGene: | Gnb3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 8.42e-44 | 9 |
camera-type eye | 8.42e-44 | 9 |
simple eye | 8.42e-44 | 9 |
immature eye | 8.42e-44 | 9 |
ocular region | 8.42e-44 | 9 |
visual system | 8.42e-44 | 9 |
face | 8.42e-44 | 9 |
optic cup | 8.42e-44 | 9 |
optic vesicle | 8.42e-44 | 9 |
eye primordium | 8.42e-44 | 9 |
subdivision of head | 6.65e-36 | 11 |
sense organ | 6.12e-33 | 12 |
sensory system | 6.12e-33 | 12 |
entire sense organ system | 6.12e-33 | 12 |
head | 1.98e-30 | 13 |
ectodermal placode | 1.98e-30 | 13 |
pre-chordal neural plate | 2.84e-14 | 49 |
craniocervical region | 4.27e-11 | 36 |
neurectoderm | 6.42e-11 | 64 |
neural plate | 6.42e-11 | 64 |
presumptive neural plate | 6.42e-11 | 64 |
ecto-epithelium | 1.46e-09 | 73 |
anterior region of body | 2.69e-09 | 43 |
structure with developmental contribution from neural crest | 1.48e-07 | 92 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |